Pseudophryne corroboree (corroboree frog): 135030521
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Entry
135030521 CDS
T11513
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03020
RNA polymerase
pcob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135030521
09124 Replication and repair
03420 Nucleotide excision repair
135030521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135030521
03400 DNA repair and recombination proteins [BR:
pcob03400
]
135030521
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135030521
DNA repair and recombination proteins [BR:
pcob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135030521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
135030521
NCBI-ProteinID:
XP_063810011
LinkDB
All DBs
Position
2:492612775..492646929
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEQKITITKDTKVPNACLFTINKEDHTIGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPEYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccccggccttcgagtccttcctgctgtttgaaggcgagcagaagataaca
atcactaaggacacaaaagtaccgaatgcctgtttgtttaccataaacaaggaagatcat
acaattggaaatattattaaatcccagctgttgaaagatcctcaagttctgtttgcagga
tacaaagtaccacatcctctggagcataaaattataataagagttcaaacaacacctgaa
tacagtccccaagaggcgtttactaatgccatcacagacttaataagtgaactgtccctt
ttggaggaaagatttagggttgctataaaagacaagcaagaaggcattgaatga
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