Pseudophryne corroboree (corroboree frog): 135055010
Help
Entry
135055010 CDS
T11513
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03040
Spliceosome
pcob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135055010 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135055010 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcob03041
]
135055010 (PRPF19)
04121 Ubiquitin system [BR:
pcob04121
]
135055010 (PRPF19)
03400 DNA repair and recombination proteins [BR:
pcob03400
]
135055010 (PRPF19)
Enzymes [BR:
pcob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135055010 (PRPF19)
Spliceosome [BR:
pcob03041
]
Complex B
Other components
Prp19 complex
135055010 (PRPF19)
Complex C
Prp19-CDC5 complex
135055010 (PRPF19)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
U-box type E3
135055010 (PRPF19)
DNA repair and recombination proteins [BR:
pcob03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
135055010 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
U-box
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
PROPPIN
Beta-prop_SPT8
Cytochrom_D1
Beta-prop_VPS8
Beta-prop_DCAF12
zf-Nse
Nucleoporin_N
BCAS3_WD40
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
ATG16
Motif
Other DBs
NCBI-GeneID:
135055010
NCBI-ProteinID:
XP_063814625
LinkDB
All DBs
Position
3:165189210..165346538
Genome browser
AA seq
503 aa
AA seq
DB search
MSLTCYISNEVTDRPCVSPLSGHVFDRRLIEKYLAENGTDPVTNQPLNEEQLIDIKVAHP
IRPKPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGISVQANPTPQAGAAGSTEAMDLGELVGMSAEIIQKLQDKAT
VLTTERKKRGKTVPEDLVKPEELSKYHQVSSHVGLHSASVPGILALDLCPTDTNKTLTGG
ADKSVVVFDATSQQILATLKGHTKKVTSVVFHPSQELVFSASPDSTIRVWSVPGVSCVQV
LRAHEGAVTGLSLHATGDYLLSCSDDQYWAFSDIHAGRVLTKVTDETSGCALTCAQFHPD
GLIFGTGTMDSQIKIWDLKERSNVANFPGHSGPVSCVAFSENGYYLATAADDSSVKLWDL
RKLKNFKTLQLEEGYQVQSLVFDQSGTYLAVGGTDIQVYICKQWAEVLHFTDHSALTTGL
AFGQNAKFLASTGMDRSLRFYSL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgacatgctatatcagtaacgaggtcacagaccgtccttgtgtctctcccttg
tcgggtcacgtgtttgatagacgcctcatcgagaaatatttggctgaaaatgggacagat
ccagtgaccaatcagcctttgaatgaagagcagctgattgacatcaaagttgcccaccca
attcgccctaagccaccatctgctaccagtatcccagcaatcttgaagtctctgcaggat
gaatgggatgctgtaatgctgcatagctttactctgcgacagcagctacagaccactcgc
caagaactttctcatgctctctatcaacacgatgctgcttgtcgtgtcatagcccgtctc
accaaggaggtaacagctgcacgtgaagctctggcgactctgaaacctcaggctggcatt
tctgttcaggccaatcctacaccacaagcaggggcagctggctctacagaagccatggat
ttgggagaactggtgggaatgtcagcggagatcatacagaagcttcaagacaaagcaact
gtgctcaccacggagcgtaagaagcggggcaagactgtcccagaggatctagtgaaacca
gaggagctgagcaagtatcaccaagtctcgtcccacgtggggctacacagtgccagtgtc
cctggcatcttggctttggatttgtgtcctacagacaccaacaaaaccctcacaggcgga
gcagataagagtgtggtggtgtttgatgctacatcgcagcagatcctggcaacacttaaa
ggtcacacaaagaaggtcaccagtgttgtgttccacccttcacaggagctagtgttttct
gcctctcccgactctactatacgtgtctggtctgtgccaggggtttcctgtgttcaagtg
ttaagagctcatgaaggtgcagtgactggtctgagtttacatgcaactggagattaccta
ttgagctgctcagatgaccagtattgggcattctctgacatccatgcaggacgtgttctt
accaaagtaacagatgagacatcaggatgtgctttaacctgtgctcaattccatcccgat
ggactcatttttggcactgggaccatggactctcaaattaagatctgggatctaaaggaa
cgatctaatgtggcaaactttcctggccattctggtcctgtatcatgtgtggcattctca
gaaaatggatattacttggcaactgccgctgacgactccagtgtcaaattgtgggatttg
cgaaaactaaagaacttcaagactctgcaactggaggagggataccaggtgcagtccctg
gtgtttgatcagagtggtacgtacttggcagttggagggacagatatccaagtttatatc
tgcaagcagtgggctgaagttttgcatttcacagatcacagtgcactgaccacaggcctg
gccttcgggcagaatgcaaagtttttggcatccacaggaatggataggagtctacgcttc
tacagcctttga
DBGET
integrated database retrieval system
