Phasianus colchicus (Ring-necked pheasant): 116225626
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Entry
116225626 CDS
T07365
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04140
Autophagy - animal
pcoc04148
Efferocytosis
pcoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116225626 (VPS16)
04148 Efferocytosis
116225626 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116225626 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116225626 (VPS16)
Membrane trafficking [BR:
pcoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116225626 (VPS16)
Hops complex
116225626 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF3939
Motif
Other DBs
NCBI-GeneID:
116225626
NCBI-ProteinID:
XP_031443935
Ensembl:
ENSPCLG00000005964
UniProt:
A0A669PDP9
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MDCYTANWNPLGEEAFYRKFELYTMEWGLREDLRDCLVAAAPYGGPIALLKNNARKEKSP
SARPLLEIYSASGLLLASIPWKSGQLVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKPPSCW
AVLTQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPSAGAYLQMAVSFNYRCLALFTDT
GYIWMGLATLKDKLCEFNSTIRSAPKQMVWCTRPRSRQRAVVLAWDRQLMVAGNSTECIR
FVLDEDSYLVPEPDGVRILSRTSHEFLHEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPETQKSLLRAASFGKCFIDKFPPESFVR
MCQDLRVLNSIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLPEIQG
VSRILAHWACYKVQQKDKSDEEVAYAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYSEKRIEGRVGALQNAVDEYYKA
KNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHNTVSTLIQDGHHKKAEQLYREFKI
PDKRYWWLKISALATRGDWEEMEKFSKSKKSPIGYLPFVEIAVKHHNRYEAKKYAPRVTP
EQRVKAFILVGDLEQAADAAIEHKNEAEMNLVLSKCSASTDSAVMEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggccaactggaacccgctgggcgaagaggccttctaccgcaagttc
gagctgtacaccatggagtggggcctgagggaggacctgcgggactgcctggtggcagct
gcgccgtacggcgggcccatagctctgctgaagaacaacgccaggaaggagaaatccccc
agcgcccgcccgctgctggagatctactcggcctcggggctgctcctggccagcatcccg
tggaagagtggccagctggtgcagctgggctggacagccagcgaggacctgctgtgcatt
caggaggatggcactgttctcatctacaacctcttctgcgagttcaagcgtcacttcagc
atgggcaacgaggtgctgcagaaccacgtgctggaggcgaaggtcttccacacagagtac
ggcactggtgtggccatcctcactggagcgcaccgcttctccttgaccaccaacatcgat
gacctgaagctgcgcaggatgcccgaggtgccaggtctgcagaagccgccctcttgctgg
gctgtgctgacccaagatagagtgaccatcgtcctgctggcggtcggccaggacctgtac
ctgctggacaacacctcctgctctgtggtgacaccccctggcatgagcccctccgctggt
gcctacctgcagatggccgtgtccttcaactaccgctgcctggcactcttcactgacact
ggctacatctggatggggttggccacgctgaaggacaagctctgcgagttcaacagcacc
atccgatctgcacccaaacagatggtttggtgcacacgtccccgcagccggcagcgtgcc
gtggtgctggcctgggaccggcagctcatggtggctgggaattccacggagtgcatccga
tttgtcctggatgaggactcctacctggtgccagagccagatggggtccggatcttgtcc
cgcacctcccatgagttcctgcacgagatcccagaagcgagccaggaaatcttcaaaatc
gcttccatggcaccaggggcactcctgctagaggcacagaaggagtatgagaaggagagc
caaaaggcagatgagtacctgagggagataaaggaccagaagctgctcccagaagcagtg
agccagtgcatcgaggcagccggctatgagcatgagccagagactcagaagtccctgctg
cgagcagcctcttttgggaagtgcttcatcgacaagttccccccggagagctttgtgcgc
atgtgccaggacctgcgggttctcaactccatccgggactaccagatcggcatccccctc
accttcacccaatacaaacgactcaccattgaggtcttgctggacaggctggtcctgcgg
cggctctaccccctggccatcaggatctgtgagtacctgcgcctcccggagatccagggc
gtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaaatctgat
gaggaggtggcttatgccattaaccagaagctgggtgacacgccaggcatctcctactct
gagatcgctgcccgagcgtacgactgcggcaggacagagctggccatcaagctgctggag
tacgagccacgctctggggagcaggtcccactgctgctgaagatgaagcggagcaagctg
gccctgagcaaagccatcgagagtggggacacagacctggtctacactgtcgtgctgcac
ctgaagaacgagctgaatcgtggcaccttcttcatgacactgcagaaccagccagtggct
ctgagcctctaccgccagttttgcaagcaccaggagcgagagacgctgaaggacttgtac
aaccaggatgacaaccaccaggagctcggcaacttccacgtccactccagctactcagag
aagcgcatcgaagggcgggtaggagccctgcagaatgctgtggatgagtactacaaggcc
aagaatgagtttgctgccaaggccacagaggatcagatcaagctcctgcggctccagcga
cacctccaggaggactttgacaagccctacctcgacctctctctgcacaacactgtctcc
actctgatccaggatggccaccacaagaaagctgagcagctgtaccgggagttcaagatc
cctgacaagcggtactggtggctgaagatcagtgccctggccacccgcggggactgggag
gagatggagaagttctccaagagcaagaagtcgcccattgggtacctgccctttgtggag
atcgctgtgaagcaccacaaccgctacgaggccaagaagtatgcaccccgtgtcacccct
gagcagcgggtcaaggccttcatccttgtgggggacctggagcaggcggctgacgctgcc
attgagcacaagaacgaagccgagatgaacctcgtcctgtccaagtgctctgcctccact
gacagcgccgtgatggagaagctgaaccgcgctcgtgctcagctcctgaagaagtga
DBGET
integrated database retrieval system
