Phasianus colchicus (Ring-necked pheasant): 116225645
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Entry
116225645 CDS
T07365
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin isoform X1
KO
K06548
sialoadhesin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116225645 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pcoc04090
]
116225645 (SIGLEC1)
04091 Lectins [BR:
pcoc04091
]
116225645 (SIGLEC1)
CD molecules [BR:
pcoc04090
]
Proteins
116225645 (SIGLEC1)
Lectins [BR:
pcoc04091
]
I-type lectins (Siglecs)
116225645 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
C2-set_2
BiPBP_C
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
116225645
NCBI-ProteinID:
XP_031443961
Ensembl:
ENSPCLG00000005993
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MEQGHRSPPDTPGNGEPTVPTPNSPGPSKAKKLLTVAALPQAGGGRDWPPNKEVLQLLAA
RPINRAAPRVGGRLVLHWGHPSPPPRTSSAGRTCPPAPRGTPAMSLLRWLVLLTGLDPAA
PSTWGVSYPETLHGVAGSCVVFPCTFSFPNDVSAAGGVVAIWYYDYEGQKAVVFHSNDQQ
VDSRFRGRTQLLGDPSASNCTLLLRGVQPQDSGKFRFRFEIVDGDRWSAVRDVVLRVEDT
PDPPSITSSGEVLEDTPVTLECSSPYGCPLGAITLRWVGFDPRVSALSSQVQMDARGVSR
HQNLTASFSWRDHSRALRCELLLGSHSASAELLLRVRHPPKGTEVSLDPPSHHVRVGDTL
TLSCTANSSHPPVSAFRWYKDGAAAGAGPILVLRGVRGQDHGRYHCEAQNAVGTGVAPAV
MLYVMSAEVSVSPAAEVQEGTATTLSCDVPGQEGRELNYTWYHNGAWLQQSPAHRVLLPR
IAASDAGFYSCTATDAWGSAASPALSLSVTYPPRPPVLTLLQEPHGGGLAVLRCVVDSRP
PAVLALYHGDNLVATSSSPVAPGRRRAVTAGRNALRMELREVRLRDGGLYRCTATNALGS
ASVTRPFSTRAPQVLIHPSQEVREGEAVTLRCVTPADAPGSPAFTWYRNGRRLAGRTEPV
LHLPAARGSDAGAFQCRPQSRGGAAKGDADDGDAGKGDADDGDADDGDADDGDAEDGDAD
DGDAAAAGDAVGDTSAAVLLRVLFPPRQPVLSSFLQRQGGQLGIIQCTVESEPEAELSLW
RGDEVVACTRGCSPAPSPRRSVAASYNSLRLELQDVVLQDEGTYVCRAGNAQGNASAAIA
FSAETARVAVSPSPRVLEGRAANLTCEVSSDSGTRPNITWYRNGQQLPAGPTAALLLPRV
TAGDAGLYHCVAVSGSSSRSSAAVLLDVLYPPRDPHLTAFLEAQRGRLAVFQASVASNPP
AELSLHHGEQLVASSSGGGHSPSPRVSAVAAPNALRVELREVTPEDEGSYRLTAANALGT
AVQQLFLRVQAARVLVTPSSEVLEGVDVSLTCEAPGQPAPGTIFSWYKDGAPVREGTDAV
MELPRISSAAAGSYHCKAHGPAGTNASVSPAVTLRVLYPPRVPVLSSLLEAPGGRGAVLQ
CHVDSRPPALLRLHKDGLLLASGLPSPSAAATRLSVTAATNSLRVGISGVQLEDEGEYEC
SASNAYGNASATANLTAGTAHLWISPSPDVLEGDTVNLTCAVHSAARDALTYTWFRDGVL
LSSGPDPTITILSATPAAAGSYRCAAHGPAGSRSTEPSALRVRYPPRNLRLKSFTKSSGG
RALILLCTADSSPPAELSLLRDGQPVAPGAAVGPRAPNALRVELPAATARDEGRYECRAR
SPLGSANTSVSVRVRAWRWGEVHPWCSVVWGDGDPRVSLGMRMEVRLPHGLDEDGGEVAP
RLWMRMETRLPHGTAVDLGNKALHGAAAPLTPSPAALRVRVLPAAEVREGTAVTLSCEDA
SPELGTTYAWLRNGRWLQEGPSATLLLPAARSGDAGTYSCVARMGARTQRADPAELRVLY
PPRQLSLVVLAERGGGRRELLCTVDSQPPSRLLLLRGRTALGSTQDPGLGAAPNALRLRL
EGPGAAGLHVCVANNSLGAANTSLLLAASGVRIAAEPSAEVPEGATVTISCSAGPGLGVE
ANYSWYKDHRWLRDGRRGSIVLGPVSSADSGFYQCRLSGAWGSESSAPLSLSVLRECPPP
PPPPPPPPPPPPRPLEQPALRRGIWGPQAMSSCGGRKGAGRARIPRGHPACFGEWMNPQR
HRGRRGGTGGDPTKSDLETPCFELWGGVGAGRGWGGQKTPSVVLGVGTLRPHGGCWDGTG
GDPTKSDLKTPCFELWGGVGAGRGWGGNEPQCGFGTGCTKNPMVGVGMAWEGTPGLGRA
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggaacagggacatcgcagccccccggacacccctggaaatggggagcccacggtgccc
accccaaacagccccggtccttcaaaggcaaagaaactgctgactgtggcagcacttccc
caagctggggggggcagggattggcccccaaacaaggaagtgctgcaacttttggccgct
cgccccataaatagagctgccccacgcgtggggggcagactggtgctgcactggggccat
ccctccccaccccccaggacgagcagtgcaggcaggacgtgtccccccgccccccgcggg
accccagccatgtccctgctgcgttggctcgtcctcctgaccggcctcgatcccgcagcc
cccagcacctggggggtctcctaccccgaaacgctgcacggcgtcgcgggttcctgcgtg
gtgtttccctgcaccttcagcttccccaacgacgtctcggccgccggcggcgtcgtggcc
atttggtactacgactacgaggggcagaaggcggtggtgttccactccaacgaccaacag
gtggattccaggttcaggggccgcacgcagctcctgggggaccccagcgccagcaactgc
acgctgctgctgcgtggggtgcagccccaggacagcgggaagttccgcttccgcttcgag
atcgtggatggggaccgctggtcggcggtgcgggacgtggtgctgcgggtggaggacacc
ccggatcccccgagcatcaccagcagcggggaggtgttggaggacacgccggtcaccctg
gagtgctcgtctccctacggctgcccgctgggtgccatcaccctgcgctgggtgggtttc
gacccgcgtgtgtcagcgctgtccagccaggtgcaaatggacgccagaggggtcagccgc
caccagaacctcacggcgtccttctcctggagggatcactccagggcgctgcgctgcgag
ctgctgctcggctcccacagcgcgagcgcggagctgctgctgcgggtgcgacaccccccc
aaaggcaccgaggtgtccctggaccccccctcacatcacgtccgtgtgggcgacacgctg
accctcagctgcacggcgaacagcagccaccctcccgtcagcgccttccgttggtacaag
gatggcgcagccgcgggcgcggggcccatcctggtgctgcggggcgtgcggggccaggac
cacgggcggtaccactgtgaggcacaaaatgccgtcgggaccggagtggcacccgctgtg
atgctgtatgtcatgtccgcagaggtgtccgtcagccccgcggctgaggtgcaggaaggg
acggccaccactctgtcctgcgacgtgccgggccaggagggccgggagctgaactacacg
tggtaccacaacggtgcgtggctgcagcagagccccgcacaccgcgtgctcctcccgcgc
atcgccgcctccgacgccgggttctattcctgcacggccaccgacgcgtggggcagcgcc
gcgtccccggccctcagcctcagcgtgacgtaccccccccggccccccgtgctgacgctg
ctgcaggagccgcacggcggggggctggcggtgctgcgctgcgtggtggacagccgccct
ccggccgtgctggccctgtaccacggggacaacctggtggccaccagcagctctcccgtg
gcccccgggcggcgcagggcggtgacggccggccgcaatgcgctgcgcatggagctccgc
gaagtgcggctgcgggacggcgggttgtaccgctgcaccgccaccaacgccctgggcagc
gcctccgtcacacggcccttcagcacccgtgccccccaggtgctgatccacccctcccag
gaggtccgtgagggtgaagccgtcacactgcgctgcgtcacaccggcggacgccccgggg
agccccgccttcacctggtaccggaacggccggcggctggcggggcgcacggagccggtg
ctgcacctccctgccgcgcgtggcagcgacgccggcgccttccagtgccgaccccagagc
cgtgggggtgctgctaagggggatgctgacgatggggatgctggtaaaggggatgctgac
gatggggatgctgacgatggggatgctgacgatggggatgctgaggatggggatgctgac
gatggggatgctgccgctgctggggatgctgttggagacacatcggcggccgtcctgctg
cgggtgctcttccccccgaggcagccggtgctgagctccttcctgcagaggcagggcggg
cagctgggcatcatccagtgcacggtggagagcgagccggaggctgagctgagcctgtgg
cggggggacgaggtggtggcctgcacgaggggctgcagcccggcccccagcccacggcgg
agcgtcgctgcctcgtacaacagcctgaggctggagctgcaggacgtggtgctgcaggat
gagggcacctatgtgtgccgggctgggaacgcgcagggcaacgccagtgcagccatcgcc
ttcagtgctgagactgcccgtgtcgcggtgtccccgtccccccgcgtgctcgagggccgt
gctgccaacttgacgtgtgaggtcagcagcgactccgggacccgtcccaacatcacctgg
taccggaacgggcagcagctccccgctggccccactgcagccctgctgctgccacgggtg
acagctggggacgcggggctgtaccactgcgtggccgtcagcgggagcagcagccggagc
tccgctgctgtgctgttggatgtgctgtacccccccagggacccccacctcaccgccttc
ctggaggcgcagaggggccggctggccgttttccaggcgtcggtggccagcaaccccccg
gccgagctgtccctgcaccacggggagcagctggtggcctccagcagcggcggggggcac
agccccagcccacgggtcagcgccgtggccgcccccaacgctctgcgggtggagctgcgg
gaggtgacgccggaggacgagggcagctaccgcctcaccgccgccaacgcgctcggcacc
gcggtgcagcagctcttcctccgcgtgcaggccgcccgcgtcctggtgacgccgtcctca
gaggtgctggagggggtcgatgtgtccctgacgtgtgaggcgcccgggcagccggcgcct
ggcaccatcttctcctggtacaaggatggggcgcccgtgcgtgagggcaccgacgctgtc
atggagctgccccgcatcagcagcgccgccgccggctcctaccactgcaaagcccacggc
cccgcggggaccaacgccagcgtgtcccctgccgtcaccctgcgtgtcctctaccccccc
cgggtcccagtgctcagctccttgctggaggctcccggcgggcgcggcgcagtgctgcag
tgccacgtggacagccgccccccggctctgctgcggctgcacaaagacgggcttctgctg
gcctccggcctgccgtccccatcggccgccgccacgcggctcagcgtcaccgcggccacc
aacagcctgcgggtgggcatcagtggggtgcagctggaggacgagggagagtacgagtgc
tctgccagcaacgcctacggcaacgccagcgccaccgcaaacctgacagcaggcaccgcc
cacctctggatctctccatccccggacgtcctcgaaggtgacaccgtcaacctgacctgc
gccgtccacagcgcagcccgggacgctctgacctacacgtggttccgggacggggtgctg
ctcagctccggccccgacccgaccatcaccatcctcagcgcgacccccgccgccgccggc
tcgtaccgctgcgcagcgcacggccccgcgggcagccgcagcacggagcccagcgctctg
cgggtgcgataccctccccgcaacctgcggctgaaatccttcaccaagagcagcgggggc
agagccctcatcctgctctgcaccgccgacagcagccccccggctgagctcagcctgctc
agggacgggcagccggtggcccccggtgccgccgtggggccccgagcgcccaacgcgctg
cgcgtggagctgccggcggccaccgcgcgggacgagggccgctacgagtgccgggcacgc
agccctctcggcagcgccaacacctccgtcagcgtccgagtgcgggcatggagatggggt
gaggttcacccatggtgctccgtggtgtggggtgatggtgatccacgtgtgagcttgggg
atgaggatggaggtgaggttgccccatggcttggatgaggatggaggtgaggttgcccca
aggctgtggatgaggatggagacgaggctgccccatggcacagctgtggatctcggcaac
aaggcgctccacggagctgcagcacccctaaccccgagccctgcagccctcagggtgcgg
gtgctccctgccgccgaggtccgcgagggcactgcggtcacactgagctgcgaggacgcg
tcccccgagctgggcaccacgtacgcgtggctgaggaacgggcggtggctgcaggaaggt
ccctccgccaccctgctgctccccgccgcccgcagcggcgacgcgggcacctacagctgc
gtggccaggatgggagcgcgcacgcaacgggccgaccctgccgagctgagggtgctgtac
cccccccggcagctttccctggtggtgctggcagagaggggcggcgggcggcgggagctg
ctgtgcacggtggacagccagcccccctcccgcctgctgctgctgcgcggccgcacggcg
ctgggctccacgcaggaccccgggttgggggcggctcccaacgccctgcggctgaggctg
gaggggccgggggctgcggggctccacgtctgcgtggccaacaacagcctgggagctgcg
aacacgtctctgctcctcgctgccagcggcgtccggatcgcggccgagccgtccgcggag
gtccccgaaggcgccaccgtcaccatcagctgctcggccgggccggggctgggggtcgag
gccaactacagctggtacaaagaccaccgctggctgcgggacggccggcgcggctccatc
gtcctcggccccgtgtccagcgccgacagcggcttctaccagtgccggctgagcggggcg
tggggcagcgaatcctcggcgccgctcagcctcagcgtgctgcgtgagtgcccccctcct
cctcctcctcctcctcctcctcctcctcctcctcctcgccctttagagcagccagcccta
cggagggggatttggggaccccaagccatgagcagctgcggggggaggaaaggggcaggg
agggcgagaatcccacggggtcaccccgcgtgctttggggaatggatgaacccacaacgt
caccgggggcgtcggggtggcacggggggagaccccacaaagtcagatttggagacccca
tgctttgagctttggggtggggtgggagcagggaggggctggggagggcagaaaaccccc
agtgtggttttgggagttggcacactgagaccccatggtgggtgttgggatggcacggga
ggggaccccacaaagtcggatttgaagaccccgtgctttgagttgtggggtggggtggga
gcaggaaggggctggggaggaaatgaaccccaatgtggttttgggactgggtgcaccaag
aatcccatggtgggcgttgggatggcatgggaggggaccccagggctgggaagggcatga
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integrated database retrieval system
