Pseudophryne corroboree (corroboree frog): 135059037
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Entry
135059037 CDS
T11513
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
pcob Pseudophryne corroboree (corroboree frog)
Pathway
pcob03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135059037 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcob03019
]
135059037 (TNPO1)
03009 Ribosome biogenesis [BR:
pcob03009
]
135059037 (TNPO1)
Messenger RNA biogenesis [BR:
pcob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135059037 (TNPO1)
Ribosome biogenesis [BR:
pcob03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
135059037 (TNPO1)
Pre-60S particles
135059037 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
IBN_N
Arm
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
Cnd1
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
MMS19_C
HEAT_GCN1_C
CEP104-like_TOG
Ltn1_1st
Dopey_N
UNC45-central
INTS7_N
TPR_TTI1_C
RTP1_C1
VPS15-like_hel
DUF3689
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
135059037
NCBI-ProteinID:
XP_063819948
LinkDB
All DBs
Position
1:complement(168194591..168474626)
Genome browser
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTSTQRTVQQKLEQLNQFPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCGLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLERPLNVMIPKFL
QFFKHSSPKIRSHAVACVNQFIIGRTQALMLHIDSFIENLFALATDEESEVRKNVCRALV
MLLEVRMDRLLPHMHNIVEYMLLRTQDQDENVALEACEFWLTLAEQPICKEVLCRHLAKL
IPVLVNGMKYSEIDIILLKGDVEEDEAVPDSEQDIRPRFHRSRTVAQPHEEDGIEEDDDD
DDDLDDDETISDWNIRKCSAAALDVLANVFRDDLLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDMYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLGYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNVLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLQQAMMHNAQPDQYESPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKACIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICAMISVNPAGVVQDFIFFCDAVA
SWINPKEDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagccggacgagcagggcctccagcaaatcctgcagctgctcaaa
gagtcccagtctccggacacctccacgcagaggaccgtgcaacagaaattggagcaactg
aaccagtttccagatttcaacaattacctaatttttgttctgacaaagctaaaatctgaa
gatgaacctacgcgttctttgagtgggctgatcctgaaaaataatgtaaaagctcatttt
cacaatttccccaatggggtgactgactttataaagagtgaatgtttgaataacatcggt
gactcatctccactaattcgcgcaacagtgggtatcctgatcacaacaattgcttcgaaa
ggagagttacagaattggcctgagctcctgccaaaattgtgtggtctattggattctgag
gattacaacacatgtgaaggagcatttggagcccttcagaaaatctgtgaagactctgcg
gaaatcttagacagtgatgttttggaaaggcctctcaatgttatgattccaaagtttctg
cagttcttcaaacatagtagtccaaaaataaggtcacatgctgtagcctgtgtaaatcag
ttcatcattgggagaacgcaagctcttatgctgcacattgattcctttattgagaatctg
tttgctttggccactgatgaagaatcagaggttcgtaaaaatgtctgcagggcgcttgtc
atgctgctggaagtgcgaatggaccgcctgctccctcacatgcacaacattgtggagtac
atgctgctgagaacgcaggaccaagacgaaaatgtggctttagaggcttgtgagttttgg
cttactcttgctgagcaaccaatctgcaaagaagttctatgtagacatcttgcaaagttg
ataccagtcttggtaaatgggatgaaatattcagaaatagatattatcttgcttaagggt
gatgtagaagaggatgaagctgttcctgacagtgagcaggacatacggccccgattccac
agatcacgaacagtggctcagccacatgaggaggatggaattgaggaggatgatgatgat
gacgacgaccttgatgatgatgagacaatctcagactggaatataaggaaatgttcagct
gcagctcttgatgtacttgccaatgtgtttcgggatgatcttttaccacacattttgcct
ctattaaaagaacttcttttccatccggaatgggtagtcaaggagtctggaatcttggtt
cttggcgcaattgcagaaggttgcatgcagggtatgattccatacctccctgagcttatc
cctcaccttattcagtgcctttctgataagaaggctcttgtacgctccattacttgctgg
acccttagccgctatgcacactgggtagttagccagcccccggacatgtatttaaagcca
ttaatgacagagctgctaaaacgtatccttgacagcaacaagagagtacaagaagctgct
tgcagtgcctttgctaccttagaagaggaggcgtgtactgaactcgtcccttacttgggt
tacatcctggacaccttggtctttgcattcagtaaataccagcataaaaacctgctcatc
ctttatgatgctatagggacgctagcagattctgtggggcatcatttaaataagccagaa
tatattcagatgctgatgcctccgcttattcagaaatggaatgttctaaaggatgaggac
aaggatctcttccctttacttgagtgcctatcttctgtcgctactgcacttcaatctggt
ttcttaccatactgtgaacctgtgtaccagcgttgtgtgaatttggtacaaaagactctt
caacaagcaatgatgcacaatgctcagcctgaccagtatgagtctccagataaagatttc
atgattgtggcgctagatttactgagtggactagctgaaggccttggtggtaacattgaa
caacttgtggctcggagcaacatactcacgttgatgtaccagtgtatgcaggataaaatg
ccagaggtccgtcaaagctcttttgctttgttgggagatctgacaaaggcctgttttcaa
catgtcaaagcttgtattgctgattttatgcccattttaggaacaaatttaaacccggag
ttaatttctgtgtgcaacaatgctacatgggcaatcggtgaaatctctatacaaatggga
attgaaatgcagccttatattccaatggtgttacaccaactagtagaaatcattaacaga
cccaacacaccaaagacactcttagagaatacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgtacttct
ttacggaacatccgagacaatgaagagaaggactctgcttttcgtggaatttgtgctatg
atcagtgttaatcctgcaggtgtagttcaggattttatatttttctgtgatgctgttgcg
tcgtggattaatccaaaggaagaccttcgagacatgttctgtaagattcttcatggattt
aaaaaccaagtaggggatgaaaattggagacgtttctcagatcagtttccactacccctc
aaagaacgccttgcagcttactacggagtttaa
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