Pseudophryne corroboree (corroboree frog): 135010966
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Entry
135010966 CDS
T11513
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob00260
Glycine, serine and threonine metabolism
pcob00630
Glyoxylate and dicarboxylate metabolism
pcob00670
One carbon pool by folate
pcob01100
Metabolic pathways
pcob01200
Carbon metabolism
pcob01230
Biosynthesis of amino acids
pcob01240
Biosynthesis of cofactors
pcob04981
Folate transport and metabolism
Module
pcob_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
135010966 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
135010966 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
135010966 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
135010966 (SHMT2)
Enzymes [BR:
pcob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
135010966 (SHMT2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
135010966
NCBI-ProteinID:
XP_063808494
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Position
2:complement(227586372..227743410)
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AA seq
495 aa
AA seq
DB search
MLPFSLRRLAQPLRRCCHVRAQHTQPASQAGNQWNGQESLSENDPEMWNLVQQEKDRQCR
GLEMIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDKIELLCQQRALDAFRL
DPQKWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDVKRISATSIY
FESMPYKLNPATGLIDYDQLEVTARLFRPKLIIAGTSAYARLIDYARMRKVCDDVKAYLL
ADMAHISGLVAAGVIPSPFDHADVVTTTTHKTLRGARSGLIFYRKGTKSVDKKTGREIPY
NLEDKINFSVFPSIQGGPHNHAIAAVAVALRQASTSMFREYAIQVLKNAKSMAAALLEKG
YTLVSGGTDNHLVLVDLRPKDMDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGAP
ALTSRNFREADFEKVVDFIDEGIQIGLDVKSKTSKLQDFKNFLLEDHDTVQRIADLRQRV
EKFARVFPMPGFEER
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttctctttacggcgcttggcccagcctctacggagatgctgccatgttcgg
gcccagcacacacagccagcatcccaggctgggaaccagtggaatggacaagaaagtctg
tcagaaaatgaccctgaaatgtggaatcttgtgcagcaggagaaggacaggcagtgccgt
ggtctggagatgatcgcctctgagaatttctgcagtcgagcagctctggaagcccttgga
tcctgtcttaacaataaatattctgagggttaccctgggaagaggtattatgggggggct
gaagtggtggataaaattgagttgctgtgccagcagagagctttggacgcattcagattg
gacccgcaaaaatggggtgtaaatgtgcagccgtattctggttctccagccaactttgca
gcatacacagctctgctgcaaccgcatgaccgcctcatggggcttgatcttccagatgga
ggacacctgactcatgggtacatgtctgatgtgaaacgaatatctgctacctccatatac
tttgagtccatgccttacaaactcaatccagcaacggggttaatagactatgaccagctg
gaggtgaccgcccgcctcttccgccccaaactcatcattgctgggaccagtgcctatgct
cgattgattgattatgccaggatgaggaaggtgtgtgatgatgtgaaggcctacctcctg
gcagatatggctcatatcagtggtctagtagcagcgggtgtcatcccatctccctttgat
catgctgatgtagtcaccaccacaactcacaagaccctacggggagccaggtcagggctt
atattttaccgaaaaggcacaaaatctgtggataagaaaactggaagagaaatcccgtac
aaccttgaggataaaataaatttttcggttttcccttccatccagggaggacctcacaat
catgcaatcgcagcggtggcagttgcattaagacaggccagtacttccatgttccgtgaa
tatgccatacaggtccttaaaaacgccaagtctatggcagcagccctactcgagaagggt
tacacactagtatcaggaggaactgataatcatctggttttagtagacttgagacccaag
gatatggatggtgcacgagcagagagggtgctagaacttgtgtctataactgccaacaag
aacacatgtcctggagataagagtgctctcactcctggaggtctgcggctaggtgcccct
gctcttacatcccggaacttcagagaggccgactttgaaaaagtggttgattttattgat
gaaggtatccagattgggctcgatgtgaagagcaagacatccaagctccaagatttcaag
aattttcttcttgaagaccacgacacagtgcagcggattgcagatctacgtcagcgtgta
gagaaatttgcacgtgtgttccctatgccaggatttgaggaacgctag
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