Phasianus colchicus (Ring-necked pheasant): 116226239
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Entry
116226239 CDS
T07365
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcoc03037
]
116226239 (RTTN)
Cilium and associated proteins [BR:
pcoc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116226239 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF383
Motif
Other DBs
NCBI-GeneID:
116226239
NCBI-ProteinID:
XP_031444883
Ensembl:
ENSPCLG00000002541
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MVLYYLQSLLSLLNLAFGGDGRHQLALQAVSCLQQLCIFLRGRLNFHRDPGFFSTEQGTT
SQNSSISYCEEARGAPRSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAASSSGNSTQAN
ADSRISLHSPLDAGRTDLPDIENEDTLELQMKQFSLSQFCVSILENAIPLLRTGSRRMTM
EVLELLVEDLYLIGDAISENVWEDESLFGLELKDKLLLVLGLLGETILYHKTNISAEQPE
VMMVHHRMAFVSISLFTVRLLQTLLPVEKASKVLQKSLLSALFLLSLDVPFSLEYPSIHE
AIAAYLEQMSSENYSIYKQASEAANSIECTCTFMIEVRKKGEKNLTELLELADQALHSLP
YHQHLTLLQESIHICSNISKSAQADPLLHAGSQNVLLRLLAHPLLNIKAEAYRCCLEVVK
DCLDIHNVAESVSSICHGIHFLLHPKVLYEIATFGLQEEKNEVNSSAKAILMHLLQGQLV
MTTLTWNKFLEALYPIIPVLQGYADTKDELGNCILTLSETSSDKGDGILPTATRLRAALR
LLFSKKHLVRSMALKHLLFHLLNEEGASLKRPCLHGSMFTSISNLFIIEGAIELKLGDKM
ESIFKVEIIEKLYDILTSDAVDIVLRKSAAEQLAIILQDTNMHGIVKRLGVVEKVLAYLS
ECVHVNGKVMESIVLPCLILLRKLIYADPDVRLSLAQQSSLLLSLFRVSLIFQNDQAVLT
EATVLLCLLLFDEVSRTDTWTESINNNGTVLPSFSLPVAVVRRFLDTLKLSSEDILILKI
THTTYGLQDCLNSIIQAVSHRDVKASLIRLSFYALNDRLALKCISGSCHTILKRIVWQRA
INRFLQVLPASAEDEKLLVDVLRFLNKLCREQRASLEADHIKWILKSLLKNKSNSLLDLL
VRSESQVRDETDEIQTAVRQQLDKELIHLFNTLLFCSMSVTDREGLELAGCFRTELALKL
LQCLRLTDAPHFYGLPSLGRTLRGMVHVTALPNWSTYSAIAEPVTICKKYLTGLLEVISS
FYVEWGGNAMSFMGKGVTKSTVLCLLHLSHEMMAQAKDTDWVSLWSLPYNNSEDQVPSHL
GLTWLVPLWVDRDPEVRFTALGIGSALTSLEIGCIALAESCQNISGGLWGTALNIFLDQS
ECSMVRREAAFILQNLLVIPIPTEGLKDCVWQGPCVHDEETGLSQTGKPALKALLHHCQF
YEHLNQMVKHCYLGCYMFDVNSSKEDNHVIEKSNSTDFDDSLNLWKVLCSQSPSSHSQST
SETMILSASPAPGNVTELQATVPANSTGFIPETAINRLMAQGQSDTTTTASPSQHDSPMS
AAMSKQCAVVTPALLSAVCSLLHNLLIVAPTDTEIALQRDLLTALSSLVSANLVERYILE
LKAPLGNPCHTEHVKAQVLLLLQYLSSVSRLLKSCLLVDSQLVIQELLKPLLRNAFTILS
IRSKDGLDSELISVLHETWVDFFNLLTTLMWNSSQIVFPFVATALASHCTAVIDTICDCI
HLSTTHPALYTASLQFLSVLLNEEGRRQLQDKQSICQDPTLSFLLDHSEECQASVIQLTE
LIIQVCERKSSKDVLKDVAANALLSLLAVSKNVQKYALEVGLIGSYIEQMKHIHAQLNLD
SLKPGKAQKKKEDSLKKQLRCAMQLLRNCLFQNEECKMAALKAHLVPVLHLLWPWLLIDD
SSMEIALRLLCVYTAYYPPGCASLCWTSGQSSLVSVRSAAGSSLMHNILKLASQVPDDNS
PLQHVIFDLLSNLALSHDCKGIIHKSNFLQNFLSLSLPKGSHKNPSNMCTLWLKLLLNIS
FGEDGQQMIMKINGFLDQIVEMCKCKHKSSQHIALLILHNICFSPTNKPKILANDKAIAV
LTTCLESDSCVVQRIGAASLWALLHNYQKAKVTLKNPSIRRKIDEAYSLVKSTPQPEGNE
LNAYYSKCLENVVQLLDC
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtattatttgcagagccttttatctctactaaacctagcttttggaggagat
ggaagacatcaattagctttacaggctgtatcgtgtctgcaacagctgtgcatcttccta
agaggcagacttaacttccacagagatccagggtttttttccactgagcagggtacaact
tcccagaattcttctatatcttactgtgaagaagcaagaggtgctcctcgttctcagaat
ccgtcacctggaagtagtagtcctcggccgtctgtgattggacggacagttcagcgtcct
agaggagatggtcaagattgggatgcagcatcttctagtggaaacagtactcaagcaaat
gcggactcgagaatatctctgcattctccacttgacgcaggacgtactgacctaccagat
attgaaaatgaggacactttggaattacagatgaagcagtttagcctttctcagttctgt
gtttccatcttggaaaatgctatacctcttctaagaacaggcagcaggaggatgacaatg
gaagttcttgagttgcttgttgaagacctgtaccttattggtgatgctatttctgagaat
gtttgggaagatgagagcctttttggattggaactgaaagacaaattgcttctggtcttg
ggcttgcttggagaaactatactatatcacaaaaccaatataagtgcagagcagcctgag
gtgatgatggtgcatcacagaatggcatttgttagcatttcgcttttcacagttagattg
ctgcaaacacttcttcctgtggaaaaggcaagcaaagttttgcaaaagagcttgctgagt
gctttgttccttctgtcactggacgtgcccttttccttggaatatccaagcattcatgaa
gccattgcagcctatttggagcagatgagttctgagaactacagcatttataaacaagct
tcagaagctgctaattcgattgaatgtacttgtacctttatgattgaagttcgtaagaag
ggggagaaaaatctgactgagttactagaattagcagatcaggccttacatagcctaccc
taccatcaacacttgaccttgcttcaggagagtattcacatatgttctaatatttccaag
tctgcccaggctgacccattgctccatgctgggagtcagaatgtgcttctccggctattg
gctcatcctttgttgaatataaaagctgaagcttatcgctgctgtctggaagtggttaag
gactgtttagatattcataatgttgctgaatctgtgtcttcaatctgccatggaatacat
tttcttcttcatccgaaagttttatatgaaattgctacgtttggacttcaggaggaaaaa
aatgaggtaaactcctcagccaaggccattctgatgcatctattgcagggccagttagta
atgacgacattgacttggaacaagtttcttgaggctctctatcccatcattcctgtttta
cagggttatgctgacacaaaggatgagctaggtaactgcatcctcactttgagtgaaaca
tcttctgacaaaggagatggtattctccctacagctaccagactacgagctgctctgcgt
cttctcttctcaaaaaagcacttggttcgttctatggcacttaaacatttattattccat
cttttgaatgaagaaggagcaagcttgaaacgtccatgtctgcatggcagtatgtttacg
agtatatcaaacttatttattatagaaggagctattgagctgaaattgggtgataaaatg
gagtctatatttaaggtggaaataattgaaaagctttacgacatcttgacttctgatgct
gttgacatagttttacgaaagtctgcagctgagcagctggccatcattttacaagatacc
aacatgcatggcattgtgaaaaggttgggtgtggtagaaaaggttttggcttatcttagt
gaatgtgtacatgtgaatggcaaggttatggaatccatagtgttaccttgtctgatactc
ttacggaaactcatttatgctgatccagatgttcgtttatctctagcacaacaatcatct
ttgttgctttcactattcagagtttccctgatattccaaaatgaccaagctgttttaacg
gaagctacagtattgctttgtcttctgctgtttgatgaagtatcaagaacagacacgtgg
actgagagcataaacaataatggtactgtcctaccttccttcagtttacctgttgctgtt
gttagacgatttttagacacactaaaactctcctcagaagacatccttatactgaaaata
actcacacaacctatggactgcaggactgtcttaattcaatcattcaggcagtatcccac
agggatgttaaagcttctctcattaggctcagcttttatgctctgaatgacagacttgct
ttaaaatgcatctctgggtcttgtcacaccattttgaagaggattgtttggcaaagagca
ataaatagatttttgcaagtgcttccagcttctgctgaggatgagaagcttttggtagat
gtcctaagatttttgaacaaattgtgtagagagcagagagcaagcttggaggcagatcat
ataaagtggatcttgaaatcattgcttaaaaataaatcaaattctcttttggaccttttg
gtgcgatcagaatcccaagtgcgggatgaaacagatgaaatacagactgctgtcagacaa
caactggataaagaactcattcatctttttaacacactgttattttgttcaatgtcagtg
actgacagagagggcttggaacttgctggctgtttcagaactgagctggctctcaagctg
ctacagtgcttaaggctaacagatgcaccacatttttatggacttccttcactggggaga
acactgagaggaatggttcatgttactgcacttccaaactggagtacatattctgctatt
gctgaacctgtcacaatttgtaagaaatatttaacaggtcttcttgaggtcatttcatca
ttttatgttgaatggggaggaaacgctatgtccttcatgggaaaaggtgtcacaaaaagc
actgttctttgtttgcttcacttatctcatgaaatgatggctcaagcgaaggatacggac
tgggtatctctttggtctttgccttacaataacagtgaagatcaagttccttcccatcta
ggtctgacatggctggttcctttatgggtagatagagatcctgaggtcagatttactgcg
cttggaataggatcagctcttacatctcttgaaataggttgtattgctttagcagagagt
tgccagaacatttcaggagggttatggggaacagcgttaaacatctttctagaccaatct
gaatgcagcatggtacgcagggaggctgcttttattctacaaaatctccttgtgatccca
attcctactgaaggtctaaaagactgtgtttggcagggaccttgtgtacatgatgaagaa
actggtctctcccagactggaaaacctgcactcaaggctcttttgcatcactgtcagttt
tatgaacatttgaatcagatggtgaaacactgttacctaggttgttatatgtttgatgtg
aattcttccaaggaagacaaccacgtcattgaaaaaagtaattcaactgattttgatgat
tctcttaatctttggaaggttctatgcagtcaaagcccatcgtcacattctcagtcaaca
tcagaaactatgattctgtctgcatcaccagcaccagggaatgttactgagcttcaggca
acagtcccagcaaattcaactggtttcattcctgaaactgcaattaatcggcttatggca
caaggtcaaagtgatactaccacaacagcatctccaagtcaacatgattctcctatgtct
gctgcaatgtctaaacagtgcgctgtagtcacacctgcacttttgtcagctgtttgcagc
cttctgcacaatctgctgattgttgcacctacagatactgaaattgcccttcaacgagac
ttgctaacagctctcagcagtcttgtaagtgctaatctggttgagagatatatcttggaa
ctgaaagctccattgggtaatccatgtcatacagaacatgtaaaagctcaggtattgttg
ttacttcaatacttatcatctgtgtccaggcttctgaagtcatgtttactggtggactct
cagcttgtaattcaggaactgttgaaacctctcttaagaaatgccttcacaattctctcc
attcgctctaaagatggactagattctgagttaatatctgtacttcatgaaacctgggta
gatttcttcaaccttctaactacattaatgtggaacagtagccaaatagtttttccattt
gtggcgacagctcttgcaagtcattgtacagcagtaattgatacaatttgtgattgtatt
catctgtcaaccactcatccagctttatatacagctagtttacagttcctttctgtcctt
ttgaatgaagaaggaagaagacaactgcaagataaacagagcatatgtcaagatccaact
cttagctttcttttagatcactctgaagaatgtcaggcatcagtgattcaacttactgaa
ttaattattcaggtctgtgaaaggaaatcttcaaaggatgtgctgaaagatgttgctgca
aatgcactgctctctctattagctgtcagtaaaaatgtccagaaatatgcactggaagtt
ggtctgataggtagctatatagaacagatgaagcacattcatgcgcagctgaatttggat
tctctaaagcctgggaaagcacagaaaaaaaaggaggatagccttaaaaagcagttaaga
tgtgctatgcagcttcttagaaactgcctctttcaaaatgaagaatgcaagatggcagca
ctcaaagctcatcttgttcctgttctgcatttgctgtggccatggcttttaatagatgac
tcctcaatggaaatagctctgcgtttgctttgtgtctacactgcatactaccctccaggt
tgtgcttcactttgttggaccagtggacaatcatcacttgtgtctgtacgaagtgcagct
ggcagttcattaatgcataacatcttgaaattggcttcccaagtacccgatgataacagc
ccacttcagcacgtgatctttgatcttctttctaaccttgctctgtctcatgactgcaaa
ggaattattcataaaagtaatttcctgcagaactttttgtctctttcattaccaaaagga
agtcataaaaatcctagcaatatgtgtactctttggctaaagctgctactgaacatatct
tttggagaagatggacagcaaatgattatgaagataaatgggttcttagaccagatagtg
gaaatgtgtaaatgcaaacacaagagcagccaacatatagcactacttattctacataac
atatgttttagtccaacaaataagcctaaaatactagctaatgataaagctattgcagtg
ctaactacctgtttggaaagtgatagttgtgttgttcagagaattggagcagcttcactt
tgggcattgcttcacaactatcagaaggcaaaagtgactttgaagaatccatcaataagg
agaaaaatagatgaagcatattctttagtgaaaagtactccacagccagagggaaatgag
ctaaatgcctattactcaaaatgcttagagaatgtagtgcagcttcttgattgttaa
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integrated database retrieval system
