Phasianus colchicus (Ring-necked pheasant): 116226783
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Entry
116226783 CDS
T07365
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116226783 (PARPBP)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116226783 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
116226783 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
116226783
NCBI-ProteinID:
XP_031445599
Ensembl:
ENSPCLG00000003076
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MISFQEKILNLIKYFRRQWPLFSNSERTTVCGADCMLTALQLSMAEVNKQHHGDFSVSLS
DVMETWKYLLHDKLGLSYENMEEPENYADFKKAYHTFLASSNMLDIIDIYQKCCALALVS
EDESIAPDQLLQFISGGMNVSGSNGSVLPSTPVYKQDQNSVKVMLFAKKCFYSYLSLLVN
SKDDLALARILNVPDRGLGREAFTKLKHASQERKMSIFLMATSFIRTVEHGGKGCAASLF
DPLRVHVKGLSNFINFIDKLGEIVGEIPDPRVAGGQILSTVKMHLMKGRSNGDPFYQAVE
EVVQDLDLRIKNIIDSQHEVLTASTTGVSPTRPKLHSINHGTAYCGRDTIKVLLVLLDEE
AVSTPTQNKAELLYDDVNLIMFGSTSILTLFRSPAQSKESSPKPLRQRIQKSVDAKISKM
EQSSIKSQFACTYKNELSKIRDQHFLSSSKMPACIHPAPKQCLQGKYFTEGMNSCLDIPV
PGTISENDHQTRNYREMGKLSCQPRNKNSKNEQMDLNNDKVIYDEESETSLPKNAKKRKT
SNNPQKELDSKIDGKRKNNRTASKNKLIVGQAKLTQFFRL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttccaggaaaagattttaaacttaatcaaatatttcagaagacaatggccc
ttattttcaaactctgaaaggactacagtatgtggagccgactgcatgctgacagcatta
caactgtccatggctgaagtcaataagcagcaccatggagatttctcagtatcgctcagt
gatgtgatggaaacttggaaatatttgttacatgacaaactaggattatcatatgagaac
atggaagaacctgaaaattatgctgactttaaaaaggcctatcataccttcttagcaagc
agcaatatgttagatataatagacatatatcaaaagtgctgtgctcttgcacttgtctct
gaagatgaaagcattgcccccgatcaactattacaatttatttctggtggaatgaatgta
tcaggaagtaatggttctgttcttccttctacaccagtctacaaacaggatcagaacagt
gtgaaggtgatgctctttgccaagaagtgtttttattcatatttaagcctgttggtgaat
tctaaggatgatctggcattggctcgtattctaaatgttcctgacagaggacttggtaga
gaagccttcactaaactaaaacatgcttcgcaggagagaaaaatgtcaattttcctgatg
gcaacatcttttatccgaacagtagaacatggaggaaaaggctgtgcagcttcattattt
gatccactaagagtccacgtaaaggggctttctaacttcattaattttattgacaagctg
ggagaaattgttggtgaaatcccagatccaagagtcgcaggggggcaaattctgtcaaca
gtgaagatgcatttgatgaaaggccgaagcaatggggatcctttctatcaggcagtagag
gaagttgtacaagatttggatttgaggattaaaaatattatcgattcacaacatgaagtc
ttgactgctagcaccactggagtcagtccaacacggccaaaattgcattccataaaccat
ggcactgcatactgtggtagagacaccataaaagtcttactagttcttcttgatgaagaa
gcagtcagcactcctacccagaacaaagcggaattattatatgatgatgtaaacttaatt
atgtttggaagcacctctattttgacactcttcagatctccagcacagtccaaagaatct
tctccaaaacctcttagacagcgtattcagaaatctgtggatgcaaaaataagtaagatg
gagcaatcttcaatcaaatctcagtttgcatgtacatacaaaaatgagctgagtaaaata
agggatcagcacttcctcagcagtagcaaaatgccagcctgcatacatcctgcaccaaag
caatgtttacaaggtaaatatttcacagaaggtatgaattcatgtcttgacataccagtg
cctggaactatttctgaaaatgatcatcagactagaaattatagagaaatggggaaattg
agttgtcagccaagaaacaagaactccaagaatgaacagatggatttgaataatgacaaa
gttatctatgatgaggaaagtgaaacatctttgccaaaaaatgctaagaaacgtaagact
tcaaacaaccctcagaaggaattggacagcaaaattgatggaaaaagaaagaacaacaga
actgcaagcaagaataaattgattgttgggcaggcaaaattgactcaattttttagactg
taa
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