Pseudophryne corroboree (corroboree frog): 135055053
Help
Entry
135055053 CDS
T11513
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04510
Focal adhesion
pcob04517
IgSF CAM signaling
pcob04518
Integrin signaling
pcob04519
Cadherin signaling
pcob04520
Adherens junction
pcob04810
Regulation of actin cytoskeleton
pcob04820
Cytoskeleton in muscle cells
pcob05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135055053 (VCL)
04518 Integrin signaling
135055053 (VCL)
04519 Cadherin signaling
135055053 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135055053 (VCL)
04520 Adherens junction
135055053 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135055053 (VCL)
04810 Regulation of actin cytoskeleton
135055053 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135055053 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcob04812
]
135055053 (VCL)
04147 Exosome [BR:
pcob04147
]
135055053 (VCL)
Cytoskeleton proteins [BR:
pcob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135055053 (VCL)
Exosome [BR:
pcob04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135055053 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DASH_Spc34
Motif
Other DBs
NCBI-GeneID:
135055053
NCBI-ProteinID:
XP_063814715
LinkDB
All DBs
Position
3:179477403..179612935
Genome browser
AA seq
1146 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPELTAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACAKLVQAAQMLHADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVENMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRIMLVNSMNTVKDLLPVLISAMKIFVTTKNSRSHGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKLGQAKGWLRDPNAPPGDVGEQAVR
QILDEAGKVGELCAGKERKDILGTVKTLGQMTDQVADLRARGQGATPIAMQKAQQVSQGL
DLLTAKVENAARKLEALTNSKQAIGKKIDAAQSWLADPNGGPEGEENIRSILAEAKKIAE
LCEDPKDREDILRSLGEIAALTAKLSDLRRQGKGDSPEARALAKQIATSLQNLQTKVNRA
VGNSRPVKAAVNMEGKVEQAQRWIDNPSVDDRGVGQAAIRGLVAEGRRLANSMMGPYRQD
MLARCDRVEQLAGQLAEMASRGEGDTPQARAVAAQLQDALKDLKGKMQEVMTQEVSDVFS
DTTTPIKLLAVAATSPPDAHNREEVFEERAANFENHAARLGATAEKAAAVGSANKSTVEG
IQAAVKSSRELTPQVVSAARILLSNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDIDKCKVAMANMQPQMLVAGATSIARRANRILLVAKKEVENSEDPKFR
EAVKNASDELSKTISPMVLEAKAVAGNISDPALQKGFLDSGYRILGAVAKVREAFQPPEP
EFPPPPPDLEHLRLTDEAAPPKPPLPEGEVPPPRPPPPEEKDEDFPEQKQGEVVNQQMMV
AARQLHDEARKWSSKSPGSPAPATPQGREAAVSAVEQEREEEEEEEASVEFALSSDIEDD
YEPELLLVPEGQPVNQSMLAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGG
SGNKRALIQCAKDIAKASDEVTKLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILST
VKATMLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFALRWAR
KTPWYQ
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgttccacaccaagaccatagagagtatcctggagccggtggcccagcagatc
tcccacctggtcataatgcatgaagaaggggaggttgatggcaaggccataccggagctc
acagcacctgtggctgctgtgcaggcagctgtcagcaaccttgtgagggtaggtaaagag
accgtccaaaccactgaagatcaaatcatgaaaagagacatgcctcctgcattcatcaaa
gtagaaaatgcctgcgctaagcttgtccaggctgcacagatgctgcatgcggatccatac
tccgttccagcccgcgattatcttattgatggctctcgtggaatactctctggcacttca
gacctgctcctgacatttgatgaagctgaggtgaggaaaatcataagagtgtgtaaaggt
atcctggagtatttgacggtggcagaggttgttgagaacatggaggatctggtcacttac
accaagaacttggggcctggaatgacaaagatggcgaaaatgattgatgaacgtcagcag
gagttgacccaccaggaacatcggatcatgctcgtaaattccatgaacactgttaaagac
ctgctgccagtcctgatctctgctatgaagatctttgtgacaaccaagaactcccgcagt
catggtattgaagaagctctcaaaaatcgcaacttcacagtggagaagatgagtgcagag
attaatgaaattatacgtgtcctgcaacttacgtcttgggatgaagatgcttgggccagc
aaggacacagaggccatgaagagggcacttgcactgattgattcgaagttgggccaggca
aagggctggctgagggacccaaatgctcctccaggtgatgtcggagagcaagccgtccgc
cagatcctagatgaggcagggaaagttggtgagctgtgtgcagggaaggagaggaaggac
atcctgggaacagtcaagactctaggacagatgactgaccaggtggctgatctaagagca
aggggacaaggtgctactcctattgcaatgcagaaagcacagcaggtatctcagggacta
gatctcctaacagctaaagtagagaatgctgcccgtaaattggaagccctaacaaactcc
aagcaggcgattgggaaaaagattgatgctgcccagagttggctggcagatcccaatggt
ggtccagaaggagaggagaacatccgaagcatcctagctgaggctaagaagattgctgag
ctgtgtgaggatcccaaagacagagaggacattttgcgctccttaggggagatagcagct
cttactgccaagctgtctgacctccgtcggcagggaaaaggagactccccagaagcacgt
gctttagccaagcagatagcaacttcgctgcagaacctgcaaactaaggtaaaccgtgct
gtgggcaacagccgccctgtgaaagcagcagtaaacatggaagggaaagtggagcaggcc
cagcgctggattgacaacccctctgtggatgaccggggagtgggtcaggctgccattcgt
gggctagtagcagagggtcgtcgcttggccaactctatgatgggaccttatcgccaggat
atgttggcaagatgcgatcgtgtggagcaactagcaggacagcttgcggagatggcatca
cggggtgaaggagacacaccccaggcacgcgctgtggctgctcagctgcaggatgcgctg
aaggatttgaaggggaaaatgcaggaggtgatgacacaagaggtgtctgatgtttttagt
gacactactactcctatcaaactcctagccgtggcagccacttctcctcctgacgcacac
aacagagaagaggtctttgaagagagagctgccaactttgagaaccacgcagctcgcctg
ggagccacggcggagaaagcagcagctgtgggatcggctaataaatccactgtggaaggg
atacaagcagctgtgaagtcctccagggagctaacccctcaggttgtgtctgctgctcgc
attctgttgagtaaccctgggaaccaggctgcctatgagcattttgaaaccatgaaaaat
cagtggattgataatgtggagaagatgacaggcctggtagatgaagccattgacacaagg
tcactgttggatgcatcagaagaagcaatcaagaaagatatcgacaaatgtaaggtggcc
atggccaatatgcagccccaaatgttggttgctggagctaccagtattgctcgccgtgca
aaccgcattttgttggtggccaaaaaggaggtggagaactctgaggatccaaaattccgt
gaggccgtaaagaatgcgtcagacgaactcagtaaaaccatatctccaatggttttggag
gccaaagctgtagcaggcaacatttctgacccagctttacagaaaggtttcttggactcg
ggttacaggattttaggagctgtggccaaggtgagggaagcattccagcctccagagcca
gaattccctccacctcctcctgacttggaacatctgcggttgactgatgaggccgcacct
ccaaagccgccacttcctgaaggagaggttccacctcccaggccgccacctcctgaggag
aaggacgaggacttcccagagcagaagcagggcgaggtggtgaaccagcaaatgatggtg
gctgcaagacagcttcacgatgaagctcggaagtggtccagcaagtcacccggaagccct
gctcccgctaccccgcagggtagagaagctgctgtgtctgcggtagagcaggagcgtgag
gaagaggaggaggaggaggcatcagtggagtttgctctctcctctgacattgaagatgat
tatgagccagagctcctcttagtgcctgagggtcagcctgttaaccagtcaatgctggcc
gcagctcagtctttgcatcgggaagctaccaaatggtccagtaagggtaacgacatcatt
gcagcagccaaacgcatggctctgctcatggcagagatgtctcggcttgtgagaggaggc
agcgggaacaagagagccctgattcagtgtgccaaggacattgctaaagcttcagatgag
gtgaccaaattggccaaagaagtggctaaacagtgcacagataagcggatccgcaccaac
ttgttacaggtgtgcgagaggatcccaactatcagcacccagctaaagatcctcagtacc
gtcaaggccactatgctgggaaggaccaacattagtgatgaagagtctgagcaggcaaca
gaaatgcttgtccacaatgctcagaacctgatgcagtcagtaaaagagactgtgcgagag
gctgaagctgcatcaatcaagatccgaacagatgctggattcgcactgcgttgggcccgt
aaaactccatggtaccagtaa
DBGET
integrated database retrieval system
