KEGG   Pseudophryne corroboree (corroboree frog): 135047172
Entry
135047172         CDS       T11513                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
pcob  Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcob00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135047172 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcob03041]
    135047172 (BCAS2)
   03400 DNA repair and recombination proteins [BR:pcob03400]
    135047172 (BCAS2)
Spliceosome [BR:pcob03041]
 Complex B
  Other components
   Prp19 complex
    135047172 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    135047172 (BCAS2)
DNA repair and recombination proteins [BR:pcob03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    135047172 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 Flagellar_rod EzrA YhjD PMD1-like KxDL PIN-TPR-GreABC Island Cep57_CLD ENTR1 PRKG1_interact
Other DBs
NCBI-GeneID: 135047172
NCBI-ProteinID: XP_063811498
LinkDB
Position
2:complement(751597919..751700648)
AA seq 223 aa
MAGTSLVAGDVVVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDYSA
FETEIMRNEFERLASRQPLELLSMKRYELPAPSSGQRNDITAWQDCVNNSMAQLEHQAVR
IENLDIMSQHGCNAWRVYNENLVRMIESAQKDLQKLRKRIQDLNWQRKNSQLTSGAKLRE
MESTWVSLVSKNYEIERAIVQLENEINQLKQNDGENKENIQDY
NT seq 672 nt   +upstreamnt  +downstreamnt
atggcgggcaccagtctggtggctggagatgtggtggtggacgcgttaccgtattttgat
cagggatatgatgctcccggagtacgggaggcggcagctgctttggtggaagaggagacc
agacgatatcgtccaacaaaaaattacctaagctacttaccaactccagattactctgca
tttgagacagaaattatgaggaatgagtttgagagactagcgtcacgccagccacttgaa
cttctcagcatgaagagatatgaattgcctgctccttcttcaggtcagaggaatgatatt
actgcgtggcaggattgtgtcaataactccatggctcaactggagcaccaggctgtgcgc
attgagaatctggacatcatgtcgcagcacggctgtaacgcatggagagtctacaacgaa
aatcttgtccgtatgattgagtctgcacaaaaggatcttcaaaagttaagaaaaaggatt
caggatttgaactggcaaaggaaaaactcccaacttacatctggggctaagctcagagag
atggaatcaacgtgggtatcgcttgtgagtaagaactatgagattgaacgtgcaattgta
cagctggagaatgaaatcaatcaactcaagcagaatgatggggaaaacaaagagaatatc
caggactattaa

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