Pseudophryne corroboree (corroboree frog): 135056592
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Entry
135056592 CDS
T11513
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135056592 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135056592 (TAF5)
03036 Chromosome and associated proteins [BR:
pcob03036
]
135056592 (TAF5)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135056592 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
135056592 (TAF5)
Chromosome and associated proteins [BR:
pcob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135056592 (TAF5)
STAGA complex
135056592 (TAF5)
TFTC complex
135056592 (TAF5)
SAGA complex
135056592 (TAF5)
SLIK complex
135056592 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_HPS5
WD_LRWD1
LisH_PAC1
VPS8_N
CDK5RAP3
PROPPIN
Motif
Other DBs
NCBI-GeneID:
135056592
NCBI-ProteinID:
XP_063818027
LinkDB
All DBs
Position
3:683387847..683449330
Genome browser
AA seq
767 aa
AA seq
DB search
MAAVPDEASTSVKTEPELPEEVKSENAGSVKNEEPVLGNGNGVSPKPPSPQVAPAAVTSQ
ASSCSEMPDRQTLLAVLQFLRKSNLRESADILRRETGLLSAEDALSPEPSGEADGAEQQT
LLSRVSAGNSGGSAAAGGATSNSGCNAGIPVRAPLSSGPQDQPDVSAVLSAYTQQGDPTL
YQDYYSGLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFDKFHGDQEC
YYEDDLRVLASLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIV
QEHLYIDIFDGMPRSKQQIDAMVGSLSGEAKREANKVKVFFGLLKEPEIEVPLDDEDEEG
ENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRL
GSDILPSICFYTFLNAYQGLTAVDVTDDSSMIGGGFADSTVRVWSLTPKKLRSVKSTSDL
NLIDKESDDVLERIMDERTASEMKVLYGHSGPVYATSFSPDRNYLLSCSEDGTIRLWSLQ
TFTCLVAYKGHNYPVWDAQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVIST
RFHPNSNYIATASTDRTVRLWDVLNGNCVRIFTGHKGPIHSMTFTPNGKFLASGGTDGRV
LLWDIGHGLMVGELKGHTNTIYALKFSRDGEILASGSMDNTVCLWDAIKAFEDLETDDFT
SATGHINLHEHSQEMLLGTYLTKSTPVVHLHFTRRNLLLAAGAYSPQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgccagacgaggccagtacctcggtgaagacggagccggagctcccggag
gaagtgaagagcgagaacgcggggagcgtgaaaaatgaggagccggtgctcgggaacggc
aatggggtctctcccaagcccccgagtccccaggtggcccccgccgcggtcacgtcccaa
gcgtccagctgctcggagatgccggaccgccagacgctgctcgccgtgctgcagttcctg
agaaagagcaatctgcgggagtccgcggatattctgcgccgggagactggcctgctgagc
gcggaggacgccctgagccccgagccatccggggaagctgacggcgctgagcagcagacc
cttctgagccgagtgagtgccggcaactccgggggctcagcggcggcaggaggcgccaca
tccaacagcggctgcaacgcggggatcccggtgagagcaccattgagtagtggcccacag
gaccagccggatgtcagcgctgttctgtctgcttacacccagcaaggagatccaactctc
taccaggactactacagtggcctcaagcgatttatcgagtctgtgctggattgtcatcgt
gctgagctatcccaactgttctacccactgtttgtacacatgtacctggagctggtctac
aatcagcatgagaacgaagccaaatctttctttgataaatttcacggagaccaggaatgt
tattatgaagatgatctccgtgtcttagccagcctcacaaagaaagagcacatgaaagga
aatgagaccatgctggactttcggaccagcaagtttgtactgagaatatcccgtgactct
taccagctgctgaaacgccatctgcaggaaaggcagaacaatcagatctggagcatagta
caggaacacttgtatattgacatatttgatggaatgccacgcagcaagcaacagatcgat
gccatggtgggcagcctgtcaggggaagccaagcgagaagccaataaagtcaaggtgttc
tttggtcttctaaaagagccagagattgaggtacctttagatgatgaggatgaggaaggg
gaaaatgaggaaggcaagccaaagaaaaagaaaccaaaaaaggatagtattggatcgaaa
agcaagaaacaagaccccaatgcgccaccgcaaaataggattcctctcccagagctgaaa
gattctgataaacttgataaaattatgattatgaaggaagctgccaaacgggtccgcctt
ggttctgatatattgccatcaatttgtttctacacattccttaatgcttatcagggcctg
actgctgtagacgtcactgatgattccagcatgatcggaggaggctttgcggattctact
gtgcgcgtgtggagcctgacacctaaaaaactgcgcagtgttaaaagcacatctgatctc
aatttgattgacaaggaatctgatgatgtccttgaacgaatcatggatgagagaactgcc
agcgagatgaaggttttatatggacacagtggtcctgtatatgcaaccagcttcagtccg
gacaggaactacttgctgtcctgctcagaagatggcactatccgcctgtggagccttcaa
actttcacatgcttagtggcatacaaagggcacaactacccagtctgggacgcacagttc
tctccgtatggttattactttgtctctggtggacacgacagagttgctcgcttatgggct
acggaccattatcagcctttacgtatatttgctggccatctcgctgatgttataagtact
cgtttccacccaaactctaactacatagccacagcctcaacggacagaacagtcagatta
tgggatgtcctaaatggaaactgcgtgcggatcttcacgggacacaagggaccaattcac
tcaatgacatttactcccaatggaaagttccttgccagtggaggcacagatggcagagtc
ttgctttgggacattggtcatggtttgatggttggcgagttaaagggtcacacaaataca
atctatgcacttaaatttagccgtgatggagagattttagcatcaggctctatggataat
actgtttgtttatgggatgcaataaaggcttttgaagacttagaaacagatgactttaca
agtgctacagggcatataaatttacatgaacactcccaagagatgctgctaggtacttat
ttgactaaatctacccctgtagtccatcttcatttcacacgaagaaacctacttctggct
gctggcgcttatagcccccagtga
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integrated database retrieval system
