Pseudophryne corroboree (corroboree frog): 135044616
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Entry
135044616 CDS
T11513
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04514
Cell adhesion molecule (CAM) interaction
pcob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135044616 (NFASC)
04517 IgSF CAM signaling
135044616 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcob04515
]
135044616 (NFASC)
Cell adhesion molecules [BR:
pcob04515
]
Immunoglobulin superfamily
L1 family
135044616 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_PDGFR_d4
Ig_4
Ig_6
Fn3_VIN3
Fn3_ROS1
CBM49
DUF4998
Motif
Other DBs
NCBI-GeneID:
135044616
NCBI-ProteinID:
XP_063811290
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All DBs
Position
2:complement(692609513..692795339)
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AA seq
1328 aa
AA seq
DB search
MKPHSSSWITFILFFLKLACTIDVPLDPNIQRDLLQPPTITKQSVKNYIVDPRDNIFIEC
EAQGNPHPTFTWTRNGKFYNVAKDPKVSFRRRSGTLIIDIYGGGRPEDYEGEYQCFARNR
HGTALSNKILLQVSRSPLWPKENLDPVVVNEGASLTLQCNPPPSLPPPVIFWMSSSMEPI
TQNRRVSQGLNGDLYFSNVLREDALTDYSCNARSHFTHTIQQKNAYTLKVLTTREVPERT
PTFLLPTGTSSTKLVLRDEDLLLECIASGVPTPEIMWYKKGGELPSQKLKFENFNKTLRI
TPVSEEDSGEYFCQASNRMGSIRHTISVRVKAAPYWLDEPRNLILAPGENGRLVCRANGN
PKPTIQWLINGDAIPAGAPNPNFEVAGDTIIFREVQSGNSAVFQCNASNTHGYLLANAFI
SILDVASRVLGPRNQLIRVIEYNRTQLDCPYFGSPIPTLRWFKNGQGSNLDGGNYRVHEN
GTLEINVVRKEDQGKYTCVATNILGNAENTVRLEVKEPTRIIKGPEDQIARRGSSVRLDC
RIRSDPSLRLTVTWMKDDNQLYISSRMKKEDDALTIFGVAEKDQGSYTCVAKTELDQDFA
KAYLTIQETSSSPTSRLTSVQRDKPDPPMDLELTDLAERSVRLTWIPGDDNNSPITGFIV
QFEEDRYQPGTWHNMASVPGNVNSALLHLSPYVNYQFRVLALNDLGSSMPSPSSERYQTT
GASPEVNPSDVRGVGNRKDNMEITWTPLNSTQTYGPNLRYNVKWRQRHTGEAWSNVTVWT
NRHVVWNTPVFTPYEIRVQAENEFGRAPEPNTVIGFSGEDYPKAAPTDIKLRVMNSTAIS
LQWTRVASASIQGSLLEYRAYYWRESSLLKGLWVSRKKQQQSFIGDRVRGVVSYLIPYSN
YKLYLVAVNGRGDGPKSDIKEFTMPEGAPSQPKTFRVSEPNQEVIMVEWSPPEHPNGNLT
GYNLYYYAFNGSRRSTPVTETLSPNQTKYTVKRRDPISRYYFSLTARTQVGASKPVTAET
PLRQDEVPPTSVPPTSPAPVTDAPTEMPTLPPATPSDTSTVHTTTSTVKPTTKAVPATIG
TDSWQTTVTTIHEIATTEQPIWNITALPNSHWANITWMHNLGPGSEFMVEYIDSNNMNRT
VPVKAHPTSIQLFDLVPGMTYRVRVYSRNHHSVTSPYVTFETSSAYTKNQVDIATQGWFI
GLMCAVALLVLILLIVCFIKRSRGGKYPVREKKEVALGTEDQKDEDGSFDYSDEDNKPLQ
GSQTSIDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKDETEGNESSEATSP
VNAIYSLA
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcactccagttcatggataacttttatccttttcttcctgaagctggcttgc
actattgatgtacctctggacccaaatattcagcgagaccttcttcagcccccaactatc
accaagcagtctgtgaagaattatattgttgatccacgtgataatattttcattgagtgt
gaagctcagggaaacccacatcccacatttacatggacgcggaatgggaaattttacaat
gtggccaaagatccaaaagtttcatttcgtaggaggtctggaaccctgatcatagacatt
tatggtggtgggcggcctgaggactatgagggagaatatcagtgctttgctcgcaacagg
catgggacagctctttccaataagatcttgctgcaagtctctagatccccattgtggcct
aaagaaaacctggaccctgttgttgtgaacgagggggcttccctcactctgcaatgcaac
cctccccccagtctccctcctccggtcatattctggatgagcagctccatggagccaatt
acacagaacagacgagtgtctcagggtctgaatggggatctgtacttctctaatgtcctg
cgtgaggatgcactgaccgattacagctgcaatgctcgctcccatttcacacacaccatc
caacagaagaatgcgtacactctcaaagtgctgaccacccgtgaggtaccagaaagaacg
ccaacattcttgctacccacaggtacttctagcaccaagttggtgctgcgtgatgaagat
ctgctcctagagtgtatcgcctctggcgtaccaactccggaaataatgtggtacaagaag
ggaggggagctccccagtcagaaactgaagtttgagaatttcaacaagactctacgcatt
acgcccgtgtctgaagaagacagtggagagtatttttgccaggcatccaacaggatgggc
agcatcaggcacaccatttcagttcgggtgaaggctgctccttattggttagatgagccc
aggaacctgatcttagccccaggagaaaatggtcgattggtttgtcgtgccaatggaaat
cctaagcctacgattcaatggctgataaatggagatgccatcccagcaggagctccaaac
cccaactttgaggtcgctggtgacaccatcatcttccgtgaagtgcagagtggtaacagt
gcagtgtttcagtgcaatgcctccaacactcatggctatctgctggctaatgccttcatc
agcatccttgatgttgcctcacgggtcctgggtcctcgcaatcagctaataagagttatt
gaatacaacagaactcagctggactgcccatactttggctctcctattcccacacttcgt
tggtttaagaatggacagggcagcaatttggacggaggaaattacagagtgcatgagaac
ggcacgctggagatcaatgttgtgcggaaggaggatcaaggcaaatacacctgtgttgct
accaacatccttggcaatgctgaaaatactgtgcgtctagaagttaaagagcctacccgc
attattaagggtccagaggatcagattgctagacgaggctccagtgtgcgcctggactgt
cgtatcaggagtgacccatcactcagactgactgtcacttggatgaaggatgataatcaa
ttatacataagtagcaggatgaagaaagaagatgatgccctcacaatattcggagtagca
gagaaggaccagggatcatacacgtgtgtggccaaaacagagctagatcaggactttgct
aaagcctatctcaccatccaggaaacgtcctcctcacccactagccgactgacatcagta
caaagagataaaccagaccctcccatggacttggagctaactgaccttgcggagagaagt
gtccgtctcacctggattccaggtgacgataataacagtccaataacaggtttcattgta
cagtttgaggaggaccggtatcagccagggacctggcacaacatggcgtctgtccctggt
aatgtgaactctgctcttcttcacctctctccatatgtcaactaccagtttcgtgtactg
gcgctgaatgaccttggtagcagcatgcccagcccatcctctgagcgataccagaccacc
ggagcatccccagaggttaatccaagtgatgttcgtggagttggcaatcgcaaagacaac
atggagattacatggacaccgctgaactccacacagacatatggtccaaacctacgatac
aatgtaaagtggcgccagcgtcacactggggaggcctggagcaatgttacagtttggacc
aacaggcacgttgtgtggaacactccagtgttcaccccttatgaaataagagtacaggca
gaaaacgagtttggcagggcaccagaaccaaacactgtgattggattctctggagaggac
tatcctaaggcagcaccaactgacataaaattgagggtcatgaacagcactgccatctcc
cttcaatggacccgcgtggcctctgcttctatccaaggaagtctcctggaatacagagca
tattactggagggagagtagtttgctgaagggtctctgggtctcccgaaagaagcagcag
cagagttttatcggggatcgtgtacgaggggtcgtgtcgtacctgattccttacagcaac
tacaaactatacttggtggcagtgaatgggcgaggagatggcccgaagagtgacattaaa
gagttcaccatgccagagggagcgcccagtcaacctaaaacatttagagtcagtgaacca
aaccaggaagtcatcatggtggagtggagtcctccagaacatcccaatggaaatctaaca
gggtacaacctgtactactatgcattcaacgggagcagaagatcaacacctgtgactgag
acactgtccccaaaccagacaaaatacacagtgaaaaggagagacccaatatcacgttat
tacttctccctgactgcaaggactcaggttggagctagtaagccggtcacagctgaaacg
cccctcagacaggatgaagttccccccacttcagttcctcccacgtctccagcacctgtc
actgatgctcccacagaaatgccaactcttcccccagccactcccagtgataccagtact
gtccacactacaactagtacagtcaaacccactacaaaagccgtccctgccactattggt
accgacagctggcagacaactgtgactaccatccatgaaatagccacaacagaacaacct
atttggaacatcacagctttgcccaacagccactgggcaaacatcacctggatgcataac
ttagggcctggctctgagtttatggttgagtatattgacagtaataacatgaacagaact
gttcccgttaaggctcatcccacctcaattcagctgtttgacctggtccctgggatgacc
tacagagtacgggtttattcccggaatcaccactcagtcacaagtccgtatgtgacgttc
gagaccagctcagcttacacaaagaaccaggtagacattgccacccagggctggttcatt
gggctcatgtgcgcagtcgctttgctggtgctcatcctgttgattgtatgcttcatcaag
aggagccgaggaggcaaatacccagtgcgggagaaaaaggaagtggctctgggtactgaa
gatcagaaagatgaggatggttcatttgactacagtgatgaagacaacaaaccacttcag
ggcagccagacttcaatagatggaaccataaagcagcaggaaagtgatgacagtcttgtg
gattatggagaaggaggagaaggacagtttaatgaggatggctcttttatagggcagtat
actgtgaaaaaagacaaggatgagacagagggtaatgaaagttcagaagccacttcacca
gtgaacgctatctattctctggcatag
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