Pseudophryne corroboree (corroboree frog): 135055616
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Entry
135055616 CDS
T11513
Symbol
SPOP
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135055616 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcob04121
]
135055616 (SPOP)
Ubiquitin system [BR:
pcob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
135055616 (SPOP)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
135055616
NCBI-ProteinID:
XP_063815933
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Position
3:complement(368707406..368747244)
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEIKDVEPDVFKEMMCFIYTGKASNLDKMADDLLAAADKYALERLKVMCEEALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgagtaccaagtccccctcccccggctgagatgtccagtggtcctgtggctgaa
agctggtgttatacacagataaaggttgtaaaattttcatacatgtggacaatcaacaat
ttcagcttctgtcgtgaggaaatgggcgaggtgataaagagctccaccttctcctcagga
gccaatgataaactgaaatggtgcctacgagtaaatcctaaaggattggatgaagagagc
aaggattatttgtccctctacctgcttctggtcagttgtccaaaaagcgaggtgcgcgct
aaattcaaattctccatcctcaatgccaaaggggaggagactaaggcaatggagagtcag
cgggcataccgcttcgtacagggaaaggactggggctttaagaaattcatccgcagagat
tttttgcttgatgaggcaaatggcctgctcccagatgacaagctgacactgttctgtgag
gttagtgttgtccaggactctgtaaacatctccggccagaatacaatgaacatggttaaa
gtaccagaatgtcgcctagccgatgagcttggaggactgtgggagaattcgcgtttcact
gactgctgcctgtgtgtggccggacaggagttccaggcacacaaagccatccttgcagca
cgatctccagtgttcagtgcaatgtttgagcatgaaatggaagagagtaagaagaatcgc
gtggagataaaagatgtggaaccggatgtcttcaaggaaatgatgtgttttatatacact
gggaaggcatccaaccttgacaagatggctgatgatcttcttgctgctgcggacaagtat
gctctagagcgtctgaaggtgatgtgtgaggaagctttatgtagcaacttgtcagtggaa
aatgctgcagagattctgattttggctgatttacacagtgctgaccagctgaaaacacag
gctgtggacttcatcaactaccacgcctctgatgtcatggaaacttcgggatggaaatct
atggtggtctcacacccgcacctggtagcagaagcataccgttccctggcctctgcccag
tgcccattcttgggtccacctcgaaagcgcctgaagcaatcctaa
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