KEGG   Pseudophryne corroboree (corroboree frog): 135056557
Entry
135056557         CDS       T11513                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
pcob  Pseudophryne corroboree (corroboree frog)
Pathway
pcob04114  Oocyte meiosis
pcob04120  Ubiquitin mediated proteolysis
pcob04218  Cellular senescence
pcob04310  Wnt signaling pathway
pcob04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pcob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    135056557 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    135056557 (BTRC)
   04340 Hedgehog signaling pathway
    135056557 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    135056557 (BTRC)
   04218 Cellular senescence
    135056557 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcob04121]
    135056557 (BTRC)
   03036 Chromosome and associated proteins [BR:pcob03036]
    135056557 (BTRC)
Ubiquitin system [BR:pcob04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     135056557 (BTRC)
Chromosome and associated proteins [BR:pcob03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     135056557 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 F-box-like Beta-prop_Aladin Beta-prop_RIG_2nd CFAP251_N WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 PAC11 Beta-prop_IP5PC_F ASA1 Beta-prop_SPT8 NBCH_WD40 Beta-prop_DCAF4 TRM82_WD F-box Beta-prop_IFT140_1st WD40_like Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_WDR11_2nd Beta-prop_WDR35_TULP_N F-box_5 DUF4508
Other DBs
NCBI-GeneID: 135056557
NCBI-ProteinID: XP_063817965
LinkDB
Position
3:complement(672334608..672745484)
AA seq 561 aa
MYPVSASLTASEREDCHRDEPPRKIIPEKNTLRQTYNSCARLCLNQETVCLSGSAMKTES
CVVKTKLANGISSMIVPKQRKLSANYEKEKDLCVKYFEQWSECDQVEFVEHLISRMCHYQ
HGHINTYLKPMLQRDFITALPARGLDHIAENILSYLDSRSLCSAELVCKEWYRVTSDGML
WKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGKTPPNSFYRTLYPKIIQDIETIES
NWRCGRHSLQKIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRVLTGHTG
SVLCLQYDERVIITGSSDSTVRVWEVNSGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS
IAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG
HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLN
DPEALAESNRSPSRTYTYISR
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtatcctgtgtctgcatccctgaccgcttcagagagagaagattgtcatcgggatgaa
ccccctagaaagattattccagagaagaatacccttagacagacatacaacagctgtgcc
agattgtgtttaaaccaagaaactgtgtgcttatctgggtctgccatgaagacggaaagt
tgtgtggttaaaactaaacttgccaatggcatttctagcatgattgtgcccaagcagagg
aagctgtccgcaaactacgagaaggaaaaagatctctgcgtcaagtactttgagcagtgg
tcagagtgtgatcaagtggagtttgtcgagcatctaatctctcgaatgtgccactaccaa
catggacatataaacacgtacctaaagccaatgttacagagggattttatcactgcactt
ccagcccgtggattggatcacatagcagaaaatatcctgtcctacctggattccagatcg
ctgtgctctgcggagctggtgtgcaaggagtggtaccgagtgacatctgatggaatgctg
tggaagaaacttatagagagaatggtgagaacagactctttgtggagaggactggcagaa
aggagaggatggggtcagtatctgtttaaaaacaagccaccggatggaaagacaccaccc
aattccttctacagaacactttatcccaaaattatccaagacatcgagacgatagagtcc
aactggcgctgtgggcggcacagcttacaaaagattcattgtcggagcgaaacaagcaaa
ggagtctactgtttacagtatgacgaccagaagatagtgagcggcctcagagataatacc
atcaagatctgggataaaaatacattggagtgtaaacgagtactgacaggtcacactggg
tccgttctatgcctacagtatgatgagcgagtaatcattactggctcctcggactccaca
gtcagggtctgggaggtgaactcgggagagatgctaaatacactgatccaccactgtgag
gctgtgctacatttacgcttcaacaatggcatgatggtcacctgctccaaagatcgctcc
attgccgtgtgggacatggcttctgctaccgacatcacactacggagggtcctggttggc
catagggcagcagtgaatgtggtggacttcgatgacaagtacatcgtctccgcctctggg
gacaggactataaaagtgtggaacacaagtacatgtgaatttgtccgtacattaaacggt
cacaaacgtgggattgcttgcctgcagtaccgggataggctggtggtgagcggctcttct
gataatactatcaggttgtgggacattgaatgtggggcttgtttgcgggttctagaagga
catgaagaattggtacgatgcattcgcttcgacaacaagaggatcgtcagtggagcgtat
gatgggaaaattaaagtgtgggaccttgtggctgctttagatcctcgcgctcccgctggg
acactttgtctgcggacacttgtggaacattcaggaagagtttttcgcctacagtttgat
gagttccagatagtcagcagctctcatgatgacactatcctcatctgggactttctaaat
gacccagaagcacttgcggagtccaatcgttctccttctagaacatacacatacatctca
agataa

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