Pseudophryne corroboree (corroboree frog): 135056528
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Entry
135056528 CDS
T11513
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3
KO
K06099
cold shock domain protein A
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135056528 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcob03000
]
135056528 (YBX3)
03041 Spliceosome [BR:
pcob03041
]
135056528 (YBX3)
Transcription factors [BR:
pcob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
135056528 (YBX3)
Spliceosome [BR:
pcob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135056528 (YBX3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
DUF8529
OB_RNB
Rho_RNA_bind
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
135056528
NCBI-ProteinID:
XP_063817898
LinkDB
All DBs
Position
3:658507334..658540528
Genome browser
AA seq
248 aa
AA seq
DB search
MSEVTAEEPKPKAPGTDPSGAPAGTGEEDRKVLATKVQGTVKWFNVRNGYGFINRNDTKE
DVFVHQTAIKKNNPRKYLRSVGDGEVVEFDVVAGEKGAEASNVTGPKGAPVQGSRYAADR
RRYRRGYYGRRRGPPREGGDGEMKDGVPETIQAQQPMRQPTNYRGRYRRPVSQPRPVPPT
GENESTDNQYETGAPDQQQNRRGFRRPYNYRRRPDQVNAPAQGGKETTKLAESAAEKPVP
VVEKSNAA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtaacagctgaagaaccaaagcccaaagctccagggaccgatccaagtgga
gctcccgctggtacaggtgaagaagacaggaaagtattggcgacaaaagtccaaggaact
gtgaaatggttcaatgtgagaaatggctatggattcataaatcggaatgacaccaaagaa
gatgtatttgtccaccagacagcaatcaagaaaaataatcctcgcaaatacctgcggagc
gtaggggatggagaggttgtggagtttgatgttgttgctggggaaaagggcgccgaggca
tctaatgtaactggcccgaaaggggccccagttcaaggtagtcgctacgctgcagaccga
cgtagatatcgccgcggttactatggccgcagaagagggcccccaagggagggaggagat
ggggaaatgaaagacggtgtccctgaaacaattcaagcccagcaaccaatgcgccaacct
accaactaccgtggaaggtatcgccgacccgtgtctcaacccagacctgttccacctact
ggggaaaatgagagcacggacaatcagtatgagacaggggctccagatcaacaacagaac
cgccgtgggttcagaagaccgtacaactatcggcgtcgacccgatcaagtaaatgctcca
gcacaggggggcaaagagacaactaagctggctgaaagcgctgccgagaagcctgtgcca
gtggttgagaaaagcaatgctgcgtaa
DBGET
integrated database retrieval system
