Phasianus colchicus (Ring-necked pheasant): 116226869
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Entry
116226869 CDS
T07365
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116226869 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116226869 (DCP1B)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116226869 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
116226869 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
116226869
NCBI-ProteinID:
XP_031445743
Ensembl:
ENSPCLG00000003642
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MAAAVAGAALLGKGLDISLAALQQHDPYISSIVDVASQVALYTFGHRANEWEKTDVEGTL
FVYTRSASPRHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEE
CQRIAELMKNLTQQEQFKAQQGTGTGVSPMVMNSANNKEVDILRMLTKAKDEYTKCKTCS
EPKQITSSSAICNNPNLIKPIPVKPNENQHQRISQQSKNADPEPQHLSLTALFGKQEKTD
VTEPLNKQHQENLPVRQGVVRSLSYEEPSRHSPCAEKQLCPAIQKLMVRGTDLHPLAEFP
ENRLCENGNIHPVGETFTGLFQPVTSRGIATSHVVQDAAGTQSLLQKLQSQSGSMTKMDP
SATGSVNSTASVFSRTPAAVGAPAAQMNNMTQPPLVYFNGSLPGQTLESQTLGKEQSKLP
RQPVSLSGNQTASSGVISPQELLKKLQIVQQEQLHVSSRPTLAAKFPVVTQNTNTLKPLD
SWIEKAPGTEKQSSLFQVISPQRIPATVTPTLLMSPMVFTQPTPAAPKANESGLLAAPNQ
EPAASSANLLLPLQTPEPPVITSNSVTKMQLQETLLHLIQVKYPEFFYFNLNLYSHFDIS
TWSLKHLGI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggccggggccgccctgctgggcaaggggctggacatcagcctggcg
gcgctgcagcagcacgacccctacatcagcagcatcgtggacgtggccagccaggtggcg
ctctacaccttcgggcaccgcgccaacgagtgggagaagacagatgtggaaggaacactg
tttgtttatacaagatcagcttctccaaggcatggcttcacaattatgaacaggctgagc
atggaaaatcgaacggaaccaattactaaagaccttgatttccaactgcaggaccctttt
ctactttacagaaatgccagattgtccatatatgggatttggttttatgataaggaagaa
tgccaaagaattgcagagctcatgaaaaacctaactcagcaagagcaattcaaagcacag
cagggcacaggaacaggagtgtcccctatggtcatgaattctgctaataacaaagaagtg
gatatcttacggatgcttaccaaggccaaagatgagtacactaagtgtaagacctgttct
gagccaaaacaaataactagttcctctgcaatctgtaacaaccccaacctaatcaaacca
attccagtgaagcctaatgaaaatcaacatcaacgaatatctcagcaaagcaagaatgca
gatcctgaaccgcaacacttgtctttgacagccctgtttggaaaacaagagaaaacagat
gtcacagaaccacttaataaacagcatcaagagaaccttcctgttaggcagggtgtggta
cgttctctttcctatgaagaacctagcaggcattctccctgtgcagagaaacagctttgc
cctgctattcagaagcttatggtgcgtgggacagaccttcacccgcttgctgagtttcct
gagaaccggctctgtgaaaatggcaatatccaccctgtgggtgagactttcacaggactc
ttccagcctgtgacttctcgtggcattgctacatctcatgtagttcaggatgctgctggt
actcagagtttgttacagaaattacagagtcagtcagggtcgatgactaaaatggatccc
agtgcaacaggatctgtgaactcaacagcttctgtgttcagcaggactcctgctgctgtt
ggagcgccagcagcacagatgaataatatgacccagccacctttggtatatttcaatggt
tccctgccaggtcagactttagagtctcagacgcttggtaaagaacagtccaaacttcct
agacagccagtttctctctctggcaatcagacagccagttctggggtgatatcacctcag
gagttgttgaagaagctccagatagtgcaacaagaacagttgcacgtatccagcagacca
accttggcagctaagtttcctgttgttactcagaacaccaacaccttgaaaccactggat
tcctggatagaaaaggcaccgggtacggaaaagcagagctctctctttcaggtaatctca
cctcagcgcattcctgccactgtgactcctaccttattgatgtccccaatggtgttcact
cagcccacacctgctgcaccaaaggccaatgaaagtgggctgttagcagcaccaaaccaa
gaacctgctgccagttctgctaaccttctcctaccactgcaaaccccagagccacctgtg
atcaccagcaactcagtgacaaagatgcagctgcaggaaacacttctacacctgatccag
gtaaagtacccagagttcttctacttcaatttaaacctttattcccactttgatataagc
acctggtcacttaagcacctgggcatctaa
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