Pseudophryne corroboree (corroboree frog): 135018437
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Entry
135018437 CDS
T11513
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcob03000
]
135018437 (SOX21)
Transcription factors [BR:
pcob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135018437 (SOX21)
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Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
DUF8598
Motif
Other DBs
NCBI-GeneID:
135018437
NCBI-ProteinID:
XP_063809089
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All DBs
Position
2:complement(339535759..339537964)
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AA seq
271 aa
AA seq
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MAKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTETEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPMPYSLAGDHEGLKASGLHGAGMLTD
SLLSNPEKAAAAAAAAAARVFWPQSAAAAAAAAAAAAGGANSPYSLFDLSSKMAEITSSS
SGLSYASSLGYPPSSGGGFPGVAAAAAAAAAASGGHTHSHPSPGNPGYMIPCNCTGWPSP
GLQPPLAYILFPGMGKPQLDPYSTTAYAAAL
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggctaagccggtggaccatgtgaagagacccatgaacgccttcatggtgtggtccagg
gcacagaggaggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cggctgggggcagagtggaagctgctgacggagacagagaagagacccttcattgacgag
gctaagaggctgcgcgccatgcacatgaaggagcacccggactacaagtaccggccccgc
aggaagcccaagaccctgctgaagaaggacaagttcgcattccccatgccttacagcctg
gcaggggaccatgagggtctgaaggcctccgggctacacggggcagggatgctcactgac
tccttattgtccaatccggagaaagctgctgctgccgccgctgcggccgccgccagggtc
ttctggcctcagtctgcggcagctgctgcagcagccgcagcagcggcagccggcggcgct
aacagcccctattccctgtttgacctgagctcaaaaatggcagagatcacatccagctct
tccggcctctcttacgcttcatctctgggatacccaccctccagtggtggtggcttccct
ggggtggcagctgcagctgctgcagccgcagctgccagtggaggtcacactcactctcac
ccttctcccggaaaccctggctatatgatcccatgtaactgcactgggtggcccagtcca
ggactacaaccccctctagcctacatcctattcccgggcatgggcaaacctcagttggac
ccttactccacgacagcgtatgcagcagctttatga
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