Pseudophryne corroboree (corroboree frog): 135056772
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Entry
135056772 CDS
T11513
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135056772 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
135056772 (EXOSC1)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135056772 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
135056772 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
GULLO2-like_3rd
Motif
Other DBs
NCBI-GeneID:
135056772
NCBI-ProteinID:
XP_063818414
LinkDB
All DBs
Position
3:complement(750081140..750098444)
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AA seq
216 aa
AA seq
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MVSATCRHSGCWQSEASSRMLAMAPGRYSVPGERLCSLEDCAPGFGTYCKHGYIFASLSG
HVIKKTDNGLMPVISVVRDTDSHLLPDVGAVVTCKVMSINSRFAKVQIMYIGSTPLKNTF
RGTIRKEDIRATEKDKVEVYKSFRPGDIVIAKVISLGDAQSNYLLSTAENELGVVVAHSE
AGVIMIPISWCEMQCPKTHIKEPRKVARVQPEFLQT
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtgctacttgcagacatagtggttgctggcagagtgaagctagctcacgcatg
ttggccatggctccgggaaggtacagtgttcctggggaaaggctgtgcagcctggaggac
tgtgcaccaggatttgggacctactgcaaacatggctacatctttgcctcgctgtccgga
cacgttataaagaagactgacaatggcctgatgccggtgatctctgtagtgagagacact
gactctcaccttctgccagatgtgggcgctgtggtcacctgtaaggtgatgagcataaac
tcgcggtttgctaaagtgcagattatgtacattggctcaaccccgctgaagaacacattt
aggggcacaatcaggaaagaagacatccgagcgacggagaaggataaggttgaagtatac
aaaagttttcgacctggagacattgttatagcaaaagttatctctttgggggacgcccaa
tccaattacctgctgagcacggcggagaacgagctgggagtggtggtggcacacagtgaa
gcaggggtgattatgatacccatcagctggtgcgagatgcaatgcccaaagactcacatc
aaggagccacggaaggtggcgcgcgtgcaacctgagtttctgcaaacttag
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