Phasianus colchicus (Ring-necked pheasant): 116226138
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Entry
116226138 CDS
T07365
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116226138 (LRBA)
Membrane trafficking [BR:
pcoc04131
]
Endosome - Lysosome transport
Others
Others
116226138 (LRBA)
Endosome - Golgi transport
116226138 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116226138 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
116226138
NCBI-ProteinID:
XP_031444747
Ensembl:
ENSPCLG00000001968
LinkDB
All DBs
Position
Unknown
AA seq
2847 aa
AA seq
DB search
MASDGKQVVQPTGDGGGGAGKEGNAGEGGSVLQPLNPGVPIRGIRMKFAVLAGLVEVGEV
SNRDIVDTVFNLLVGGQFDLEMNFIIQEGEGITCMVELLDKCDISCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVLKRIDRADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTNDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLDEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSVQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQDQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHNGAPLLKQLCDHILLNPAIWIHIPAQVQLILYTYLSTEFIG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPEGIDGPRPTQKETLSLRAFLLM
FIKQLVMKDYGIKEEELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMVPAFDQRNG
LQVIYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMLGHGLFSLLAERLMLHTNLIT
MTTYNVLFEILTEQICTQVIHKQHPDPDSTVKIQNPQILKVIAILLRNSPQSPETLEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTVFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYGEYQEKGGEGSVICPSAPIRTISG
VGKGAEIVEKKQCLELKEAATAPPFHDDMGSRTEKNESDGDQQTPSVSQQRKDLKNEDRE
TMQDLKTVPCSELSPEPEAIKPSVSEISSGIAEAIEDSLSRAHELEEETATVTATSSVME
TSLEGETHEIPEMERSAVEDEDDFVDLKEESSMPLPSEEFAETDRKHSSNENEETKQEKA
IQQQLESVLLKSEDTGGMDGQNKELALSETVSSSAEVVNQLNSEGKKKLEEEKVLYSETR
TAEDTNAHVPEHAGCSEKRIARLDVSSVASDTERLELKANTRLEAPLPPRSLPEMSRQQD
SSGQELAATSDGQRRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQMWRSHSTKTVM
DFVNSSDNVIFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELENIEATQGLSIEA
SLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAIAVRNCLECQQHA
QVKPIGDVAKNQKTMQGFIGAGKSAAKSPVDIVTGGISPIRDLDRLLQDMDINRLRAVVF
RDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNHSQSFKESENENGTSAAD
VEHPSAALGALTSASTEDSECTASVQRRDSGLGEEPASEQTNSLGGVAEAGALSVSAGPD
AVSEVLCTLSLEVNKSQEDRGETGPEDSKPSASVPAAKNVNVKDILRSLVSTPADGTAVD
PALLPSAFLGVLGDGAAEQPIQFHSFDRSVVVPPKKSNISSTAAAVGIPANAVSVVSSLD
SAQAPDLSGESPGRRSSNSKLPSVPTVSSVPEDSASNMSITDRLEHALEKAAPLLREIFV
DFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIE
LVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDINRHAEFESLCAQYSADKREEEKMCH
HLITAAKYRDQVTATQLIQKIVNILTDKHGAWGSSAPSRPREFWRLDYWEDDLRRRRRFV
RNPLGSTHPEATLKAAGEHAPDEDILVKGKQSIKSQALGNQNSESEILLEGDDDITSFIE
EREVENLTGPVALSAPAQLVAPSVVVKGTLSITLSELYFEVDEEDPSFKKIDPKILAYTE
GLHGKWLFSEIRAIFSRRYLLQNTALEIFMANRVGVMFNFPDQATVKKVVNCLPRVGIGA
TFGLPQTRRISLASPRQIFKASHMTQRWQHREISNFEYLMFLNTIAGRTYNDLNQYPIFP
WVLTNYESDELDLTLPSNFRDLSKPIGALNPKRAAFFAERYESWEDDQVPKFHYGTHYST
ASFALAWLLRIEPFTTLFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYL
PEIFVNSNNYNLGVMDDGTVVSDVELPPWAKTPEEFVRINRLALESEFVSCQLHQWIDLI
FGYKQQGPEAARSLNVFYYLTYEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHP
PRSSAMQVYLLLQSPLMFTDQAQQDVIMVLKFPSNSPVTHVAANTQPGLTNPAVITVTAN
RLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQITDLLDQSIQVHSQCFV
ITSDNRYILVCGFWDKSFRVYSTDSGKLMQVVFGHWDVVTCLARSESYIGGNCYILSGSR
DATLLLWYWNGKTNIVGDNPRGDFATPRAILTGHDYEITCATICAELGLVISGSKEGPCL
IHSMNGDLLRTLEGPETLEGPENCLRPKLIQASREGQCVIYYENGLFCVFSVNGRLQATM
ETNDKIKAIQLSRDGQYLLTGGDNGVVMIWQMWDLKKLFAYPGCDAGIRSMALSYDQRCI
LTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacggcaaacaagttgtgcagccaacaggtgatggcggaggaggagcgggg
aaagaaggaaacgccggcgaagggggaagcgtactgcagcctctgaatccaggggtcccc
atccgaggcatcaggatgaagtttgccgtgctggcggggctggtggaggtcggtgaggtg
tcgaacagagacatcgtggatacggtattcaatctgcttgttggaggccaatttgacttg
gaaatgaactttatcatccaagaaggagagggcattacctgcatggtagaattgctggat
aaatgtgacatctcctgtcaggctgaggtgtggagcatgtttacagctatcttgaaaaaa
agtatacgcaatctacaagcgtgcacagaagtgggactggttgaacaagtgcttaagagg
attgatagagctgacaacatgattgcagatctcttagtggatatgctgggtgtgttggcc
agctacaacttgacggttcgagagctaaagttattcttcagcaaacttcaaggagaaaaa
gggagatggccaccacacgctgggaaattgttgtctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccggggaaaagtgctgcagccattgccttacct
cctatagccaagtggccctatcagaatggatttacttttcacacttggttaagaatggat
cctgtaaacaatatcaatgtggataaggataagccatatctatattgttttcgaacgaac
aaaggacttggctattctgctcactttgttggtggctgcttgattgtaacgtccataaaa
tcaaagggaaaaggttttcagcattgtgtaaaatttgatttcaagccacaaaagtggtat
atggttactattgtgcacatctataaccgctggaagaatagtgaacttcgatgctatgtg
aatggggaactggcatcttatggagaaataacatggtttgtcaacaccaatgacacattt
gacaaatgtttcctgggttcctcagaaacagcagatgccaatcgagtgttttgtgggcaa
atgacatctgtttacctttttagtgaggctctcaatgctgctcaaatctttgccatttat
cagcttggtctgggatataagggaacattcaaattcaaggcagaaagtgatctcttcctc
gatgaacatcacaaattgttgctgtatgatggcaagctatccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctctgtctagagtcatcccctaaagataaccct
tctatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttgaca
cattctgtccaaagtgccttgcattccatcggaggagtgcaggtactttttcctctcttt
gcacagctagactataggcaatattcatcggaccacatcgacacaactgtttgttcaact
ttgttggcttttattatggagttgttgaagaactcgattgctatgcaagatcaaatgctt
tcctgtaagggcttccttgtgataggatatagcttggaaaagtcttccaaagctcatgtt
acccgagctgtactagagctatgccttgctttttctaagtacctgagcaacttgcacaat
ggggcgcccttgctgaaacagctatgtgatcatattctccttaatcctgcaatatggatt
catatcccagcacaggttcagctgatcctatacacttacttgtctactgagttcattggc
actgttaacatatatggtgcaattagacgggttgggacagttcttttggtcatgcatacc
ctgaagtattattactgggtagtgaatcctcaagatcgcagtggtataactcccgaaggc
atagacgggccacggcctactcaaaaagagactttatctctgcgagcgtttttgttgatg
ttcattaaacaactggtgatgaaggactatggaataaaagaagaagaattgcaggcaatc
ctcaattatctactcactattcatgaggatgacaatctaatggatgtcctgcagttgctt
gttgctctcatgtcagagcacccaagttctatggtccctgcttttgatcagaggaatgga
ttacaggtcatctacaagcttttagcatcaaaaagtgaaggcatcagggtgcaagctctg
aaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaaatcatgctt
ggacatggattgttttctttgctggctgaaaggctgatgcttcatacaaacttgatcacc
atgaccacatacaatgtcttatttgagattctgactgaacagatttgtactcaagtgata
cataaacaacatcctgacccagattcaacagtgaagatacaaaatcctcagattttgaag
gttattgccatcctgctacgtaattctccccagagtccagaaacattggaggttcggcga
gcctttctctcagatatgattaaactttttaataacagcagagaaaataggaggagtttg
ttgcagtgctccgtttggcaggagtggatgctttctctttgctgttttaatcccaagact
tcagaggagcagaagataactgagatggtgtatactgtttttcgtattttgctgtaccat
gctatcaagtatgagtggggtggctggcgtgtttgggtggatacactgtctatcacacat
tcaaaggtaacctttgaaatgcacaaagagagtctttctcaaatgtacggggaataccaa
gagaagggaggtgaagggagtgtaatatgtccttcagctccaattagaacaatttctgga
gttggcaaaggagctgaaattgtggaaaagaagcaatgtttggaattaaaagaagctgct
actgctcctcccttccatgatgatatggggtccagaactgaaaaaaatgagtcagatggt
gaccagcaaactccttcagtctctcagcaaaggaaggacttgaagaatgaggacagggaa
actatgcaggatctaaaaacagtgccttgttcggaactttctccagagcctgaagcaata
aaacccagtgtttctgaaattagtagtggaatagccgaagcaattgaagattctctgagc
agagctcatgagcttgaggaggaaacggccactgttactgcaacttcttcggtaatggaa
acttctttggaaggagaaactcatgaaattccagaaatggaaaggtcagcagtggaagat
gaagatgactttgttgatttgaaagaggaaagtagtatgcctttaccttccgaagagttt
gcagaaactgacagaaagcatagctctaatgaaaatgaagagacgaagcaggaaaaggca
atacaacagcaacttgaatctgtgcttttaaagtctgaagatactggaggcatggatggg
caaaacaaagaactggctttatcagaaacagtcagttcttcagctgaagtagtgaatcaa
ctgaattcagaagggaaaaagaaactagaggaagaaaaggtgctttatagtgaaaccaga
acagctgaagataccaatgcacatgtaccagagcatgcaggatgctctgaaaaaagaatt
gccaggcttgatgtttctagtgttgcatctgatacagaaagactggaactgaaagccaat
acacgtctcgaagcacctctgccccccagatcgctacctgagatgtcaaggcagcaagat
tcttcaggacaagagctagctgctacatcagatgggcagagaagagactctagatcaact
gtgtttcgcattcctgagtttaagtggtcactgatgcatcagcgcttgcttacagacttg
ctcttttccattgaaacagatatacagatgtggagaagtcattctacaaaaactgtaatg
gactttgtgaatagcagtgacaatgtcatatttgtacacaataccattcacctcatctct
caagtgatggacaacatgatcatggcttgtggtggcatattgccactgctttctgctgcc
acgtctgctactcatgaattggagaacattgaggcaactcaaggactctcaatagaagct
tctttaacatttctccagagattaattaatcttgtagacgtgttaatttttgcaagctct
cttggtttcactgaaattgagtctgagaaaaatatgtcatctggaggaattctacgacaa
tgtcttcgtctggtatgtgccatagcagtaagaaattgcttggagtgtcagcaacatgca
caggtgaagccaattggagacgttgcaaagaaccaaaaaacaatgcaggggtttatagga
gcaggaaagtctgcagcgaagagtccagtggacattgtgactggtggaatttctccaata
cgagaccttgacagacttctgcaggacatggatattaatagacttcgagcagtagtgttc
agagatatagaggatagtaaacaggctcagttcttggccttggcagttgtatattttatt
tctgtactcatggtttcaaaatacagagatattctggaaccccagaatgaaagaagacca
ccaaaccacagtcagtcattcaaggaatcagagaatgaaaatggaacttcagctgcagat
gtggaacatccatctgctgctcttggtgctttaacttcagcttccactgaagattcagag
tgtacagcatctgtacaaagaagggactctggtcttggggaggaaccagcttcagagcaa
acaaacagtttgggcggtgttgctgaggcaggagctctgagtgtcagtgcaggtccagat
gctgtcagtgaagtactgtgcaccctgtccttagaagtaaataagtctcaggaagacaga
ggtgagactggaccagaggacagtaagccttcagcttctgtgccagcagcaaaaaatgtt
aatgtaaaggacattctgcgaagcttagtaagcacaccagctgatgggactgcagttgat
cctgctcttctgccatctgcctttcttggagttcttggtgatggagctgctgagcagcct
atacagttccattcatttgacaggagtgttgtagtaccacccaagaaatcaaacatttcc
tctactgcagctgctgtgggtattcctgcaaatgctgtcagcgtggtttcttctttagat
tcggcacaagccccagatttgtcaggagaatctcctggaaggcgttcatctaattcaaaa
ctgccatctgttcctacagtttcttcagtgcctgaggattctgcttcaaatatgagtatt
acagacagacttgaacatgctttggaaaaagctgccccacttctgagagagatttttgtg
gattttgctccctttctttctcgaactcttttgggcagccatgggcaggagttgctgata
gaaggtacaagccttgtgtgtatgaaatctagcagttcagttgtggagctggtgatgctt
ctttgctcacaggagtggcagaactctatacaaaagaatgctggccttgcttttatagag
cttgtcaatgaaggaaggttgttgagtcagactatgaaggaccatttggtcagagtggct
aacgaagcagaatttatcttgagcagacagagggcagaagatattaaccgacatgctgaa
tttgagtcactgtgtgcccagtactctgctgacaaacgggaagaagagaaaatgtgccat
catttgataacagcagctaagtaccgagaccaagtgactgcaactcagctaatacagaaa
attgtcaacattctaacagacaagcatggagcctggggaagctctgcgccaagtcgtcct
cgtgagttctggcgccttgactactgggaagatgacttgcggcgccggcgacgatttgtg
cgtaacccccttggatcgacacatcctgaagcgacactaaaagcagccggagaacatgct
cccgacgaagatatacttgttaagggaaagcagtctatcaagagtcaagccttaggaaat
cagaactcagaaagtgagattctcttggaaggcgacgacgatatcacgtcattcattgag
gagagagaagtggagaacctaacaggtccggttgccctgagcgcgccagctcagctggtg
gcaccctcggtggtggtgaaaggcactctgtccatcactctttccgagctctacttcgag
gtggatgaagaagatcccagttttaagaaaatcgacccgaagattctggcatatacagaa
ggactccatggcaaatggctcttttcagagattcgtgctatcttttcccgacgctatctt
ctgcaaaatacggcgctggagattttcatggcaaatagagtgggtgtcatgttcaacttt
cctgaccaagcaacagtaaagaaagtggttaactgtctacctcgggttggtattggggct
acctttggactacctcagaccagacgcatttctttggctagtccacgacagattttcaaa
gcttcccatatgacccagcggtggcaacaccgagaaatttccaactttgaatacctgatg
tttctaaacacaatagcaggtcgcacttacaatgatttaaatcagtaccctattttccct
tgggttcttaccaactatgaatcggatgagttggaccttacgctccctagcaacttcaga
gatttgtcaaagcctattggagctttgaacccaaagagagcagcgttctttgctgagaga
tatgaatcatgggaagatgatcaagttccgaagtttcactacggtacacattattcaact
gcaagttttgcacttgcgtggttattaagaattgaaccctttacaacacttttcctaaat
ctgcaaggtgggaagttcgatcatgcagatagaaccttttcatctatttcaagagcatgg
cgcaacagtcagcgtgacacttctgatatcaaggaattgattcctgaattctattacctc
ccagagatatttgtcaacagcaacaattacaatctaggagtgatggatgatggaacagtt
gtgtctgacgttgaacttccaccatgggccaaaaccccagaagaatttgttcgcataaac
agactggcgttagaaagtgagtttgtttcctgccagcttcaccagtggattgatctgatt
tttggctacaaacagcaagggccagaggctgccagatccctgaatgtgttctactatttg
acatatgaaggagctgtaaatttaaattcaataacagatcctgtattgagagaggctgtg
gaagctcaaatacgaagttttggacagaccccttcccaactgctcatagaaccacatcct
ccaagaagttctgccatgcaggtgtatctcctcctgcagagcccgttgatgttcacagac
caagctcaacaggatgttatcatggttctaaagttcccatccaactcccctgtcactcat
gtagcagccaacacccagcctggtctgaccaatcctgctgtgatcacagttactgcaaat
aggctatttgctgtaaataagtggcataatcttcctgctcatcaaggtgctgtacaagac
cagccttaccagctgccagtggaaatcgatcctctcatagccagcaatacaggtatgcac
agaaggcaaatcactgaccttttagaccaaagcattcaggtacattcccagtgttttgtc
atcacctctgacaatcgttatatcttggtttgtggcttctgggacaagagtttccgagtt
tattctaccgattcaggtaaactgatgcaagtagtatttggacactgggatgttgtcacc
tgtcttgctcgttctgagtcgtatattggaggaaattgttacattctgtcaggatctcgt
gatgcaacattgctgctctggtactggaatggcaaaaccaatatcgttggtgataatcca
agaggtgattttgcaactcctcgagccattttgacaggacatgactatgagatcacctgt
gctaccatttgtgctgaacttggcttagtaataagtggttcaaaagaaggaccatgtctc
atacattctatgaatggagatttgctgaggacgttagaaggtcctgaaacattagaaggt
cctgaaaattgcctgagaccaaaacttattcaagcttcaagggaaggccagtgtgtcata
tattatgaaaatggccttttttgtgtattcagtgtgaatgggagacttcaagccactatg
gaaacgaatgacaagatcaaggcaattcagctgagtagagatggacagtatttgcttacg
ggtggagacaatggagttgtcatgatatggcagatgtgggacctgaagaagctttttgct
tacccgggctgtgacgctggaatccgatccatggccctgtcatatgaccaaaggtgcata
ctgactgggatggcatcggggagcatagtggttttctacaatgacttcaatcgttggcat
catgaatatcaaaccagatattga
DBGET
integrated database retrieval system
