Phasianus colchicus (Ring-necked pheasant): 116225710
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Entry
116225710 CDS
T07365
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116225710 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116225710 (POLR1A)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116225710 (POLR1A)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116225710 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
Nop14
Motif
Other DBs
NCBI-GeneID:
116225710
NCBI-ProteinID:
XP_031444080
Ensembl:
ENSPCLG00000001394
UniProt:
A0A669P654
LinkDB
All DBs
Position
Unknown
AA seq
1711 aa
AA seq
DB search
MRPPKVVPWWRFAKVSFGLYSAEEIRKLSVKAITNPQYLDNVGNPSVNGLYDLALGPPDS
KEACATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEHGLLHAVHDLEVILNRFLEQSADATALEIEEELNHHVDEILQSQELSDQCSN
VKNVCECRNRLISQFWKAHMTSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVFHKAGEEGV
MDEPVAIDETQLGKRGYLTPMTAKEFVLALWKNEGFFLRYLFPGMDPHKDSAFSPDMFFL
DLLVVPPSRYRPVNRVGDRMFTNGQTVNLQAVMKDATLIRKLLVFMAKEQCQPIKIAEDK
IQTETGENDEPLDRSVLATIPGQTIADKLYNAWIRLQTHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVC
RHIKSGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QNELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTTRGCFFTREQYMELVYR
GLTDKKGRIKTFPPAIMKPQRLWTGKQVVSTLLINIIPENYVPLNLTGKAKIGGKAWMKG
PANRCLNLDSMCESQVIIRGGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLTCL
GRLFTAYLQLYRGFTMGIEDILVKPEADRKRHKIIRRSNQCGIEVVRAALNLPETASCED
VQGKWQDAHLCKDQRDFNVVDLKFKEEVNNYNNEVNKVCMPFGLHRSFPENNLQLMVQSG
AKGSTVNTVQISCLLGQIELEGRRPPLMPSGKSLPCFQPYDFSPSSGGFVTGRFLTGIKP
SEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGE
DGLDIPKTQFLQPEQFPFIADNYEVIQKTNHLNEALARMESHQAKQQFKAIRKWWARHQN
SVQREGGFLLFSQKKMASVKTQTSGGESKNGRDPATLQLLKMWYELDEKKRRKYLKKANK
CPDPSLAVWRPDSYFASVSETFENGVEDYINKRESKKGGDCMQPALSSDRLRDLLYLKWQ
RSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKT
PMMSVPVLNTKKAHKKVKQLKKQLTRVCLAEVLQKVELEESLHLKNKENSHRLYKIKFCF
LPHKYYREEKCVKPRDILHFMETRFFKIFLEAIRRKRAKMSSFTEVSTRKATRKDVEDVG
DKAQNNQEAPEGEEEEKIVDAEPDEGDGDATEAKMRRNQEEEVDYESEEENGEENNAENP
EDEEGESEKEERAQDADEEDQNEADGDHSQHLSFMSQTKKDRAQLLKSAEVRVNAVVDSH
PSIQDYTFDTENELWCEVSLTLPLMKVYFDISSLLLSLTRNTVIHEVKGITRCLLNESTN
EKGEKELILQTEGINLAEMFRYADILDLNRLYSNDIHAMAKNYGIESALRVLIKEIKDVF
AVYGIVVDPRHLSLVADYMCFEGVYKPMNRFGIQSSSSPLQQMTFETSYKFLKEATMMGA
YDELRSPSACLVLGKVVKGGTGLFDLKQPLT
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaagtggtgccgtggtggcggttcgccaaggtctccttcgggttgtac
agcgccgaggagatcaggaaactgagcgtaaaagccataacgaaccctcagtatttggat
aacgtgggcaatccttctgttaatggattgtacgacctggctctggggcctcctgattcc
aaagaagcgtgtgcaacctgcatgcagaacttcagcaactgcccagggcactttggccat
atagaactgcctctgactgtctacaaccctctgttttttgataaactataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcatttgctg
ctaagtcagctgaaggttctggagcatgggttgcttcatgctgtccatgatcttgaagtc
atcttaaataggtttttagagcaaagtgcagatgcgacagctctagaaattgaagaagag
ttaaatcaccatgttgatgaaatactgcaaagtcaagaactgagcgatcagtgttcaaat
gtgaaaaatgtttgtgagtgtagaaatagattgatatcccagttctggaaagcacatatg
acttcgaagaaatgcccaaactgcaaatcaaggagatcactggtgcgaaaagagcataac
agcaagctgacagtaacttatccttctacagtgtttcataaggcaggagaggaaggtgtc
atggatgaaccagtagctattgatgaaactcagttagggaagagaggatacctgacacca
atgactgccaaggagttcgtcttggctctgtggaagaatgaaggtttctttctgcgttac
ctcttccctgggatggatccccataaggactcagctttcagcccagatatgtttttttta
gatctgcttgtggttcctccttcaaggtatcgtcctgtaaatcgtgttggagaccgaatg
tttacaaatggtcaaactgtgaacctgcaggctgtcatgaaggatgccaccctgatcagg
aagctcttggttttcatggcaaaagaacaatgccagccaattaaaattgcggaagacaaa
atccaaacagagacaggtgagaatgatgagcctctggaccgttctgtgctggcaacaatt
ccaggacagaccattgcagacaagctttataacgcttggattcgtcttcagacccatgtc
aacattgtgtttgacagtgacatggacaaactaatgactgagaaataccctggtattcgt
cagctattagagaaaaaggaaggactgttccgcaagcacatgatgggaaaacgtgtggat
tttgcagctcgatcagtcatttgccctgatatgtacattggtaccaatgagattggcatt
cccatggtatttgctaccaaactcacctaccctcagccagtcactccctggaatgtcaaa
gagctgaggcaggctgtcataaatggcccaaaggttcaccctggggcttccatggttatt
aatgaagatgggtctcgtacggtgctgagtgcaagcagcttgacccagagagaagccata
gctaagcagctcctcacgccttcttctggtgcaccccagtcaggactgaagattgtttgc
cgtcatattaaaagtggagatgtcctgttactgaaccgccagcccactcttcatagaccc
tccatccaagctcaccgggccagaatcctgcctggagagaaggtgctgaggctgcactat
gccaactgcaaggcatacaatgctgattttgatggtgatgaaatgaacgcccatttccca
cagaatgagctgggtagggcagaggcctacaccttagcctttactgatgaacagtatcta
gttccaaaggatggcaaaccacttcctggattgatccaggaccacatgatttctggagtc
agcatgacaacccggggctgctttttcacaagagagcaatatatggagcttgtttatcga
ggactaacagacaagaaaggaagaattaaaacctttcctcctgccattatgaaaccacaa
cgattatggacaggaaagcaggttgtttctacattgttaataaatatcatcccagaaaac
tatgtcccactgaatttgactgggaaagctaagataggtgggaaagcctggatgaaggga
cctgcaaacagatgtttaaatcttgactcaatgtgtgagtctcaggttattattagaggt
ggggaattactttgtggtgtgctggacaaagctcattttggcagctctgcctatggccta
gtccactgctgctatgaaatctatgggggtgaaaccagtggaaaagtgctaacgtgtctg
ggacgcctctttactgcttatctgcagctctacaggggatttacaatggggattgaggat
atcttggttaaacctgaagcagaccgtaaaagacacaaaatcatcagaaggtcaaaccag
tgtggtattgaagttgttagagcagctcttaatttgccagaaacagcatcatgtgaagat
gtccaagggaaatggcaggatgcccatctctgcaaagaccagagagattttaacgtggtt
gacctgaaattcaaggaggaagtaaacaattacaacaatgaagttaacaaggtttgcatg
ccatttggtctgcataggagctttccagagaacaatttgcaattgatggtacagtcagga
gccaaaggatccactgtaaatacagtacagatttcttgtttgctgggccagattgagttg
gaaggtcgaaggcccccgctgatgccgtctggcaaatctctgccgtgtttccaaccttat
gatttttcccctagctcaggaggatttgtgactggcagatttctcactgggatcaaacct
tctgaattcttctttcactgcatggctggcagggaaggtcttgtggatacagctgtcaaa
accagccgttctgggtacctacaaaggtgtatcataaagcatttggaagggctggtggtt
cagtatgacctgactgtacgggacagcgatggcagtgtggtgcaatttctgtatggagaa
gatgggcttgatatccctaaaactcagttcttgcaacccgagcagtttcctttcattgct
gataactatgaggtgatccagaagacaaatcatctgaacgaagccttagcaaggatggag
tcacaccaagcgaagcagcagtttaaagccatcagaaagtggtgggccaggcaccaaaac
tctgtgcagagagaaggaggttttctgttgttttctcaaaagaaaatggcaagtgtaaag
acacaaacctcaggaggagaaagcaaaaatggaagagatcctgctactttacagttattg
aagatgtggtatgaactagatgagaagaaacgaagaaagtatctaaagaaggcaaataag
tgtcctgacccaagtcttgctgtttggcgtccagattcctactttgcatctgtgtcagaa
acgtttgaaaatggagttgaagattatatcaacaaacgagaaagtaagaagggaggagat
tgcatgcaaccagcactttcttctgatagattaagggatttgttatatttgaagtggcaa
cggtctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggag
ccttccacacagatgactctgaacaccttccattttgctggcagaggtgaaatgaatgtc
acgttgggtattccaaggttgcgggagatcttgatggtagccagtgcaaatattaaaaca
ccaatgatgagtgttcctgtgctcaataccaagaaagctcacaagaaggtgaaacagctc
aagaaacagctcacaagagtgtgcttagctgaggtattgcagaaagttgagttggaggaa
tccctgcacttaaagaacaaggagaacagccatcgcctctacaaaatcaaattctgcttc
ttgccccacaaatactatcgagaggagaagtgtgtgaagcccagggacatcttacacttc
atggaaacaaggttctttaaaattttcctggaagccatcagaaggaagcgtgcaaagatg
tcatcttttactgaagtcagtactcgcaaagcaactcgtaaagatgtagaagatgttgga
gacaaggcacaaaataatcaagaagctccagaaggtgaggaagaagaaaagattgttgat
gcagaacctgatgaaggggatggtgatgctacagaagcaaaaatgaggaggaaccaggaa
gaagaggttgattatgagagtgaagaagagaatggggaagaaaataatgctgagaatcca
gaagatgaagagggtgaatcagaaaaggaagagagggcccaagatgctgatgaagaagat
caaaatgaagcagatggtgatcattctcaacacctttcctttatgtctcagactaaaaaa
gacagagctcaattacttaagtcagcagaggtgcgagtaaatgcagttgtggacagccac
ccatctatacaggactacacgtttgatactgaaaatgaactttggtgtgaggtttcattg
acgcttccattgatgaaggtgtactttgatatctcctctttgcttctttctctcacacga
aacacagtcatacatgaagtgaaggggatcacgcgatgcctgttgaatgaaagtaccaat
gagaaaggagagaaagaactcattctgcagactgaagggataaatcttgcagagatgttc
agatatgctgatattttggacctgaacagactttattccaatgatattcatgccatggct
aagaattatggtattgagtctgccctgagggtccttataaaggaaataaaagatgtattt
gctgtctatggcattgtggtagaccctcggcacctctcgcttgtggcagactacatgtgt
tttgaaggagtttataaacccatgaatcgctttggaatccagtccagttcctcccctctg
caacagatgacatttgaaaccagttacaaattcctgaaggaagcaacgatgatgggtgcc
tatgatgaactgagatccccttctgcatgcctggtgcttggaaaagttgttaaaggaggg
actggtttgtttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
