Pseudophryne corroboree (corroboree frog): 135056628
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Entry
135056628 CDS
T11513
Symbol
BTAF1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135056628 (BTAF1)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
135056628 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_MROH2B_C
TOR1L1_N
TPR_Trm732_C
HEAT_GCN1_C
HEAT_2
HEAT_GCN1
HEAT_EZ
ARM_ECM29
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
135056628
NCBI-ProteinID:
XP_063818104
LinkDB
All DBs
Position
3:697398017..697722583
Genome browser
AA seq
1847 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSPNWDARI
AAGQAVEAIVKNVPRWNPATRMKRETGSECSNDDSSLSDRLSFDRFDISRLLKHGASLLG
SAGVEFEVQDDKSVEVDPKERIARQRKLLQRKLGLDMGAAIGMNTEELFNDEDLDYMPTN
TLVNKPTLQAAEFIDSEFLPGMSNRQKNKAKRMAKLIAKQRSRDVTETNEKSSDSTDGEP
EEKRRKVTNVVISQPATESKVLIDNVPDNSSLFDETKEWPLESFCEELCNDLFNPSWEVR
HGAGTGLREILKAHGKSGGRIADSTPEEMEQQHQEWLEDLAIRLLCVFALDRFGDFVSDE
VVAPVRETCAQTLGVVLKHMNDSGVHKTVKILLRLLIQEQWEVRHGGLLGIKYTLAVRQD
LIKTLLPKALPAIIEGLQDLDDDVRAVAAASLVPVVDSLVRLQFKQVPFILGTLWDALLE
LDDLTASTNSIMTLLSSLLTYPQVQQCNIQQSLSILVPRVWPFLRHIISSVRKAALETLC
TLLFTQDQSCTGWLTPILQDMLRHIFQLCILESNQEILDLIQKVWQELIHKASVQYVVAA
ACPWMGAWLCLMMQPSHLPIDLNMLLEVKPKSKEKAGCKLRQGPCQIKEATQEYIAGSDS
VTDDSATRDYVVTRARVAAAKLLGSLCCCICDPSVNTSCQEIKPAESLAQLLLFHLNSKS
ALQRISVSLVICEWAALQKECKTVVLAVQPRLLAVLSEHLYYDEIAIPFTRMQNECKQLI
SALADAQIDIRSKVNCSVFTIDQANDLVTTIFNEATGPWVNTKLYQQLDGKRQQVQMTVM
ETNQEWQVLQLRVHTFAACAIVNIMQLPEKLNPVIKPLMEVVKKEENTVVQNYAALSIAK
LLQQCIRRTPCPNPKILKNLFSSVCVDPNITPSVSCPAPTLNNMDTLKGSNSEKDGACHT
VTKHRGIITLYRHQQAAFAITSRRGPIPKATRAQVSELPTGSGGHGPPESDEAQKQQLIQ
RRGAEFTLATIAKHFACDLAIGLPHLWEAMVGLLRSNINIDCFDGKLLLARGDESAQELV
NSLQVFEVTASSMDSKLHPLLLQHLPHLFMCLQHPYTAVRHMASRCVGVMSRIATMETIK
VFLEKVLPWLGAIDDNTKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDSVR
FMATQCFATLIRLMPLEAGIPDPPTMSEELIRLKARERSFLEQLLDGKKLENYTIPVPIK
AELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHFLRSQEYSRSKTAD
CMPHPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARLQHQVKRHNLIVASY
DVVRNDIDFFRNMKFNYCILDEGHVIKNGKTKLSKAVKQITANYRIILSGTPIQNNVLEL
WSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQVLPFLLRR
MKEDVLQDLPPKIIQDYYCSLSPLQVQLYEDFAKSRAKTDVDESVSTSALAEECDKPKLK
ATGHVFQALQYLRKLCNHPALVLSAQHPEYKKITEQLATQNSSLRDIQHAPKLSALKQLL
LDCGLGNAGTPESGTEAVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSITYVRLDGSIPA
GQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRI
GQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMGTDQLLDLFTIDKD
GKSEKMETSDASGKSSMKSILDNLGELWNQEQYDSEFSLDSFMRSLK
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccaggttagaccgcctctttattttactggacaccgggacaactccagta
acaagaaaagcagctgcacagcaacttggcgaggtggtcaaactgcaccctcatgaactt
aacaacttgttatccaaagtcttgatctacctgcgcagtccaaactgggatgcccggatt
gcagctgggcaagctgtggaagcaattgtaaaaaatgttccaagatggaacccagcgacc
cggatgaagagagagactggctcagagtgttctaatgatgactcttcactatcggaccgg
ctgagttttgacaggtttgatatatcgagactgctcaaacatggtgcctctctcctgggc
tctgctggcgtggaatttgaagtgcaagatgacaaatcggtggaagtggaccccaaggaa
aggatcgcgcgacaaaggaaactgttacagagaaaactaggccttgacatgggagctgcg
ataggcatgaacaccgaagaactatttaatgatgaggatttggactacatgccgactaac
acacttgtaaataaacctactctccaagccgcagagtttattgactcagagtttcttccg
ggcatgagtaacaggcagaaaaataaagccaagcgaatggcaaaactgattgcaaagcag
agatcccgtgatgtaactgagaccaatgaaaagagcagtgatagtacggatggggagcct
gaggaaaagaggaggaaagtgacaaatgttgtcatcagtcagccagcaacagagtccaaa
gtactgattgataatgtacctgataactcttccctttttgatgagacaaaagagtggccc
ctggagagtttttgtgaagagctttgtaatgatctgtttaacccatcttgggaggtgcgg
catggtgctggcactggtctcagggagattctcaaggcacatggtaaaagtggaggcagg
attgctgacagcacacctgaagagatggagcagcagcatcaagaatggcttgaggatttg
gctatccgcctcctgtgtgtctttgcattagaccgatttggggattttgtttcagatgaa
gtggttgccccagtgcgggagacgtgtgcacagacgttgggggtggttctcaaacacatg
aatgacagtggagttcataaaactgtgaaaatcctgctgcgcttattgatacaagagcag
tgggaagtgaggcatgggggactgctagggataaagtacacactggctgttcgtcaggat
ttaattaagacgttattaccaaaagcactaccagcaataatcgaaggtcttcaggacctt
gatgatgatgtgcgggctgtagcagcggcatctttagtgcctgttgtggacagtttggtc
aggttgcagtttaaacaggttccttttattcttggcactttatgggatgcacttctggag
ttagatgacctaacggcctctactaatagtatcatgacccttctctcttcacttttaacg
taccctcaggttcagcagtgcaatattcagcaatctctctccatattagtaccacgggta
tggcctttcctgcgtcatattatatcatccgttcgaaaggcagcgctggaaacattatgc
accttgttgttcacacaggaccagagctgtacaggctggctgacccctatcttgcaggac
atgctgcggcatatatttcagctatgtattctggagagcaaccaggaaattcttgacctt
atccaaaaggtgtggcaggaattgatacacaaggcctctgtgcagtatgtggtggctgct
gcttgcccctggatgggtgcttggctttgtttaatgatgcaaccttctcatctacctatc
gatttaaacatgctgctagaggtgaagcccaagtcaaaggaaaaagcaggttgcaagctg
cgtcaaggtccgtgccagataaaggaagccacacaggagtatatcgctggttcagacagt
gtgactgatgactccgccactagggactacgtggtgacccgagctcgtgttgctgcagca
aaattgttaggatcattatgctgctgcatctgtgaccccagtgtaaatacatcctgtcag
gagataaagcctgccgagtcactggctcagctgctactcttccacctgaactccaagtcg
gccttgcagaggatcagcgtgtctctcgttatttgtgaatgggcagcgttgcaaaaggaa
tgcaagacagtagtcctcgcagtccagccacgcctccttgcagttctctcagagcatctg
tattacgatgagattgcaatccctttcacacggatgcagaatgagtgtaaacagctcatt
tccgccctggctgatgctcaaatagatattcggagcaaagtgaactgcagcgtattcacc
atagaccaagctaatgacttggttactacaattttcaatgaagctaccggtccgtgggtt
aatactaaactctaccagcaactggatggaaagagacaacaagtgcagatgaccgtaatg
gaaaccaatcaggagtggcaggtcctgcagctcagggtgcacacgtttgctgcttgtgcc
atcgtcaacatcatgcagcttccagagaagctgaatccagtaattaaaccattaatggag
gttgtgaaaaaggaagagaatactgtggtgcagaactatgcagccctgtctattgccaaa
ctgctgcaacaatgcatcagaaggactccctgcccaaaccccaaaattcttaagaacctc
ttcagctcagtgtgtgtggatcccaatatcaccccttctgtgagctgccctgcccctacc
ctgaacaatatggacactttaaaaggatcaaattctgaaaaagatggagcatgccacacg
gtcacaaagcacagaggaataattaccctgtacagacatcaacaagccgcttttgcaatt
actagcagacggggcccaattcctaaagctacaagagctcaggtgtctgagttgccaacg
ggaagtggtggccacggtcccccagagtctgatgaggctcagaaacaacagttaattcag
agaagaggagcagagtttacacttgctactattgcaaaacactttgcctgcgatttggcc
ataggactgccacatctatgggaagcgatggttggacttctgaggagcaacattaacatt
gactgttttgatggcaagcttctcttggctagaggagatgagagtgctcaggaactagta
aacagtctccaagtgtttgaagtcaccgcctcttccatggattcaaagcttcaccctttg
ctgctacaacatcttcctcatctattcatgtgccttcaacacccgtacacagcagtgaga
cacatggcctctcgatgtgtaggagttatgagccggattgctaccatggaaactattaaa
gtctttttggagaaagttttgccgtggctcggagcgattgatgataacacaaagcaggag
ggggccattgaagcactagcctgtgtcatggagcagctggatgttggaattgtcccttac
attgtcctcctggtggtgcctgttttgggtagaatgagtgaccagacagacagtgtgcgc
ttcatggcaacgcagtgctttgcaacactcatcaggctaatgcctctagaggctgggatc
ccagatccacccactatgtcggaggagttaattagactaaaagccagggagcgcagcttc
ttggaacagctgctggacggaaagaaattggaaaattatacaattccagttccaataaaa
gctgagttgaggaaatatcaacaggatggagtgaattggttggccttcctgaataaatat
aaattacacggcattctctgtgatgacatgggactgggaaagactttgcagtctatatgt
attcttgcaggagaccatttcctcagatctcaggagtattccagaagtaagactgcggac
tgcatgcctcatccatcattggtcgtatgtcccccaaccttgactgggcactgggtggat
gaagtcgggaagttctgctctaaagaatatctgaacccattgcattacactgggccacca
acagaacgagccaggttacagcaccaggttaagagacacaacttaatcgtggcttcttat
gatgttgtgaggaatgatatagactttttcagaaatatgaaatttaattattgtattctg
gatgaaggccatgtaattaagaatggaaaaacgaaattgtcaaaagcagtaaagcagata
actgccaattatagaattatcctttctggaacaccaattcagaacaatgttttggagctg
tggtcattatttgacttcctcatgcctggctttttaggaacagaacggcagtttgctgca
agatacggaaagcctatattggcaagtagggatgctaagagctcctctcgtgaacaagaa
gccggtgtccttgcaatggaggcattgcatcggcaggttttgccattcctgcttcggaga
atgaaagaggatgtattgcaagatcttcctcctaaaattatccaagattactactgttct
ctaagtcctttgcaggtgcagttatatgaagattttgcaaaatctagagccaaaacagat
gttgatgaatccgtgtcaacgtctgcgctggcggaagagtgcgacaagccgaagttgaaa
gccacaggacatgtcttccaggccctgcagtatttgcggaagctatgcaaccaccctgct
ttggttctgtctgcacaacacccagagtacaagaagatcactgagcaactagctactcag
aactcctctctacgagatattcagcacgcccccaaactatctgcattaaaacaactactt
ttggactgtggactgggtaacgctggcaccccagagagtggcactgaagcagttgtagcc
cagcataggatattgatcttctgtcagctgaagagtatgcttgatattgtggaacatgac
cttctaaagcctcacctgccctcgattacatatgtacggctagatggaagtatacctgcc
ggccaaagacattccattgtatccaggtttaataatgatccttccatagatgttctgctg
ctgaccacccacgtgggtggcttgggtctcaacctaactggagcagacactgtagtattt
gtggaacatgactggaatccaatgagagatctccaagcaatggacagagcacatcgtatt
ggacagaaacgtgtagtcaatgtgtaccggctgataaccagagggacgctggaagagaag
ataatgggcctgcagaaattcaaaatgagtatagcaaacactgtaataagtcaagaaaat
gccagcctgcagagtatgggtactgaccagctgctggacctgttcaccattgataaggac
ggaaagagtgagaagatggagacatctgatgccagcggaaagagttcaatgaagtccatc
ctggataaccttggagaactgtggaaccaggagcagtacgactctgaatttagtctcgat
agttttatgcgttctctcaaataa
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