Pseudophryne corroboree (corroboree frog): 135006476
Help
Entry
135006476 CDS
T11513
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135006476 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135006476 (SMARCD1)
03036 Chromosome and associated proteins [BR:
pcob03036
]
135006476 (SMARCD1)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135006476 (SMARCD1)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135006476 (SMARCD1)
PBAF complex
135006476 (SMARCD1)
GBAF(ncBAF) complex
135006476 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
135006476
NCBI-ProteinID:
XP_063808095
LinkDB
All DBs
Position
2:complement(172141445..172188441)
Genome browser
AA seq
509 aa
AA seq
DB search
MAARAGFQSVTPGGSGPAAAALVPGTPGPAVRMGPAPGQGMYRSPMPGAAYPRPGILPGS
RMTPQGPAMGPPGYGGSPAARPGMAQSGMDQSRKRPPPQQIQQVQQQQAAQNRNHSTKKK
KMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFI
SNTFNPAKSDVEDGEGTVASWELRVEGRLLEDAALSKYDATKQKRKFSSFFKSLVIELDK
DLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLG
IHTQTRPVIIQALWQYIKTHKLQDPHEREFIISDKYLQQIFESQRMKFSELPQRLHALLM
PPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTSSQQEIAALDNKIHE
TIETINQLKIQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPW
AQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgggctggtttccagtcggtgactccggggggatccgggcccgcggcggcc
gcgctagtccctgggacgcccggcccagctgtgagaatgggccccgccccgggacaaggg
atgtaccgctccccaatgcctggagcagcttacccgaggccaggaattcttccaggcagt
cgaatgacacctcagggaccagctatgggacctccaggctatggagggagccctgctgct
cgaccaggcatggctcagtcaggcatggaccagtcccgcaagcgacctccacctcagcaa
atacagcaagtgcagcaacaacaggcagctcaaaataggaaccacagtactaagaagaag
aagatggcggataagattctacctcagaggattcgggagcttgtacctgaatctcaggct
tatatggatttgttggcttttgagaggaaattggatcagacaattatgaggaaacgtctt
gatattcaggaagccttgaaaagaccgatcaagcaaaaacggaaactccgtatctttata
tcgaacacttttaacccggcaaagtctgacgttgaggatggagaggggaccgtggcctca
tgggagttgcgtgtagaaggtcggcttcttgaagatgcagctttgtccaaatatgatgct
accaaacagaagaggaagttttcatcctttttcaagtctctggtcattgaactagacaag
gacttgtatggacctgataaccatctggtggagtggcacagaacgccgaccacacaggag
acagacgggtttcaggtcaaacgaccaggagacgtaaatgtgcgctgcactgtgctgctg
atgctggactaccagcctcctcagtttaagctggatccccggttggctcgtcttcttggg
atccacacgcagactcgcccggttattatccaagccctatggcagtatattaaaacacac
aaacttcaggacccacatgaacgagagtttataatcagcgacaagtatttacagcagata
ttcgaatctcaaaggatgaaattttccgagcttcctcagcgactccatgccctcctcatg
cctccggagcctatcataattaatcacgtcatcagtgtggatcccaatgaccagaagaag
acggcgtgttatgatattgatgttgaggtggatgataccttgaaaacccagatgaattcc
ttcctgttgtctacgtccagccaacaagaaattgcagctttggataacaagatccacgag
actattgaaactattaatcagctgaagattcagagggaattcatgttaagctttgcacgt
gaccctcaaggattcatcaacgactggctacagtctcagtgccgtgacctcaagacaatg
accgacgttgtgggcaatccagaagaggagcgcagagcagagttttatttccagccatgg
gctcaggaagccgtatgtcggtacttctactccaaggtgcagcaaagacgtcaggagttg
gagcaagccctggggattagaaacacataa
DBGET
integrated database retrieval system
