Pseudophryne corroboree (corroboree frog): 135057642
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Entry
135057642 CDS
T11513
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03022
Basal transcription factors
pcob03420
Nucleotide excision repair
pcob04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135057642 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
135057642 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135057642 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcob01001
]
135057642 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcob03021
]
135057642 (CDK7)
03019 Messenger RNA biogenesis [BR:
pcob03019
]
135057642 (CDK7)
03400 DNA repair and recombination proteins [BR:
pcob03400
]
135057642 (CDK7)
Enzymes [BR:
pcob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
135057642 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
135057642 (CDK7)
Protein kinases [BR:
pcob01001
]
Serine/threonine kinases: CMGC group
CDK family
135057642 (CDK7)
Transcription machinery [BR:
pcob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
135057642 (CDK7)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
135057642 (CDK7)
DNA repair and recombination proteins [BR:
pcob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
135057642 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
Haspin_kinase
FTA2
APH
Motif
Other DBs
NCBI-GeneID:
135057642
NCBI-ProteinID:
XP_063819532
LinkDB
All DBs
Position
1:147048551..147206554
Genome browser
AA seq
356 aa
AA seq
DB search
MMEAAGVGGGVGIEVRSRSKQYEKLEFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAE
AKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEAIIRDTSLVLT
PAHIKSYMLMTLQGLEYLHHLWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYT
HQVVTRWYRSPELLFGSRMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG
TPKEEQWPGMSSLPDYVTFKSFPGTPLHIIFSAAGDDLLELLQGLFTFNPCVRYTTSQAL
KKKYFSNRPAPTPGHLLPRPNCSVEALKEQQNLTLGIKRKRVDGPEQKDIVKKLNF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggcggcaggtgtcggaggaggagtcggtatagaagtgcggtctcggtctaag
cagtacgagaagctggagttcttaggagagggtcagtttgctacagtctacaaagcaagg
gataagaacactgatagaattgtggcaattaaaaagattaaattgggtcaccgagcagaa
gccaaggatggtattaacagaacagcattaagagaaatcaagcttctacaagagttaagt
catccaaatatcataggtcttctggatgcatttggccacaaatcaaacataagtcttgta
ttcgatttcatggaaacggatttagaggctataataagagacaccagcttagtcttaacg
ccagcgcacataaagtcttacatgctgatgaccctgcagggcttggaatatttgcatcat
ctctggatcctgcatagggatttgaagccaaacaatttgctgctagatgagaatggggtc
cttaaactggctgattttggtctggctaaatcatttgggagtccaaacagagtttatact
caccaagtggtaacaaggtggtatcgatccccagagttactgtttggttcaaggatgtac
ggtgtcggtgtggacatgtgggcagttgggtgtattctggccgaactcctactaagagtc
ccttttctgcctggggattctgatctggatcagctaacaagaatatttgagacactgggt
actccaaaagaagagcagtggcctggcatgtccagtttaccagattacgtcaccttcaag
agctttccaggcaccccactccatattatattcagtgctgcaggagatgacctccttgaa
ctgctacaagggctattcaccttcaacccatgtgtacgatacacaacctcccaggcacta
aagaaaaagtatttcagtaataggccagcaccaacgcctgggcatttattgccaagaccc
aattgttctgtagaagcgttaaaagagcagcaaaatcttactctgggcatcaaaaggaag
cgggtggatggtccagaacaaaaagacattgtgaaaaagctgaatttctga
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