Phasianus colchicus (Ring-necked pheasant): 116225499
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Entry
116225499 CDS
T07365
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116225499 (SPG11)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116225499 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Kbp-5
Motif
Other DBs
NCBI-GeneID:
116225499
NCBI-ProteinID:
XP_031443779
Ensembl:
ENSPCLG00000005502
LinkDB
All DBs
Position
Unknown
AA seq
2437 aa
AA seq
DB search
MAAGGRGSPPLRGMAGARRELRVLLAARPDEERDSVRGAARARLSAGQDALGSLLLRDGI
YLQTLGPGGGGRARSSALPGAWADFAWEGAAEHDPQANQTKILAVSESHDLFVYEFTKDG
RCSPDPLHSCEEGALKKLLEADSISLSSILSLRILSFKDNRCILLLNSFIVMHLTFPGES
TSLETCDCFTLDLSPPVLERITDINFCRGILFFLDSSGWIYVFDSFDGANLAHIDVSLCQ
GGVQDGHRSSTITSPLTAVKVSYDLSVAVIISSSNNACSVDLNMYFRQFPGHLICKRDPE
SLPLKPPEGVDEDDLASSDYSMELLSSPFRTDRSWKAHLSSLRSTIRKRRSHSPHLLCDV
NLPWYQYFTHLEDHDPLIYETSEKALAIAPKTFPCVLSNPLQSAGTKLSDTGQQWKQILP
VQLSQEVVKLECKSVTGAKALFVILTDDKALTLALWDFESQDVTHYQFSKNSVYVDCNED
VPLCLLLTEHGLSLILFGLTQEEFLNRLMIYGSAGVVDSVCHLNGWGRCSIPVHALEAGL
ENRQLDTVDLFLKSKESLFNLSALCSEPQQSADGASCSFLKNLQELRPALNLLCSAIREN
DMEPQSKHFSEQLLNLTLTFLSKQLEEIFVHTEEPDRYLQKAAEILADYIIELRTFMKNY
PRSQVNITNIESDSDEDLPAIEESQTWEKLTPEEVIAEAILSNKMPEAQTFFRMHQHPAQ
SLQEFIRMGLDLVYGRLLKGNTREASALLKNMGFDVKQQLHKICFYTVDKHVRDLLVKVL
QEENYFSEKEKKMIDFVHQVESLYSESFQENKEMQSLSSIKNWRQEQDSSKHLATLESLL
DHDGRWVPSREVRVMLNWAQWWDELLQDLILLPRKQGQELATCNPEALWMHLTAQHNWLS
ITSWIEEFEPNHSSCGQSKWPPLTASIVDQNTLCSGYMRNDILNKLARNGIFVLSELEDF
ELLLQRLVSLGGVLQSPHPVPKYSAASGLDFHARFVLHCLEHNLQYMLYTYLDYYSLTSS
NCPILDDKELHEAHPWFEFLVQCRGVASNPRDPKMIFQASLANAQILIPSNQASVSSMLL
EGRTLLALATTMYAPGGIDQVLQNEDTEKPLKKVDPQLLKMALSPYPKLRAALFPPCTSH
GILPPDISLYHLVQSLVPFDPSKLFGWQSTNTLAVSDASSDLPHFSSPELVNKYAIMERL
DFLYYLRHGRPSFAFGTFLVQQLVKSKSPKQLIQQAGNEAYLLGLSFFSTASVAAACVCF
LELLGLSSLKLRVDVKVANMIFGYRTRNEESQHNQIRESLVEQLMRLADGEKATTEEVLK
SLEAAFWDSIEHQGIKRTSSDSRQQWSLVMQFCKLHTTKLSTSYLKECAESNDWLQFIIQ
AQLYSYKPDEVTSVLEGFAPVIQHHLMLALEKSPFLHGAAGDPEGSTGSRHAGGLFQILF
RCQKSPSAVCHLLAEGLREHAPILSVLAACFPEADIIHCLCVWIITSVDNVTRSEATKHI
QSSIENHKWDLRDLSLIWKVFLRKQKCQTLIRGFQLFLKDSPLLHILEMYDLCMNCKKYN
EAKTKLDEFQKLLTNLKAADGPAASQISVQWLESQALFLLELMMQQCRTEYELGKLLQLL
AATDNLLLDGPYVKKLCALSEILKGSSVSINPSMLTRFSPETFQNECRSILEELQEKGMF
SLARKVAELAELPADSVVTREILRDLHLLRDVGEWDQDQIRIKFWKKCNDTFMKNSISSK
AASDFFLNQANMVFESSVHEKINNITERHLLLTLAGHWLAKDVSMALDKLEEIEKQIWVC
RITQQTLSPDEGSGRSRRSSCAAVNGDLTFDNLAKEFSFSKLPALNTPTYLNVEGLEFRE
GQQTLAGDEEESLRFLLGCLLDEGSVHEASRVCRYFHFYSRDVSLVLHCRALASGQADLD
KLHTDIQALVAAEKTQESSASQQSRVPSTSSLEDWTHIADPSLDDQIVLSLKALTDECVH
GRNYCRQVLCLYELSKELNCSYSEMSALDPEKVLRAILSSQQAERCRRAQAFITTQGLQP
ETVAELVAKEVVQELLASSEGKGQKQVSNPADESQAFLQLAKLCQDHTLVGMKLLEKISS
VPRGELSCITELLILAHNCFSLTCHMEGITRVLQAARLLTDEHLAPNDEYGLMVRLLTGI
GRYNEMTYIFELLHEKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALCFS
MCREIGENHEAAARIQLKLIESQPWEESLQDVANLKKLLMKALTLFIDAAESYSKDSCVR
QALRCRCLTKLITLQLHFLNTGQSTMLINRNRQNLVECIVSLPRFYQAAVVAEAYEFVPD
WAEVLYQQVIAKGDFSYLEEFKQQRLLKPALFEEIAKKCKQHPPTDNALRNLKKLLAYCE
DIATYYRLAYDNKFYDVVNVLLKDAQTGCCLNDMLSN
NT seq
7314 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggggggcgcgggtcgccgccgctgagggggatggcgggagcgaggcgggag
ctgcgcgtactgctggcggcccgcccggatgaggagcgggactccgtgcggggcgctgcg
cgggcccggctgagcgcggggcaggacgcgctgggcagcctgctgctccgtgacgggatc
tacctgcagaccctggggccgggcggaggcggccgggcgcggagcagcgcgctgccggga
gcgtgggctgacttcgcgtgggagggtgcggcggagcacgatccgcaagcaaaccagacg
aaaatactggctgtgagtgaaagtcacgacctgtttgtctacgaattcaccaaagatggg
agatgcagcccggatcccctgcacagctgtgaggaaggcgctctgaagaagctcctcgag
gctgacagcatcagtctttcttcaattttgtctttgaggatactgtcttttaaagacaac
agatgcatacttctgctcaacagctttattgttatgcatcttacctttcctggagagagt
acatcgttggagacgtgtgactgctttacccttgatttgtctccaccagttttggaaaga
ataacagatataaacttctgcagggggattctgtttttcttggatagttctggctggatc
tatgtatttgattcttttgatggtgcaaatctagcacatattgacgtgtcactgtgccag
ggaggcgtgcaggatgggcacaggagttccaccatcacatcaccgctcactgcagtcaaa
gtgtcatatgatctcagtgttgctgtgatcatcagttcttccaacaatgcctgttctgtg
gatctaaacatgtacttcagacagttccctgggcatttgatttgtaaaagagatcctgaa
agccttccactgaagccacctgagggagttgatgaggatgaccttgccagttctgactac
agtatggagctgctgtcctcacctttccgcacagacaggtcgtggaaggcacacttatcc
tccctgcgcagcacaatcaggaaaagaagatcacattccccacatttgctgtgtgatgtg
aacttaccttggtatcagtattttacccatcttgaagatcacgatcccttaatctatgaa
acctctgagaaggcactggccattgctccaaagacttttccgtgcgtcctttccaaccca
ttgcagagtgctggcacaaagctcagtgatacggggcagcagtggaagcaaatcctccct
gtacagttatcacaagaagtggtgaaactggagtgtaaatctgtgactggagctaaagca
ctgtttgtgatcctgactgatgacaaagcactgacacttgctctctgggattttgagtcc
caagatgtaacacattaccagttcagcaaaaatagtgtttatgtggattgtaatgaggat
gtgccgttgtgtctgctgctgacagagcatggcctctccttaattctgtttggtttaact
caagaggaatttttgaacagactgatgatctatggcagtgctggagtcgtggattctgta
tgtcacctcaacggatgggggcggtgttctattccagtacatgcactagaggctggcttg
gaaaatcgtcagctggacacagtagatttatttttaaaaagcaaagaaagtcttttcaat
ctttctgcactctgctccgaaccccagcagtctgctgatggtgcatcctgctcttttctg
aaaaatttgcaagagctgagaccagccttaaacttgctttgctcagcaatcagagagaat
gacatggagccacagagcaaacacttttcagagcagctgctgaacctcacgttgactttc
cttagcaagcagcttgaagaaatttttgtccacacagaggaacctgatagatacctgcag
aaggctgcagagattttagctgattacatcattgaactgaggacgtttatgaaaaactat
cctcgatcacaagtgaatatcacaaatatagagagtgattctgatgaagacctacctgca
atagaggaaagccagacatgggaaaaactgacacctgaggaagtcattgctgaggccatc
ttaagtaacaaaatgccagaggcccagaccttcttccgaatgcaccagcatcctgctcag
agccttcaggagttcattcggatgggtttggatctggtttatggccgccttctgaagggc
aataccagagaggcctcagctctcctgaagaacatgggttttgatgtgaagcagcagttg
cataagatatgtttctacacggttgataaacacgtacgagatttgctggtcaaagtttta
caagaagaaaattatttttctgaaaaagagaagaaaatgatagactttgtgcatcaggtt
gaaagcttgtactcggagtccttccaagaaaataaagagatgcaatctctttccagcata
aagaactggagacaggaacaagactcttccaaacatttggccactctggagtctttgttg
gatcacgatggacgctgggttcccagcagggaggtcagggtgatgctgaactgggctcag
tggtgggatgagctccttcaggacctgattcttctccccagaaaacaaggccaagaactt
gccacatgtaaccctgaggctctttggatgcacctgacagcccagcacaactggcttagt
atcacttcatggattgaagaatttgagcccaaccacagttcatgtggacaaagtaaatgg
ccacccctgactgcaagcattgttgaccaaaacacattgtgtagtggctacatgagaaat
gatatattgaacaagctggccagaaatgggatttttgtcctttctgaattggaagatttt
gaacttctgctccaaagattggtttccctcggaggagttctgcaaagtcctcaccctgtc
ccaaagtacagtgctgcgagtggtttggacttccatgctcgttttgtccttcactgccta
gaacacaatttgcaatatatgttatacacatacctagattactacagcttaacttcttcc
aactgccctattttggatgacaaggaactgcatgaagcacatccctggtttgaattcctc
gtgcagtgccggggggttgccagtaacccacgagatccaaagatgatttttcaggcgagt
ctagcaaatgctcagatcttgattcctagtaatcaagccagtgtgagcagcatgctgctg
gagggacgtacgctgttagctcttgctacaaccatgtatgcacctggaggcattgatcag
gttcttcagaatgaagatacggagaaaccactaaagaaagttgaccctcagctcttaaaa
atggcattgagtccttaccccaaactcagagctgctctttttcccccttgcacctctcat
ggaattttgccacctgacatctccctttatcaccttgttcagtcattagtgccctttgat
cccagtaagttatttggctggcagtcgacaaatacccttgctgtatcggatgcatcaagt
gaccttcctcatttttcatcccctgaactggtgaacaaatacgctataatggaacgactg
gacttcttgtactacctgcgccatgggcgtccatcgtttgccttcggtacatttttggtc
cagcagttggtcaagagcaaaagccccaaacagttgattcagcaagcaggaaatgaagcc
tatcttctaggcctttctttcttcagtacagcttcagtagcagctgcctgcgtgtgcttt
ctggaactgcttgggctcagcagcctcaaactgagagttgatgttaaggttgcaaacatg
atattcggttacagaaccagaaatgaggaatctcagcacaatcaaataagggaatcttta
gttgaacagttaatgaggttggctgatggtgaaaaagcaacaacagaagaagttcttaaa
tccttagaagcagccttttgggattcaattgagcatcaaggaataaagaggacatccagt
gactccagacagcagtggtccttggtgatgcagttctgcaaactccataccacgaaactg
agcacctcatacctaaaggagtgtgctgaatccaacgactggctgcagttcatcatccaa
gcccagctgtacagctataagccagatgaggtcacgtctgtccttgaaggcttcgctccc
gttatacagcatcacctgatgttggctctggagaagtccccatttctgcacggcgctgca
ggggatcctgagggcagcactgggagcagacatgcaggtggtctcttccaaatccttttc
cggtgtcagaagagccccagtgctgtgtgtcacctcttggctgaaggactgagagaacac
gctcccattctgagtgttttagcagcatgtttccctgaggctgacattattcattgtctc
tgtgtctggataattaccagtgtggataatgttaccagatctgaagcaacaaaacatatt
cagagctcaatagaaaatcacaagtgggatcttcgtgacctgtcactgatctggaaagtg
tttttaagaaagcaaaaatgtcaaacacttataaggggattccagctctttttaaaggat
tcccctttactgcatattctggagatgtatgatctgtgcatgaactgtaaaaaatacaac
gaagctaaaaccaaactggacgagtttcagaaactcctcacaaatcttaaggctgccgat
ggaccagcagcttcacaaatctctgtgcagtggttggaatcacaggccttgtttcttctg
gaattgatgatgcagcagtgtaggacagaatacgaattgggaaagctcttacagctgctt
gctgcaacagataatcttctgcttgatggcccttatgtgaagaaactctgtgctctcagt
gagatcctgaagggctcctccgtgtccattaatccctccatgctgaccagattcagccca
gaaacgtttcagaatgagtgcagatcgattctggaggagctccaagagaaaggaatgttc
tctctggctcggaaggtggcagagctggctgaactgcctgcagacagcgtggttacccga
gagattctaagagatctacatcttttaagagacgtgggagagtgggatcaagatcagata
agaattaaattctggaaaaaatgtaacgacaccttcatgaaaaattccatctccagcaaa
gctgcatcagatttctttttgaatcaggccaatatggtgtttgaatcttcagttcatgag
aagataaacaacattacagagagacatttgctgcttaccctggctggccattggctagcc
aaggatgtctcgatggcactggacaaattagaagaaatagagaagcagatctgggtttgt
cgtatcacacaacaaacattgtccccagatgaggggtcaggcaggtcgaggcgctcctcc
tgtgctgcagtgaatggggatttaacttttgataacttggccaaggagttttctttttca
aagctacctgctctgaacacaccaacctacttgaacgtggagggtctggaattcagggag
ggccagcagaccttggctggtgatgaggaggagtcgctcaggtttctgctcggatgcctt
ctcgacgaaggaagcgtgcacgaggccagccgtgtgtgtcgctatttccacttctacagc
agagatgtttctctggtactgcactgcagagccctggcctcaggacaggctgacctggac
aaactgcacacagatattcaggctcttgtagcagcagagaagacacaggaaagcagtgca
tcgcagcagagcagagtcccgagcacatcaagcttagaggactggacgcacattgcagat
ccgtctctggatgatcagattgtcctcagtctgaaggctctcacagatgaatgtgtccat
gggaggaactactgcagacaggttctctgtctgtatgaactttctaaggaactgaactgc
tcctacagtgagatgtcagcccttgaccctgaaaaagtgcttcgggcaattctgtcatcc
cagcaggcagagcgatgcaggagggctcaggcattcatcaccacgcagggcctgcagccc
gaaactgtggcagagctggtggccaaagaagtcgtgcaggagctgctggcctcttcagaa
ggaaaaggacagaagcaggtttccaaccctgcagatgagagccaggcgttcctgcagctc
gccaagctgtgccaggaccacacgctggtgggcatgaagctgctggagaaaatttcctct
gtgccacgtggggaactgtcatgcattacagaactgctgattttggcccataattgcttt
agtctgacttgccacatggaaggaatcaccagggtcctgcaggcagcacgacttctcaca
gatgagcatttggcacctaatgatgagtatggacttatggttcgtcttctcactgggatt
ggcagatacaatgagatgacctacatatttgagctgctgcacgagaagcattactttgag
gtgctcatgagaaagaagttagacccgagtgggacactgaagactgctctgctggattac
atcaagcgctgccgcccaggggacagtgagaagcacaacatgattgccctttgcttcagc
atgtgccgggaaattggagagaatcacgaggctgctgctcgcatacagctgaaactcatt
gagtctcagccatgggaggagtctcttcaggatgttgcaaacttaaagaaactgctgatg
aaagctctgaccctcttcattgatgcagcagaaagttactctaaggactcctgtgtccgc
caggccctgcgctgccgctgcctcacgaagctcatcactctgcagctgcattttctgaac
actggtcagagcaccatgctgattaacaggaacaggcagaacctggtggaatgcattgtg
tccttgcctcgattctatcaagcggctgttgtggccgaggcgtatgagtttgttccagat
tgggctgaagttctgtaccaacaagtgattgctaagggagacttcagttacttagaagaa
tttaaacaacagagactgctgaagcctgccctgtttgaggagattgctaagaagtgtaag
cagcacccacccactgacaatgctctgagaaatctgaagaagctgctggcttactgcgag
gacatcgccacgtactacagactggcctatgataacaagttctatgatgtggtcaacgtg
ctcctgaaggacgcacagactggatgctgccttaatgatatgttatccaactag
DBGET
integrated database retrieval system
