Phasianus colchicus (Ring-necked pheasant): 116226380
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Entry
116226380 CDS
T07365
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116226380 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116226380 (DROSHA)
03009 Ribosome biogenesis [BR:
pcoc03009
]
116226380 (DROSHA)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116226380 (DROSHA)
Enzymes [BR:
pcoc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
116226380 (DROSHA)
Messenger RNA biogenesis [BR:
pcoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
116226380 (DROSHA)
Ribosome biogenesis [BR:
pcoc03009
]
Eukaryotic type
90S particles
RNase
116226380 (DROSHA)
Prokaryotic type
rRNA processing factors
116226380 (DROSHA)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
116226380 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
116226380
NCBI-ProteinID:
XP_031445105
Ensembl:
ENSPCLG00000003790
UniProt:
A0A669PRP8
LinkDB
All DBs
Position
Unknown
AA seq
1333 aa
AA seq
DB search
MSFHSGRGCPRGQGGPGARTSAQTYRPQNLRQLHPQQPSVQYQYDQQAAPPATYSNPSAT
SYMPPRPDFVPYPPPVPPSTQNPINQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPAPSN
APVPATPTGQSTFPYMMPPPAVPHPPPPPVIPQQVNYQPVYSTGYSQQSFPPPNFNSYQH
NSGSFQSSTTNSSSSSSHFRQYQGEKSQSDRRSPERSKHYDEHRHREHSHIHGDRHRSNN
HGDRRDRGRSPDRRRQESSRHRTEYDRGRMSPHHRSYERSRERERDRHRHRDSRRSPSPD
RSYKKDYKRTGSRSPSRERKRPRWEEERERWSESQSGNKEKNYTSIKDKESEENASEKNE
DEDDELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFEEELGKRQAKAKA
ARPPWEPPKTKLDEDLESSSESECDSDDDSSCASSSDSEVFDVIAEIKRKKAHPDRLHEE
LWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITVSPP
TNFLTDRPTVIEYDDHEYIFEGFSMFSHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFC
VKGLELFSSYLFKDILELYDWNLKGPSLENDSVSCPRFHFMPRFVRFLPDGGKEVLSMHQ
ILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQ
FNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLSQR
EEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDK
LIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKG
INTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLATYRT
AIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAK
QLFGRLLFNDKDLRDVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFTHV
RLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSL
VNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFM
NVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVA
VYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREH
QERETDETEEARK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctggacgaggatgtccccgtgggcaggggggaccaggagcaagaaca
tcagcacagacttatcgtcctcagaacctgcggcagcttcacccccagcagccctctgta
cagtaccagtatgaccagcaagccgcacctccagctacctattcaaacccttcagccacc
agttacatgcctcccaggccagactttgttccatatcccccaccggttcccccttccaca
caaaatcccatcaaccagtgtcccatgaggccaccatttccaaaccatcagatgaggcag
agcttcccagtgcctccatgcttccctcctgctcctccaccagtgccagcccctagcaat
gctcctgtgccagcaactcctaccggacagagcacttttccgtacatgatgcctcctcct
gcagtaccccatcctcccccaccaccagtcataccacagcaagtcaactaccagcctgtg
tattccacagggtattcccaacagtcattcccaccacctaacttcaatagctatcagcac
aactctggctccttccagagcagcactaccaatagcagcagcagcagcagccattttcgt
cagtaccagggagaaaaatcacaaagtgatcgacgatctccagagaggagcaagcactat
gatgagcaccggcatcgtgagcacagtcacatccacggtgacaggcatcggtccaataac
cacggggatcgtcgggatcgaggccgcagtccggataggaggaggcaggaaagcagtcgg
caccggacagagtatgacagaggaagaatgtcacctcatcatagaagttatgagcgtagc
agggagcgcgagagggacaggcataggcaccgtgacagcagaagatcaccatcaccagac
aggtcctacaaaaaagattataaaagaacaggaagccgctctccaagcagagaaaggaag
agacctcgttgggaggaagaaagagaaaggtggtctgagagccagagtggcaacaaagaa
aaaaattacactagtatcaaggacaaagagtcagaggagaatgcatctgaaaaaaatgaa
gatgaagatgatgaattacttaaaccagtctgggttcgctgtacccattctgaaagctat
tattcaaatgaccctatggatcaagtgggggactctactgtggtaggcacaagcaagctc
cgagatctgtatgaaaagtttgaggaggagctaggaaaacgacaggcgaaagccaaagca
gccaggccgccatgggagccaccgaagaccaagctggatgaagatcttgagagctccagt
gaatcagaatgcgactctgatgatgacagcagctgtgctagcagttcggattcagaagtt
tttgatgtcattgcagaaattaagcgtaaaaaagcacaccctgatcgtcttcacgaggaa
ctgtggtacaatgatccaggacagatgaatgatggaccgctgtgcaagtgcagcgctaaa
gctcgacgaacagggataagacacggcatttatcctggtgaggagcccattaaaccatgt
cgccccatgaccaacaatgctggaagactgtaccactatcgaattacggtgtcacctccc
acaaacttcttaacagacagacctactgttattgagtatgatgaccatgaatatatcttt
gaaggattctccatgttttcacatgccccactaacaaacattcctctatgtaaagtaatc
agatttaacattgactatacaattcatttcattgaagagatgatgcctgagaatttttgt
gtgaaaggtcttgagctgttctcttcttacctattcaaagatattctggaactgtacgac
tggaatcttaaaggtccttcacttgaaaatgattctgtttcctgccccagatttcacttc
atgccacgattcgtgagatttcttccagatggagggaaggaagtattgtcgatgcatcag
attcttctctacttgttacgatgcaataaagctttggtgcctgaagaagagattgccaac
atgcttcagtgggaagagctggaatggcagaaatatgcagaggaatgcaaagggatgatc
gttaccagccctggcatgaaacccagctcagttcgtattgatcaactggaccgtgaacaa
ttcaatcctgatgtaattactttccccattattgtccactttgggatacgacctgctcaa
ctcagctatgctggagatcctcaataccaaaaactgtggaagagttatgtgaaactgcgt
cacctgctagctaacagtcccaaagtcaaacaagctgataaacagaaattatcacagaga
gaggaagcactgcagaaaatccggcagaagaacacaatgagacgtgaagtgactgtcgag
ttgagtagccagggattctggaaaacagggatacgctctgatgtctgccagcacgcaatg
atgcttcctgtcctcacccaccatattcgctaccatcagtgtctgatgcatttggacaag
ttgataggctacacttttcgagataggtgcttgctgcagcttgccatgactcatccaagt
catcacttaaactttggaatgaatccagaccatgctagaaattccttatccaactgtggg
attcgacagccaaagtatggagacagaaaagttcaccatatgcatatgagaaaaaaagga
ataaacaccctgataaatattatgtcccgtttgggacaggatgatccagctccttccagg
attaaccacaatgagcgtttagaatttctgggagatgctgtggtggagttcttaacaagt
gtccacttgtactacctgtttcccactctggaggaaggaggattagctacgtaccgcact
gccatagttcagaaccaacatctggccatgttggctaagaagctggaactggatcgattt
atgctttatgctcatggtccagacctttgcagggaatcggatctccgccatgccatggcc
aactgctttgaagccctaataggagcagtttatctggagggtagtcttgaagaagccaaa
caattatttggacgtttgctcttcaatgacaaggacctgcgggatgtatggcttaattat
ccactacacccactccaactgcaggagtctaatactgacaggcaactcattgagacctca
ccagttcttcaaaagcttacagagtttgaggaggcaattggagtcatctttactcatgtt
cgacttctagctcgtgcgttcactctgaggacagtaggctttaaccacctgactctaggc
cacaatcagaggatggaattcctgggtgactccataatgcagttggtagccacagagtat
ttattcatacatttccccgatcatcatgaagggcacttaacgttgttgagaagctctttg
gtgaacaacaggacgcaggccaaagtggcagaagagctgggaatgcaagagtttgccatc
actaatgacaagacaaaaagacccgtagctcttcgaactaaaactctggctgatctcttg
gaatcctttattgctgccctatacattgataaagatttggaatatgttcatactttcatg
aatgtatgtttttttccacgactaaaggaattcattttaaatcaagattggaatgaccct
aaatctcagcttcagcagtgctgcttgactctcaggacagaaggaaaggaaccagacatt
cctctttacaagactctacagacagtgggaccatctcatgccaggacatacacagtagct
gtttatttcaaaggggaaagaataggatgtggtaaaggcccaagtattcaacaagcagaa
atgggagctgcaatggatgcacttgaaaaatataactttccccagatggcccatcagaaa
cggttcattgaacggaaatacagacaagagttgaaagaaatgaggtgggaaagagagcat
caagagagagagacagatgagactgaagaagcaaggaaataa
DBGET
integrated database retrieval system
