Pseudophryne corroboree (corroboree frog): 135056206
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Entry
135056206 CDS
T11513
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135056206 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcob03036
]
135056206 (NIPBL)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
135056206 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
HEAT_GCN1_C
Cnd1
Cnd3
MIF4G
Motif
Other DBs
NCBI-GeneID:
135056206
NCBI-ProteinID:
XP_063817152
LinkDB
All DBs
Position
1:82550880..82869974
Genome browser
AA seq
2934 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEP
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQATLARNPNVFREKSMQNRYAVQS
GMMMPQYKLPQNSMHGSPASSNYQPTTISHSPSSRFVPPQTSSTNRFIGQQNSPVPSPYA
PQSPAGYIPYPHPGSYTQRQQMQQTSVSSPILAGGLRNLHENKVSGQLSGNSANHHTDNS
RHSNSEDYLQMVHRLGSEDSDSSIRNAASFSLQSPQSVCSPAGSDGTPKVSRQLMLQSQP
PPYTSPRDAPPDILLDSPDRKLKRQKKLKMSKDEKEATEKSAMYDIISSPSKDSTKLTLR
LSRVRSSEMDQQGDILSSMENSNVSEGDSSFNVQYPGQTSKTPVTPQDISRPLNSAACFQ
EQTEFMQVQQVPVLQPNTSATAKPSQPPVAPSQTPQTGNITPYDEVELDALAEIERIERE
SAIERERFSKEVQDKDKPLKKRKQDSYPLEAGGATGGNRPASQETSAAGNGSRPAALMVS
IDLLHAGRGDSQATVTQDSDVVKKPEEAKPCNDGPVSATPEDPVVVPKNIPEIHPGTPRK
KSESEAESLEKSIKSTPAKQPAEGTQEESVKESKPCDIKAEPPENIEEAMICEDSKNEAK
PEICEKSCEDNPVESKTGAMLPEDVKTETPLGDATKESKPCDKPCDKPCDKPCDKPCDKP
CDKPEDMKLNESVKDSNKDENKQEQKQRPSTPKQRGEGKSDNPKQKSEGRQDAAPRQKSD
GKPEQPRQKSEGKSEPSKPTGDGKPDTAKQRTDGRTDNPKQKTDGRQETPKNKNEGKPET
PKQKNDGRPETPRQRSEGRQESHRQKSDDRPVMTRQKSDGRTETPKHRHDNRRDSIRLSS
DKKTDSSKHKTDSKSVSPRLKPESRSDGTKQRVDGRPGHESSRRDSENPKQKAEDKSDAD
KHRGDSPRVRRPESLRSFNKNEPDSKPGNKPDPSKTDKSERKHRNDSDESKDRLSSGEQK
LRPGSPRIRSDSKPDPSKSKPDKSALRSPQNKDEKRTDGNKSKVDGNKTHGDNKAGFTSR
MLGGSQGTLKNFVIPKLNRDKDGKVTQDPKRLELKREQRDDKKGFVEDLNKGAKPVVVLQ
KLSLDEVQKLIKEREDKSKGSFKSNKNKPSKSSKGGIDQSVLKELPPELVAEIESSMPLC
ERVKMNKRKRSTVNEKPKYAEISSDDDRESEEDFEPSKKRHKKNRADEEWKCEERERRSS
GDHRRSGNDNRRSSRYRERSPEDSDMEESPPPSLSEVARKMKKKEKQKKRKAYEPKLTPE
ELMDSSTFKRFSSAVENILENLEDMDFTTFGDDEEIPQDLLLGKHQLTELGSESAKIKAM
GIMNKISSEKMVKLLGILEKNIQDGSKLSSMLNHNNDTEDEEKLWRDLIMERVTKSADAC
LTAINIMTSPSMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGLMSSKAK
RAKCSTHKQRVIVMLYNKVCDIVASLSELLEIQLLTDTTILQVSSMGITPFFVESVSELQ
LCTIKLVTAVFSRYEKHRQLILEELFTSLARLPTSKRSLRNFRLNSSDDDGEAMYIQMVT
ALVLQLIQCVVHLPSDRDNPEEESNKKIDQDVFITNSYETAMRTAQNFLSIFLKKCGSKQ
GEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYL
GTVAARLRKDAVTSKMDQGSINRILKQSSEGDDEIQQLQKALLDYLEENTETDPSLVFSR
KFYIAQWFRDTTMETEKAMKSQKDEDSEGTHHAKEVESTGDIMRRAEKRKKFLRGIIRAA
PSQFSTLKSSSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMK
CLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYEMLV
ERILDTGISVRKRVIKILRDICLEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLW
FSPTPQNDKVAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPVKKACTQL
VDNLVEHILKYEESMADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTK
CSTQNDFMVICNVAKILELVVPLMEHPSETFLATMEEDLMKLIIKYGMTVVQHCVSCLGA
VVNKATQNYKFVWACFNRYYGALIKLKTEHQDDPNSTVLTTNKPALLRSLFTVGALCRHF
DFDQEDFKGSSKVNIAVNIKDKVLELLLYFTKHSDEEVQTKAIIGLGFSFIQHPILMFEV
EVKNLYNNILSDKNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKLSKQEDLKEMGDI
SSGMSSSIMQLYLKQVLEAFFHRQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDP
EPSMRNKADQQLVEIDKKYTGFIHMKAVAGIKMSYQVQQAIISDAKRIVRGFRQDESTSA
LCCHLYSMIRTNRQHRRAFLISLLNLFDDAARTEVNMLLYIADNLAGFPYQSQEEPLFIM
HHIDITLSVSGSNLLQSFRESMVQAGKPKKKTKQESSGEESSSESEEEVAKPRRSRRRAA
SDSDSDNEDDVDHVLSCLPSESAPLIEFANASQGILLLLMLKQHLKNLCGFSDSKIQKYS
PSESAKVYDKAINRKTGVNFHPKQTLEFLKRDVTCTKINDDIKRTIAKQYLDFKLLMEHL
DPDEEEEEGEVSASTDARNKAITNLLGGNSPKNNVAETEEEESDGEEKAGGTSGLRKSKR
LSDSSDMGAQMNETVEAQDVIAICCPKYKDRPQIAKVIQKTSHGYRVQWMAGSYSGTWVE
AKRRDGRKLVPWVDTIKESDIIHKKIALTSANKLTNKTAQTLRSLYAAKDGTSS
NT seq
8805 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattacgactctagcgggaattgctagtctcaca
gacttattgaaccagctgcctcttccatctcctttacctgctacaactacaaagagcctc
ctctttaacggacggatagcagaagaggtgaactgccttctggcgtgcagggatgaacct
ctggtgtcacaacttgtccatagcctcaatcaggtgtcaacagatcacatagagctgaag
gataacctgggaagtgatgatccagaaggagatataccggtcctgctgcaggccacactg
gccagaaatcccaatgttttcagggaaaagagtatgcagaacagatatgcagtgcagagt
gggatgatgatgcctcagtataaacttccccagaattccatgcatggcagcccagcatct
tccaattatcaaccaaccactatctctcatagcccttccagtcgatttgtgccacctcag
accagttcaacaaatcggtttatcggccagcaaaacagccccgttcctagtccttatgct
cctcaaagccctgcaggatatataccatacccccacccaggaagctacacgcaacgtcaa
caaatgcaacaaacttctgtttccagtccaattttggcaggtggtttgaggaacctgcat
gaaaacaaagtctccggtcagttgtcgggtaactctgcaaaccaccacacggacaattcc
agacacagcaacagtgaagactacctgcagatggtacaccggctgggcagcgaggatagt
gattcttcaattaggaatgctgcctcgttttctctacaatcccctcagtctgtgtgttct
cctgcgggaagtgatgggacaccaaaagtctcaagacagttaatgcttcagtctcagcct
cctccgtacacctccccgcgagacgctccccctgacattctgctggactcgccagacaga
aaactgaaaagacaaaaaaagttaaagatgagcaaagacgagaaggaggcaacagagaag
tcggctatgtatgacatcattagctccccttctaaggactctaccaagctcacattaaga
ctgtcacgagtgagatcttcagaaatggaccagcaaggagacattctctccagcatggag
aacagtaatgtctcagaaggtgactcctctttcaatgtgcagtatcctgggcagacgtca
aaaacgccagtcactccacaggacataagtcgccccttgaattctgctgcttgtttccaa
gagcagacagaattcatgcaagttcagcaagtgcccgtcctacaacccaatacgtctgca
acggcaaaaccgtctcaacctcccgtggctccgtcacaaaccccacaaacaggaaacata
acgccatacgacgaggtggaactggacgctctggcagagatcgaaaggatagaacgcgaa
tctgccatcgagcgggaacgcttttctaaagaagttcaggataaagataaacccttaaag
aagaggaagcaagactcctacccattagaagctggaggtgctactggaggaaacagacca
gcttcccaggagaccagtgctgcaggaaatgggtcacggccagcagctttaatggttagc
attgatcttctgcatgccggcagaggggactctcaggcaactgtaactcaggactcagac
gtagtaaagaaaccagaagaagcaaaaccttgtaatgatggacctgtttctgcaactcca
gaggaccctgttgtagtccctaaaaatatccctgaaattcacccagggacaccgagaaag
aagtcggagtctgaagctgagagtcttgagaagtccatcaaaagcacacctgcaaagcaa
ccagctgagggtacgcaggaggagtcggtgaaagaaagcaaaccgtgcgacatcaaggcc
gagcctccagagaacatagaggaagcgatgatttgtgaagacagcaaaaatgaggcaaag
cctgaaatatgtgagaagagttgtgaggacaacccagtggagagtaaaacaggagcaatg
ttaccggaggacgtaaagacagagacaccccttggtgatgccacaaaagagtccaaaccc
tgtgacaaaccctgtgacaaaccctgtgacaaaccctgtgacaaaccctgtgacaaaccc
tgtgacaaaccagaggatatgaaactaaatgaaagtgtcaaggactctaataaagatgag
aataagcaggagcagaaacagaggcccagtaccccaaagcagcgaggtgaaggaaagtct
gacaatcccaaacaaaagtctgagggaaggcaagacgctgcaccaagacagaagagtgat
ggtaaaccagaacaaccgaggcaaaagagtgagggcaagtctgaaccatccaaaccgaca
ggagatggaaagcctgatacagccaagcagcggacggatggacgtactgataatcctaaa
cagaaaactgatgggcgtcaagagactcccaaaaataaaaatgaaggtaagccagaaaca
cctaagcaaaagaacgatggccgacctgaaacaccaaggcaaaggagtgaggggcgacag
gaaagtcacagacaaaagagcgatgaccgccctgttatgactaggcaaaaaagcgatggg
cgcacagaaaccccaaaacacagacatgataaccgaagggactccatcagactctcatct
gacaagaaaacggattcatccaaacacaaaaccgattccaagagcgtatctcctaggctc
aagcctgagagccgctctgatgggacaaagcagagagtagatgggaggccaggtcatgag
tcttcgcggcgcgattccgaaaatccaaaacaaaaagcagaggacaagagtgatgcagat
aaacacaggggagattcgccaagggtcaggaggccagagtctttgagatcatttaacaag
aatgaaccggattcgaaacctgggaataaacctgatccatccaaaacggataaatctgaa
cgaaagcatcggaacgattcagatgagtcgaaggacaggctttcttctggagaacagaaa
ctaaggcccggaagccctcggattagatctgacagtaaaccggatcccagtaaatccaaa
ccagataaatctgcattaagatcgcctcaaaataaagacgagaaaaggactgatggtaac
aaaagtaaggtggacgggaataagacgcatggtgacaacaaagcggggtttacaagtcgt
atgttgggtgggagtcagggtacactgaaaaactttgtcattccaaaactcaatcgggat
aaggatggcaaagtcacacaggatcctaaacggttggaattaaaaagggaacagagagat
gataaaaagggttttgtggaagatctaaataaaggagcaaagccggtggtggttcttcag
aagctgtctttggatgaagtacaaaaattgattaaggaaagagaggacaagtccaagggg
tccttcaagtccaataaaaacaagccatcaaaatccagcaaaggaggcattgatcagtct
gtcctgaaggagcttcctcccgagttggtggctgaaatcgagtcatccatgccactgtgt
gaacgcgtgaagatgaacaaacgcaagcgcagcactgtaaacgagaagcccaaatacgca
gagattagctctgatgatgaccgcgaaagtgaagaagattttgagccttccaaaaaaaga
cacaaaaaaaatcgggccgatgaggagtggaaatgtgaagagcgggaaagacgcagttcc
ggggatcacaggcgcagtggaaatgacaataggcggagcagtcgctacagagagcgtagt
ccagaagactccgacatggaagagtcgccacctccgagcctcagtgaagtggctcggaaa
atgaagaagaaggagaagcagaagaagaggaaagcttatgagcctaaactaacacccgaa
gaattgatggattcctcaacatttaagagattttcttcagcggtagaaaatattttggag
aatttggaagacatggacttcacgacatttggtgacgatgaggaaatccctcaagacctt
ctgctggggaaacatcagttgacggagctgggcagcgagtctgctaaaatcaaagctatg
ggtattatgaataaaatctcttctgaaaaaatggttaagttacttgggattcttgagaag
aacatccaagacggctccaagctttcctctatgttgaaccataacaatgacacagaagat
gaggaaaaactgtggcgggatctgataatggagcgagtcacaaagtcagccgatgcctgt
ttgacagcgatcaacataatgacgtcaccgagtatgcccaaggcagtttatatcgaggat
gtgatagagcgtgttcttcaatacactaaatttcacttacagaacacactttacccacag
tatgatcctgtctatagggtggatccacatggaggcggattaatgagttcaaaagcaaaa
cgcgccaagtgttcaacccataagcagagggtcattgtgatgctgtacaacaaagtgtgc
gacattgtggccagtttgtcggagttgctagagattcagctacttactgacaccacgatc
ctgcaggtttcttcaatgggaattacaccattctttgtggaaagtgtcagtgagttgcag
ctgtgcaccatcaagctggttactgcggtattttccaggtacgaaaagcacagacagctg
attctggaggagctcttcacctcacttgcaaggctgccaacaagtaaaagaagcctgcga
aattttaggttaaacagcagcgatgatgatggggaagctatgtacatccagatggtaact
gcgctggttcttcagctaatacagtgtgtggtgcacctaccatcagatagggataatcca
gaagaagagtccaacaagaaaattgatcaggatgttttcatcaccaactcgtatgaaacc
gccatgaggaccgcacagaattttctgtccatttttctcaaaaagtgtgggagcaagcag
ggggaggaggactaccggccactgtttgagaactttgtacaggaccttctatctactgtg
aacaagcctgagtggccagcagccgagctcttgctgagcttgttggggcgactcttggtc
catcaattcagtaacaagtcaacagagatggcgctacgtgtagcctcactggattacttg
ggtacggtggctgcgcggctcaggaaggatgccgttaccagcaagatggaccaaggatca
ataaacagaatcttaaaacagtcatctgagggtgatgatgagattcagcagctgcagaag
gctttattagactatctggaggagaacacagagacggacccatctttagtgttttctcgg
aagttttatatagctcagtggttccgtgacactacaatggagacggagaaagccatgaaa
tcccagaaggatgaagactcagaaggaacgcaccacgcaaaagaggttgagtccacggga
gacattatgcggcgagcagaaaagcgcaaaaagttccttcgtggcatcattagagcagcg
ccatcacagtttagcactttgaagtcaagttctgacaccgtcgactacgatgatgcatgt
ttgattgtgcgatacttggcctccatgaggccgtttgcccagagctttgatatttatttg
acccagattctgcgggtactaggggagaatgcaattgcagtccgaacgaaagccatgaag
tgtttgtctgaagtggtagctgtagatccaagcatacttgccaggttggatatgcagaga
ggcgttcatggcaggctgatggacaactcgaccagtgtgcgagaagcagcggtggagtta
ttgggacgatttgtgctgtgtaggcctcagcttgccgagcagtattacgaaatgctggtt
gagaggattctggacactggtattagtgtaaggaagagggtaataaagatcttgcgagat
atctgcttagagcaaccaacgtttccaaaaatcacggagatgtgtgtcaagatgatccgc
agagtcaacgatgaagagggcattaagaaactagttaatgaaacattccagaaactctgg
ttctcaccaaccccccagaatgataaagttgcaatgaccaggaagatcctgaacataaca
gatgtggttgcagcgtgcagggacacgggctatgactggtttgaacaacttcttcagaat
cttttaaaatcagaagaagatgcctcatacaagcctgtgaagaaagcctgtactcagttg
gttgacaacctggtagaacacattctcaagtatgaggagtctatggctgattccgacaac
aaaggtgtgaactcgggtcgcttggtggcttgcattaccactctgttcttattcagcaag
atcaggcctcagctgatggtgaaacacgcaatgaccatgcagccgtaccttaccactaaa
tgtagtactcagaatgatttcatggtaatatgcaacgttgccaagatcttggagctggtt
gtgccactaatggagcaccccagtgagaccttcctggccactatggaggaggatctcatg
aagctcatcatcaaatatggcatgacggtagtacaacattgtgtgagctgtctaggggcc
gttgtaaacaaagcaacacaaaattataagtttgtctgggcctgttttaatagatattat
ggtgcgctaataaagttaaaaacggaacatcaggatgacccaaatagcacagtcttaaca
acaaacaaaccagctctcctaagatcgctttttactgttggagcactttgtcgccatttt
gattttgatcaggaagacttcaagggtagcagcaaagtaaatattgcagttaacataaaa
gacaaagttttggaactgctgttgtattttaccaagcactcagatgaagaagttcagaca
aaagccattattggtctcgggttttcattcattcagcatccaattctcatgtttgaagtg
gaggtgaaaaatttatataacaacattctctctgacaagaacagctcagtgaacctaaaa
atccaagttctgaagaacctccagacctacttacaagaggaggacactcggatgcagcag
gcagacagagactggaaaaaattatcaaagcaggaagatctgaaagagatgggagatatt
tcctcagggatgagcagctctattatgcagctttacctcaaacaggtcttggaggcgttc
ttccacaggcaatccagtgtgcggcactttgctctcaatgtcatcgcattgactctgaac
cagggtctcatccatcctgttcagtgtgtgccctatctgattgcaatggggacagaccct
gagccatccatgcggaacaaagcagatcagcagctggtggaaatagacaagaaatacact
ggattcatccatatgaaagcagtggccggcatcaagatgtcctaccaggtgcagcaagcc
atcatttccgacgcaaagcgaatagtgcgtggcttccggcaggacgaatccaccagcgct
ctctgctgccatctttattcgatgatccggaccaaccggcagcacagacgcgctttcctg
atctccttactcaacctgtttgatgatgctgcgagaacagaagtaaatatgctcttgtac
atagcggacaatctagccgggtttccatatcaaagtcaggaggagcctctgttcattatg
catcatatagacattacattatcggtttctggtagcaatctattgcagtcatttagagag
tctatggtgcaagctgggaagcccaagaaaaaaaccaagcaggagtcatctggagaagaa
agtagcagtgaaagtgaggaagaggtggccaagccgagaaggtcgcggaggcgggcggcc
tcagattctgactcagacaatgaggacgacgtagatcacgtcctgagctgcctgcccagc
gaatctgctcctcttatagagtttgcaaatgcctcacaaggaattctcttacttctaatg
ttgaagcagcatttaaaaaacctctgtggcttctcagatagtaaaattcaaaagtattcc
ccatcagaatcggctaaagtgtatgataaggccataaaccggaaaacgggggtcaatttt
caccccaagcagactctggagtttctcaagagggacgtgacttgtacaaagattaatgat
gacatcaagaggacgattgctaaacaatatttggatttcaagttgctaatggaacattta
gaccctgatgaggaggaggaagaaggagaggtatcggcaagcacggatgctcgaaataaa
gccattaccaatttacttggtggtaacagtcctaagaataatgtggccgagacggaggaa
gaggaaagtgatggggaggagaaggctgggggcacgtcagggttaagaaaatcaaaaaga
ttatcagactcgtcagacatgggagcacagatgaatgagaccgttgaagcccaggatgta
attgcaatttgttgcccaaagtacaaggaccggccacagattgctaaagttattcagaaa
accagccacggatatcgcgttcagtggatggcgggctcctacagtggcacttgggttgaa
gccaaacggcgtgatggacgaaagcttgtgccttgggtcgatacaattaaagagtcggac
atcattcacaaaaaaatagctctaacgagcgcaaataagctgactaataaaactgctcag
actttacgatcgctgtatgcagccaaggacgggacttccagctaa
DBGET
integrated database retrieval system
