Pseudophryne corroboree (corroboree frog): 135054310
Help
Entry
135054310 CDS
T11513
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcob
Pseudophryne corroboree (corroboree frog)
Pathway
pcob04137
Mitophagy - animal
pcob04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135054310
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135054310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
135054310
03009 Ribosome biogenesis [BR:
pcob03009
]
135054310
04131 Membrane trafficking [BR:
pcob04131
]
135054310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcob04147
]
135054310
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135054310
Ribosome biogenesis [BR:
pcob03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135054310
Membrane trafficking [BR:
pcob04131
]
SNARE
SNARE associated proteins
Others
135054310
Autophagy
Aggrephagy
Other aggrephagy associated proteins
135054310
Exosome [BR:
pcob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135054310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
NB-ARC
nSTAND_NTPase5
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
135054310
NCBI-ProteinID:
XP_063813624
LinkDB
All DBs
Position
1:21710555..21736085
Genome browser
AA seq
805 aa
AA seq
DB search
MASGSDTKVDDLSTAILKQKSRPNRLIVDEAINEDNSVVSLSQCKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCPDEKIRMNRVVRNNLRVRLGDVMSIQPYPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKAN
LRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGGQGG
AGPSQGTGGSAGGSHFAEEEDDLYG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggatcagacaccaaagtggatgatttatccaccgcaattctgaagcagaag
agccgacccaatcgtttaattgtagatgaagcgatcaatgaagacaacagcgtggtttct
ctgtcccagtgtaagatggacgagctgcagctgttccgcggagacaccgtcctcctgaag
gggaagaagaggcgagaagctgtttgcatagtcctgtctgatgacacctgcccggatgag
aagatccgtatgaacagggtggtccgtaataacctgcgggtgcggctgggagatgttatg
agcattcagccgtatcccgatgtgaagtacggcaagcggatacacgtgctgccaatagat
gacacagtggagggcattaccggcaacctgtttgaagtttatctcaaaccttatttcctg
gaagcctacaggccaatcagaaaaggtgacatcttcctggtccgtggcgggatgcgtgcg
gtggagttcaaggtggtggagacagatcccagcccgtattgtatcgtcgccccagatact
gtgattcactgcgaaggagagcctattaaacgagaggatgaggaggagtctctaaatgaa
gtgggctatgacgacatcggtggctgcaggaagcaattggcccagatcaaagagatggtg
gagcttccgctgagacacccggcactatttaaagctattggcgtgaagcctccccgagga
attctgctgtacggcccccctggaaccggcaaaaccctcattgcccgagctgtcgctaat
gaaaccggcgcgttcttcttcctcattaatggtcctgagattatgagtaaactggccggc
gagtctgagagcaacctgcgcaaagcctttgaggaagcggagaagaacgcccccgccatt
atcttcatagacgaactggacgccattgcccctaagagagagaagactcacggagaagtg
gaacgtcgtattgtctctcagctgctaacacttatggacggtctgaaacagagagcacat
gttatagtgatggctgccacaaacagacccaacagcattgacccggcacttagacgtttt
ggccgctttgacagagaggttgatattgggatccctgatgctaccggcaggctggaaatt
ctacagatccacaccaagaacatgaaattggctgatgatgttgatctagaacaggtcgct
aatgaaacccacggtcacgtgggagccgatctggctgctctgtgctctgaggccgctctc
caagccatccgcaagaagatggacctcattgacctggaggatgaaactatagatgctgaa
gtgatgaattcattggctgtcaccatggatgacttcaggtgggcactaagtcagagtaac
ccctcagcgctgcgtgagaccgtggttgaggtaccacaggttacttgggaggatataggt
ggcttggaagatgtgaagagggagctgcaggagctggttcagtaccctgtggaacatcca
gacaagttcttgaagtttggaatgaccccatctaaaggcgtactgttttatggacctcct
ggatgtggtaaaactttgttagccaaggccattgccaacgaatgtcaagccaacttcatc
tctatcaaaggccctgagctgctcaccatgtggttcggagagtctgaggccaacgtccgg
gagatctttgacaaggctcggcaagctgctccctgtgttttgttctttgatgaattggac
tccattgccaaggcccgtggtggtaacattggtgatggtggtggagctgctgacagagta
attaaccaaatcctgacagagatggatggtatgtctaccaaaaagaatgtcttcatcatt
ggagccaccaacagaccggacatcattgaccctgccattctgcgtcccggacgtctggac
cagctcatctacatccccttgccagacgagaagtcccgtattgctatcctgaaggccaat
ctgaggaagtctccagttgccaaggatgtggatgttgacttcctggccaagatgaccaat
ggtttctctggggctgacctgacggaaatttgtcagcgggcctgcaagctggccatccgg
gagtgcattgagaatgagattaggagagagcgggagagacagacaaacccttcagccatg
gaggtggaagaagatgaccctgtacctgaaatccgccgtgatcactttgaggaagccatg
cgcttcgcccgccgctcagtcagtgacaatgacatcagaaaatatgaaatgtttgcacag
accttgcagcagagccgtggcttcggcagcttcagatttccctctggaggccagggagga
gcaggcccaagccaaggcacaggcggcagtgctggtggaagtcactttgctgaagaagaa
gacgacctctacggctag
DBGET
integrated database retrieval system
