Pseudophryne corroboree (corroboree frog): 135055005
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Entry
135055005 CDS
T11513
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcob03000
]
135055005 (SSRP1)
03036 Chromosome and associated proteins [BR:
pcob03036
]
135055005 (SSRP1)
Transcription factors [BR:
pcob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
135055005 (SSRP1)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
135055005 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
135055005
NCBI-ProteinID:
XP_063814622
LinkDB
All DBs
Position
3:complement(164190224..164305269)
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AA seq
702 aa
AA seq
DB search
MADTLEFNDIYQEVKGSMNDGRLRLSKTGLMYKNSKTGKVENIAAADLSEGVWRRVALGY
GIKLLTSAGHVYKYDGFREAEYEKLSDYFKTHFRVDLVEKDLCVKGWNWGSVRFGGQLLS
FDLGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGGDSAEA
FAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPSFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFAKDEDITLTLNMSEEEVEKRFEG
KLKKDMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGAQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKKPYDDYADSDDEQQHDAYLERMKEEGKIRENADSDDSGDETDESF
NPGEEEDEVAEEFDSNPSNSSSSAGSDDDEGEKKKKAKKAKIVKERKPRKKAKEGKKVKD
PAAPKRPMSAYMLWLNASREKIKSENPGISIIDLSKKAGEIWKGMTKDKKEEWDRKAEEA
KRDYEKAMKEYNENASSEAPKKEKKSKKEKPSGKAEKTSGKSEKRKSVKPASPVRTPVKT
NTVKSKEFVSSDESSSDESTHKKGSDEEMASTPASSNESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgttggagtttaacgacatttaccaggaggtgaaagggtcaatgaatgat
ggacggctgcgtttatccaagactggcctcatgtataagaacagcaagacggggaaagta
gaaaacattgcagctgctgacctgtcagagggtgtatggcgacgtgttgccctaggttat
ggcatcaagttgttaaccagtgcaggccatgtgtacaaatatgatggtttccgggaggca
gaatatgagaagctatctgattacttcaagactcactttcgggtggatctggtagaaaag
gacctctgtgtgaaaggatggaactggggtagtgtgaggtttggaggacagctgctctca
ttcgatttgggagatcagccggcatttgagctccctctcagtaatgtctctcagtgcacc
actggaaagaatgaagtaacgctggaattccaccagaatgatgactctgaggtatctctc
atggagatacgcttctatgtccctccaacgcaggatgatggaggggactccgcagaggct
tttgcacaaaatgtcttatctaaggcagatgtgatccaggcaacaggtgatgcagtttgc
atattccgagagctgcagtgccttactccacgtggtcgttatgacatacgcatatacccc
tccttcctacaccttcacgggaaaacttttgactataaaattccatacacaactgtactg
cgtctcttcttactgccacacaaggaccaaagacagatgttttttgtgatcagcctggat
cctccaattaagcaggggcaaacccgttaccacttcttaatcctgcttttcgcaaaagat
gaggacataacgttgaccctcaacatgagcgaagaagaagttgaaaagcgttttgaagga
aaactaaagaaggacatgtccggctgtttgtacgagatggttagtcgtgtcatgaaggcc
cttgtaaaccgcaagatcacagttcctggaaatttccaaggacactctggagcacagtgt
atcacatgctcttacaaagccagctcaggactactgtatcctctggaacgtggcttcata
tatgtccataaaccacctgtccacatccgctttgatgaagtcaactgtgtcaactttgca
cgtggtaccacaacaacgcgttcctttgactttgaaatcgagacaaagcaaggagcacag
tatacgtttagcagcattgaaagggaggaatacgggaaactctttgactttgtgaatgcc
aagaaactgaacatcaaaaatagaggcctgaaagagggtatgaagaagccatatgatgac
tatgccgattctgatgatgaacagcagcatgatgcttatttggaaagaatgaaagaggaa
gggaaaattcgggagaacgcagatagcgatgactccggagatgaaactgatgaatccttt
aatcctggagaagaggaagatgaagttgcagaagaatttgacagtaacccctcaaacagc
tcatccagtgctggtagtgatgatgatgagggggagaaaaagaagaaagccaagaaagct
aaaattgttaaagagcgcaaaccacgcaagaaagcaaaggagggtaaaaaagtgaaagac
ccagctgctcccaaacgccctatgtctgcatacatgttgtggctgaatgcaagtcgtgaa
aaaataaaaagtgagaatccagggatcagcattattgacctgtccaagaaagctggagag
atctggaagggcatgaccaaggacaagaaggaggaatgggaccgtaaagcagaggaggcc
aagcgcgattatgagaaagcaatgaaagaatacaatgagaacgcatcatctgaagccccc
aaaaaggaaaagaaatcgaaaaaggagaagccctcaggaaaggctgagaagacctctgga
aagtcggagaagaggaaatctgtaaaaccagcatctcctgttagaacaccagttaagacg
aacacagttaagagcaaagagtttgtgtccagtgatgagagtagttctgatgaaagcaca
cacaagaagggatcagacgaagagatggccagtactcctgctagttccaatgaatccggc
tctgactag
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