Pseudophryne corroboree (corroboree frog): 135049901
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Entry
135049901 CDS
T11513
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135049901 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pcob03036
]
135049901 (SUPT6H)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135049901 (SUPT6H)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135049901 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
135049901
NCBI-ProteinID:
XP_063811954
LinkDB
All DBs
Position
2:864130753..864419201
Genome browser
AA seq
1730 aa
AA seq
DB search
MSDFVESEAEESEEEYTEDGEVVQRTTKKFVEEEDDEEEEENLDDQDEQGNLKGFINDDE
DEEEEEEEEGGSESGGSEDEIGHKIRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVKK
MSDDEDEEEDAGKEEHEKEAIAEEIFQDGEDDGRHESVEQPIIAHEEEEEEEEEESDIDD
FIVDDDGQPLKKPKWRKKLPGYADAALQEAQEIFGVDFDYEEFEKYNEDDEEMEGYDYED
EEGEGETRVRPKKTAKKRVSRRSIFEIYEPSELESSHLTDQDNEIRTTDLPERFQLRNIP
VKSAEDDELEEEADWIYRNAFATLTISQQETCDYLERGQVGSSFSRKGPSTIQKIREALN
FMRNQHFEVPFIAFYRKEYVEPELNINDLWRVWQWDEKWTQLRVRKQNLMRLFQKMQAYQ
YEQISADPDKPLADEVRPLDTTDMERLKDVRSMDELRDVYNHFLLYYGRDIPKMQNAAKS
NQKKLKRIPEEGDEEGAEAVEQEDEEQKGPELKQASRRDMYSICQSAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSTAEGVLEGARYMVALQIAREPLVR
QVLRQTFQERGKINVVPTKKGRKEIDEAHFAYAFKYLKNKLVKELRDDQFLKMCIAEDEG
LITIDICIDMKDVEGFGNEQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERALKHFLYP
QMGKELKSKLLLEAKDFVIKSCSRKLYNWLKVAPYRPDQQVEEDDDFMEESQGKGLRVLG
IAYSSARDHPVFCALINGEGDVTDFLRLPYFTKRKNAWREEERERKAHDMETLKKFLISK
KPHVVAISSENRDAQMMIEDVKRIVHELEQGQQMSSIGVEMVDNELSNLYMNSKKSECDF
RDYPPVLREAVSIARRIQDPLIEFSQVCSTDDDILCLKLHPLQDHVVKEELLNSLYYEFI
NRVNEVGVDVNKAISHPYTQSLIQYVCGLGPRKGAHLLKVLKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTNSLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPFRS
ANPEEVFNILTRETPETFYIGKLITCNVVGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKARLDNGVTGFIPTKFISDKVVKRPEERVKVGMTV
HCRIMKINIEKFSVDMTCRTSDLMDKNNEWKLPKDTYYDFDTEAAHQKQDEELKKKQQRT
TYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSEGIYQHVDV
KEEGKENAFSLGSTLWINTEEFEDLDEIIARFVQPMASFARDLVSHKYYQDCNCGDKKKL
EELLIKTKKEKPTFIPYFISASKELPGKFLLGYQPRAKPRVEYVTVTPEGFRYRGQMFST
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASMSATPANINLADLTRAVNALPQNMTSQM
FNAIAAVTGQHGQNPNATPAQWASSQYGYSGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYATPSQPMATPQYHQLPPSATPTPAPTPQSSHSQSSSSSSSRHRQQSKTNSHAAIDWGK
MAEQWMHEKEAERRKQKQRLTPRPSPSPMIESTPMSVAGDATPLLDEMDR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttgtagaaagtgaagcagaagagtctgaggaagagtacactgaagatggg
gaggttgtacagagaaccacaaagaagtttgtggaagaggaggatgatgaggaagaggag
gaaaatctggatgaccaggatgaacaagggaatttgaagggttttatcaatgatgacgag
gatgaggaggaggaggaagaagaggaaggaggaagtgagtctggaggctcagaagatgaa
attggccacaaaataagaaaacgcacatttgatgaccgattggaagatgatgattttgat
ctcattgaagaaaacttgggtgtgaaagtgaagcgtcaaaagttcaggcgagtgaaaaag
atgtctgatgatgaagatgaggaggaagatgcaggaaaggaggagcatgaaaaagaggca
attgctgaggaaatcttccaggatggtgaagacgatggcaggcacgagtctgtggaacag
ccgattattgcccatgaggaggaggaagaagaggaggaagaggaatctgacattgatgat
ttcattgttgatgatgatgggcaaccattgaaaaaacccaaatggaggaaaaaacttccg
ggatatgctgatgctgctttacaggaagctcaagagatctttggtgtagattttgattat
gaagaatttgaaaaatacaatgaggatgacgaggaaatggaagggtatgactatgaggac
gaggaaggagaaggtgagacacgagtgcgtcctaagaaaactgctaagaagcgtgtgagc
agacgcagcatctttgaaatttatgaacccagtgaactggaaagcagccatctgaccgac
caggacaatgagatccggaccacagacctgccagaaagattccagctgcggaacatacct
gtcaaatctgctgaagacgatgagcttgaagaagaggcagactggatttacagaaatgca
tttgcaacactgactatctctcagcaggaaacctgtgattacctggaacgagggcaggtt
ggcagcagcttcagccgcaagggacctagcaccatacagaagatcagagaagctctaaac
ttcatgaggaatcagcactttgaggtgccatttattgcattctacaggaaagagtatgtg
gaacctgaactcaacattaacgacttgtggcgtgtgtggcagtgggatgagaagtggacc
cagctcagggtgcgaaaacagaatctgatgcgtctgtttcagaagatgcaggcttatcaa
tatgagcagatctctgcggatccagacaagccattagcagatgaagtacgacctttagat
accactgatatggagaggttgaaagatgtacggtcaatggatgaactaagggatgtgtat
aaccacttcttgctgtactatgggagagatattccaaagatgcagaatgcagcaaagtcc
aaccagaagaaactaaaacgcatccctgaggagggagatgaggaaggagctgaagctgta
gagcaagaagatgaggagcaaaaggggccagagttaaagcaggcttcacgtagagatatg
tattcaatctgccaaagtgctggtctggatggcttggcaaagaagtttggtctgacacca
gagcagtttggcgagaacctgcgagacagttaccagcgtcacgagactgagcagtttcca
gctgagcctctagaacttgctaaagattatgtgtgcagtcagttcagtacagcagaggga
gtgctggaaggggcccggtacatggtcgctttgcagattgctagggagccgttggtcaga
caggttttaaggcagacctttcaagaaagaggcaagatcaacgttgttccaaccaagaaa
ggcagaaaggaaattgatgaagcccattttgcatatgccttcaaatatctgaagaacaaa
cttgttaaggagcttagagatgaccagtttcttaagatgtgcattgcagaagacgaaggt
ctgatcaccattgatatctgcattgatatgaaggatgttgagggctttggcaatgaacag
acctacttcgaggagatcaagcagttctattacagagatgagttcagtcaccaggtgcag
gagtggaacaggcagcggacactggccatcgaacgtgccctgaaacatttcctctaccct
caaatgggtaaagagttaaaaagcaaacttcttctggaggccaaagattttgtaataaag
tcttgtagccgaaagctgtacaactggcttaaagtggcaccataccggcctgaccagcaa
gtggaggaagatgatgacttcatggaggagagccagggaaaaggactccgtgtactgggc
atcgcctactcctctgccagggatcaccctgtgttttgtgccctcattaatggagagggt
gatgtgacagacttcctgcgtttgccgtactttaccaagaggaaaaatgcttggagggaa
gaggaaagagaacgaaaggcccatgacatggagactctgaaaaagtttttgataagcaag
aagcctcatgttgttgccatttccagcgagaatcgggatgcacagatgatgattgaagat
gttaagcgcattgtacatgagcttgagcaaggacagcagatgtcttctattggtgtagaa
atggtggacaatgagctgtccaatttatacatgaacagcaaaaagtctgaatgtgacttt
cgagattacccaccagtgttacgtgaggcggtctccattgctcggcgtatccaggaccct
ttgattgaattttctcaggtctgcagcacggatgacgatatcttgtgtctgaaactgcac
ccattacaggatcatgtagtgaaagaagaattgctgaattccctgtattatgagttcatc
aaccgagtaaatgaggtgggagtggatgtcaacaaggctatttctcatccatacacccag
tccctcattcagtatgtgtgtggacttggaccacgtaagggtgctcacctgctgaaggtt
cttaaacaaaacaatacacgtctggaaaatcgcacccaattagtcactatgtgtcatatg
ggtcccaaagttttcatcaactgtgctggcttcattaagattgacaccaactcccttgga
gatagtactgattcctatattgaagtcctggatggctctcgagtgcaccctgaaacgtat
gaatgggctcgaaaaatggcagtagatgctttggagtatgatgagtctgcagaagatgcc
aacccagcaggagctctggaggaaattctcgaaaatccagagagactgaaagaccttgac
ttggatgcatttgcagaggaacttgagagacagggttatggagataaacatattacgcta
tatgatattcgtgctgagctcagctgcagatacaaagaccttaggacacctttccggtca
gctaaccctgaagaagtctttaacatactgaccagggaaacaccagagactttctatata
ggtaaactgataacctgtaatgtagtagggattgcacacagaagaccccaaggagaaagt
tatgaccaggctatcaggaatgatgagacaggcctgtggcagtgtccattttgtcagcag
gataacttcccagagctcagtgaggtatggaatcattttgacagtggctcctgtcctggg
caagctattggtgtgaaagccaggctggacaatggagtgactggcttcatcccaaccaag
ttcatcagtgataaagtggtaaagcgccctgaagagagagtaaaggtgggcatgactgtc
cattgtcgaataatgaaaatcaacattgagaagttcagtgttgatatgacttgccgaaca
tctgatctgatggacaaaaacaatgaatggaagttgccaaaggacacctactatgatttt
gatacagaggccgcacatcaaaagcaagatgaagaactgaagaaaaagcagcagcgtaca
acttacataaagcgagtcatcgcccatccttcttttcacaatattaatttcaagcaagct
gagaagatgatggagacaatggatcaaggagatgtcatcatccgaccaagtagtaaaggc
gaaaaccatttaacagtcacatggaaggtcagcgaaggcatctaccagcatgtggatgtt
aaagaggaggggaaggagaatgccttcagcctggggtccactctctggattaacactgag
gaatttgaggacctggatgaaattattgcccggtttgtccaaccgatggcttcttttgca
agagatctagtcagccacaagtactatcaagactgtaactgtggagacaagaagaaactt
gaagaacttttaataaaaaccaagaaggaaaagccgacattcattccatatttcatctct
gctagtaaggagctccctgggaaattcctcctgggatatcagcctcgagctaaaccaaga
gtggagtatgttactgtaacaccagaaggctttaggtataggggacagatgttttctaca
gtcaatggacttttccggtggtttaaagatcactaccaggaccctgtaccaggtatcacc
ccaagcagcagcagcagaactagaactccggcctccatgagtgccacgcctgccaatatt
aaccttgctgatctgactcgcgctgtcaatgccctgccacaaaacatgacctcgcagatg
tttaatgctattgctgcagttactggacaacatgggcagaaccccaatgccacacctgca
caatgggcatccagccagtacggatacagtggaggcagcggaggtggcagcagtgcatat
catgtttttacaaccccagcacagcagcctgtggctacccctctgatgactccaagttat
tcttatgccacccccagtcagcctatggcaacaccacagtatcaccagctgccgccaagt
gccacgcccaccccagcacctactccacagtcctcccattcacaaagttcgtccagctcc
agttcccggcacagacaacagtccaaaacaaacagccatgcggctatcgactggggcaaa
atggcagagcagtggatgcatgaaaaagaggcagaaagacggaaacaaaagcagcgctta
acccctcgtccttctccaagtcctatgattgagagtacgcccatgtctgtcgcaggggac
gccacaccactacttgatgaaatggaccgatga
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integrated database retrieval system
