Pseudophryne corroboree (corroboree frog): 135056775
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Entry
135056775 CDS
T11513
Symbol
RRP12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pcob Pseudophryne corroboree (corroboree frog)
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcob03009
]
135056775 (RRP12)
Ribosome biogenesis [BR:
pcob03009
]
Eukaryotic type
90S particles
Other 90S particles
135056775 (RRP12)
Pre-60S particles
Other pre-60S particles
135056775 (RRP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Katanin_con80
Nop52
CDI
Motif
Other DBs
NCBI-GeneID:
135056775
NCBI-ProteinID:
XP_063818418
LinkDB
All DBs
Position
3:750275590..750485709
Genome browser
AA seq
1283 aa
AA seq
DB search
MGKTGKLRSGVSGKVKRWKKGKSSECNPEARRHREAARSRFFSRPSGKSDLTVDALKLHN
DLQSGSLSVHKKPDDNMEEEVEMATTQKSGGTFLSGLSDCTNLTFGKVQRYWESNSAAHK
EICAVLAAVTEVIRSEGGKETETEYFAALMTTLEAVESPESLAAVTYLLNLVMRRVPAPV
LIKKFSDTSKAFMDIMASQAASGSTSAVRWVISCLAVLLRKQELSAWSYPSTLQVYHGML
SFTVHSKPKIRKAAQLGVCSVLKGSDFMFSDSAPAHHPAAQSTAKFCIQEVEKSGGSKEA
TTTLHMLTLLKDLLPCFPVSVVKSCCETLLKVMTLSHVLITACAMQVFHTLFNSSPSTEA
MTAELNGQIITALYDYLPSDNDLQPLLAWLAVMEKAHINLSRLQNDLCLGHLPRLFSTSV
NCLLSPHTQVVSAAARTLKSLLTECIAPHAKDVGTVSSTPASGPGGLISKMFKCVEDGLS
YKFHASWVCVLQILQTFFEVAGKSYHPFMKKCLQTLADLRVSAHFPHPRELDITVGAAVE
SMGPEVVLKAIPLLIDGTEETCDFPRSWLIPVIRDHVKNTELGFFTRYFLPLAANVKNRA
VDLAQAGRNLEAKIYETLQWQIWTMLPGFCTKPVDVVDSFKGIARSLGMVISDRPDLRLT
VCHALRTLINKGCETEPDKAEVSRFAKNFLPILFNVYSQPPAPGEGASQKLPMLDTVRAY
LTIADQQLVSGFLEKAGVKLTEVETSEAMRLSVLDLIVAMAPYADEPSMTKIYKTIRPYL
EDKNHSLQKKAYRVLEEICGGERAPCVDFVTKNLEELQGTLVGSLKSASSPAKRPRLKCL
IHIVKQLTADHEEFITCLIPEVVICTKEASVGARKNAYTLLADIGHAFLRINPDPKDAMQ
RYLAVVYAGFTGSITMIGCSVLTLTRILFEFKDRMELEVIEELLANVCLLLSSKTREVVK
AALGFIKVIIFVMDLKVLSKHLQLMMEAIGNISQDMRRHFRMKLRNIFTKFIRKFGFDLV
KSMLPEDYHKVLVNIRKAEAKNKKQKALKQAASEGDDDREVTTLKGDSIDDILADTDEEE
EDEKQTKQQKKQAKQKNRAWLKEGEGDEPLNFLDPNAAQRVLATKPGLRNKKQSHDFKVT
ADGRLIIKDEEGDEEKSKGVDEEMADLLQEVGLRTNKAQKKRFREENDDDAAGGKTSQYK
AGGSGIHRPVSKKPEFGTNYKSKKGKGDVKQKDKHDPYAYIPLNKAKLNRRKKAKMQGQF
KGLVKAAQRGAQSGRKKRKERRV
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagacggggaagctgcgctccggtgtttccggcaaagtgaagcgatggaagaag
gggaagagtagcgagtgtaaccccgaggcccggcggcaccgggaggcagcgcgcagccgc
ttcttcagccgcccatctggtaaaagtgacttgacggtagatgcgctaaagctccacaat
gaccttcagtcggggtcgctgtccgtgcataagaagcctgatgacaacatggaagaagag
gtggaaatggccacgacacagaagtctggcggaaccttcctaagcggactgtctgactgc
actaatctcacgtttggcaaagtgcagagatactgggaatccaactccgctgcccacaag
gagatttgtgccgtgctggctgctgtgactgaagtgatccgctccgagggaggaaaggag
acagagacggagtacttcgcagccctgatgaccacactggaagccgtcgaatcccccgag
tcattggctgcggttacctacctgctaaacctggtcatgagaagggttcctgctcctgtg
ctgattaagaagttctcagatacgtcaaaagcgttcatggacatcatggcgtctcaggcc
gccagcggcagcacctcggctgtgagatgggttatatcttgtctggctgtactgctgcgc
aagcaggagctgtctgcatggagttacccatccaccctgcaggtgtaccacggcatgctg
agcttcactgtccactccaaaccaaaaatccggaaggcggcccagcttggggtttgctct
gttttaaagggcagtgacttcatgttttcagactctgcgcctgctcaccacccggctgcc
cagtccactgctaagttctgcatacaagaggttgagaagtctggaggcagcaaagaggcc
accacaacactgcacatgctgacgctgctgaaggacctgctgccctgtttccccgtcagc
gtggtgaagtcttgctgcgagacgctgctgaaagtcatgaccttaagccacgtgctgatc
acggcctgtgcaatgcaggttttccacacgctctttaacagcagccccagcacagaagca
atgacagccgagctgaatggtcagatcatcacggctctgtacgattacctgcccagtgac
aatgacctgcagcccttgctggcgtggttggctgttatggagaaagcccacattaacctg
tcaaggttgcagaatgatctctgcctgggtcatcttccacgacttttctccacgtctgtc
aattgccttctgtcccctcacacgcaggtcgtgtctgcagctgcccggacactgaagtct
ctccttacagaatgcattgctcctcatgctaaggacgttggtacagtctcatctactcca
gcatcaggacccggtgggctcatctctaaaatgttcaagtgtgtagaagacggcctctcg
tataagttccacgcttcctgggtctgtgtcctgcagatcctgcaaactttttttgaggtt
gcggggaagtcttaccacccatttatgaagaagtgtttgcagaccctggctgaccttcga
gtctctgctcatttcccgcaccccagagagctggacatcacagtgggagcggcggtggag
agcatgggaccagaggtggtactgaaggcaattcccctgctaatcgatggcacagaggaa
acctgcgacttcccacgtagctggctgatacctgttatccgggaccatgtgaagaacaca
gagctggggttcttcactagatacttcctgcctcttgctgccaacgtgaagaatcgagct
gttgatcttgcccaggccgggagaaacctggaggctaaaatctatgagactctccaatgg
cagatctggaccatgttaccgggattctgcaccaaacctgtagacgtcgtggactctttc
aaggggattgcacgatctttgggaatggttatcagtgaccggccagatctccggctcacc
gtgtgccacgcgctgcgtaccctcatcaacaagggatgtgaaaccgagcctgataaagca
gaggtgagccgctttgccaagaactttcttccaatactgttcaatgtgtacagccagcca
cctgcaccaggagagggtgcctcccaaaagcttcccatgctggacactgtgcgagcgtat
ctgaccattgcagaccagcagttggtcagtggtttcttggagaaagccggtgtgaagctg
actgaggtggagacgtctgaggccatgaggctctccgtgctggatctcattgtggcaatg
gccccctacgcagatgaaccgtcaatgaccaagatctacaagaccattcggccgtaccta
gaggacaagaaccacagtctgcagaagaaggcgtacagggtgctggaggagatctgcggc
ggggagagggctccctgtgtagactttgtgaccaaaaacttggaggagctgcagggaact
cttgtgggttctttgaaaagtgcttcatccccagctaaacggcctcgtttgaaatgcctg
atccatatcgtcaaacagctcacagccgatcatgaagaattcataacctgtcttattcca
gaggtggtgatttgcactaaagaagcttcagttggggcgaggaagaatgcatatacgttg
ctggcagatataggacacgccttcctgcgtatcaacccagatccgaaagatgccatgcag
cgttatctcgcggttgtctatgccggcttcaccgggtccatcacgatgatcggctgttca
gttctcaccctgaccaggatcctgtttgaattcaaagatcgcatggagctggaggtgatt
gaggaattactggcgaacgtgtgcctcctgttgagttccaagacgcgggaggttgtgaag
gctgctctgggcttcattaaggtcatcatctttgtaatggacttgaaagtcctctccaag
caccttcagttgatgatggaagccattggaaatataagccaggacatgaggcgccacttc
cgcatgaaactgagaaacatctttaccaagttcattcgcaaattcgggtttgatctggtg
aagagcatgctgccagaggactaccacaaggtcctggtcaacatccggaaggcagaagct
aaaaacaaaaaacagaaagctctgaaacaggctgcatcggagggagatgacgatcgggag
gttacgacgctcaagggagacagcatagacgatatcttggcggatacagacgaggaagag
gaggatgagaaacagacaaagcagcagaagaaacaggccaagcagaagaacagagcctgg
ctcaaagaaggggaaggagacgaacccctaaacttcctggacccaaatgccgctcagcgt
gtcctcgccacaaaaccaggtctgaggaacaaaaagcagagccacgacttcaaggtcact
gcagatgggcggctcattattaaggatgaggaaggtgatgaggagaagtcgaaaggtgtg
gatgaagagatggcggacctcttgcaagaagtcggccttcgaaccaacaaagctcagaag
aagcgtttccgagaagagaatgacgacgatgcggctggagggaagacatcgcaatataaa
gctgggggctctggaatacacagacctgtttccaagaagccggagtttgggacgaattac
aaatcaaagaaaggaaaaggtgacgtgaaacagaaagacaagcatgacccctatgcctac
atacccttaaacaaagccaagctcaaccgcaggaaaaaggcgaagatgcagggccagttc
aaaggcctggtgaaagccgcgcagagaggggcacagagcggaaggaaaaagaggaaagaa
aggagagtgtga
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