KEGG   Pseudophryne corroboree (corroboree frog): 135070507
Entry
135070507         CDS       T11513                                 
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
pcob  Pseudophryne corroboree (corroboree frog)
Pathway
pcob04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pcob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    135070507 (UFD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcob03009]
    135070507 (UFD1)
Ribosome biogenesis [BR:pcob03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    135070507 (UFD1)
SSDB
Motif
Pfam: UFD1_N1 UFD1_N2 CDC48_2
Other DBs
NCBI-GeneID: 135070507
NCBI-ProteinID: XP_063820839
LinkDB
Position
1:355855030..355947411
AA seq 307 aa
MFSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERHTQQEEPSDIEPDQSEYAADLGFRAFTGSGNRLDGKKK
GIDPSPSPLKPGDIRRGIPNYEFKIGTITFIRNARPQAKRVEEDDALSRFIAFSGEGQSL
RNKGRKP
NT seq 924 nt   +upstreamnt  +downstreamnt
atgttttcttttaatatgtttgaccacccgataccacgggttttccagaaccgcttttcc
acacagtatcgctgctactctgtgtctatgttagctgggcccaatgaccgctctgatgtg
gagaaaggaggaaaaattatcatgcctccgtctgcactggatcaactgagcagattgaac
atcacatatcccatgctcttcaaattaaccaataagaactccgatagaatgacacattgt
ggtgttcttgagtttgttgcagatgaaggtatttgctacctccctcattggatgatgcag
aatttgctgttagaagagggaggtctggtgcaagtggaaagcgtcaatctccaggtggcc
acatactccaaattccaaccacagagccccgatttcctggacatcacaaacccaaaagca
gtattggagaatgcactgaggaactttgcttgtctgacaactggagatgtaattgccatt
aattacaatgagaagatttatgagcttcgggtgatggaaacaaaaccagacaaagctgta
tccattatagagtgcgacatgaatgtggattttgatgccccactaggttacaaagagcct
gaacgacacacacagcaggaagagccgtctgacattgaaccagatcagagcgagtatgct
gcagatttaggattcagggccttcaccgggtctgggaatagattggatggaaagaaaaaa
gggattgatcctagtccttctccattaaaaccaggagacatacgaagaggaatccccaac
tatgaattcaagatcggcaccatcactttcatcaggaacgcccggccgcaagctaagagg
gtagaagaagatgatgcgctcagtcgtttcattgcattttctggagaaggacagtccctt
cggaacaaaggcaggaaaccctaa

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