Phasianus colchicus (Ring-necked pheasant): 116227115
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Entry
116227115 CDS
T07365
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116227115 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116227115 (TAF4)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116227115 (TAF4)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116227115 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
116227115 (TAF4)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116227115 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
116227115
NCBI-ProteinID:
XP_031446107
Ensembl:
ENSPCLG00000000514
UniProt:
A0A669P135
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSGGSGSSSPSPSPGGVVVGGSANAQTESGGGGGKMGLSAPEITKAGAGGVQGGVINHNT
RSQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHTGSAAFSGTPVTANPASAPAVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGSGGSTVTLVRPPIHTAGPTVAAAGAA
TQNGSNTVINSTISVGSFPAVATATVGSGVSLQTTLVNSQSGSSVPAAPTTQVIKSESPK
TIVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLTNVAPNPGGIPPAAPGTPTGMAKGT
ANTVAQTLPRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQ
LLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTSAPPVQISTVQAPGTSIIARQVTPTT
IIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTAT
STAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEAEDFTSRLY
RELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSPSVQR
AAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQPQKAGTLIRPPQVTLTQTP
MVALRQPHSRIMLTTPQQIQLNQLQTVPVVKPTVLPGNKAIATVSTQVAAAQKNKLKEPG
GGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFSAPLQRRILE
IGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRAQL
KFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDA
NLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRDLI
FCLENERETSHSLLLYKAFLK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctagagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgcgggccgctggggggctgctggggaaccatgtt
gtgagcggcggcagcggcagcagcagccctagccccagccctggaggagttgtagtagga
ggcagcgcgaatgcccaaacggagagcggcggcggcggcggcaagatgggactgagcgcc
ccggagatcacaaaagcaggagcaggaggagtgcaaggaggtgttattaatcataacacc
aggtcccagacttcagctctggatggagccaccacgacgagcaccagcaccaccactgca
gcggcaggaggatccgaagtcactgctgctccagggaccctcagtcagggcaaatcggtg
gttatcagcaccatggcgactgccttgtccaccaggaatggcaagattgggaccacgaca
gtgcaaactttgaatggtagtaatgtggtgatgaactctcaccacacaggaagtgctgct
ttctctgggactccagtgaccgccaaccctgcttctgcacctgctgttgcccctcttgtt
aacaatggacctggatctgtgggaaaaggaaataccgttaacgccgttttgccgtctgct
tccaacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcttcctcc
tcgcccacagttatctcttcacagccaccaccgagcgttggaagtgggggctctacggtc
acactcgtgaggcccccgattcacacagcaggacccacagtagccgcagctggcgcggcc
actcagaatgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgct
gttgctacagccactgtgggatctggagtttccctccaaacaacacttgtgaatagccag
tctggttccagcgtgccagcggctcctaccacacaggtcatcaaatctgagtctcctaaa
actatagtgcaggcagtatcccaacagcagacgctggctactgctggccagcccagtact
acagggggtaacatgattattgggcaaactatgcaagctgggctcaccaatgttgccccc
aatcctggtgggatacctcctgcagcacctggcacccctacgggaatggctaaaggcact
gccaacacggtggcacaaactctaccgaggactccaacagcaactacaagtggaatcaga
gcaactttgactcctacagttttagcacctcgtttgcctcagccacctcagaatcccact
aacattcagaattttcagttaccaccaggcatggtcctcgtgcgtagtgagaatgggcag
ttgctgatgatccctcaacaagccttggcgcagatgcaagcacaggcacatgcccagtct
cagcctcaaaatactatgactcctcgtcctgctacacctaccagtgctcctccagtgcag
atatcaacagtgcaggctccaggaacatctattattgcacgacaggtgacaccaactact
atcatcaagcaagtgtctcaggctcaaacgacagtgcaacccacaacaacgttacagcgt
cctcctgttgtgcagcctcagattgttctgggtggtactgcacaaacaactacattgggg
acagcaacagctgtacaaactggaactcctcagagaacagtgcaaggaacaacagcaacc
tccactgctgccacagaaactatggaaaatgtgaagaaatgtaaaaactttctatccacg
ttaataaaactggcatcatctggaaaacagtcttcagagaccgcagctaatgtgaaagaa
ttggtacagaacctactggatggaaaaattgaagcagaagatttcaccagtaggctctac
agagaacttaattcttcgcctcaaccttaccttgtgccttttctgaagaggagtttacct
gccttgagacagttaacaccagactctgcagctttcattcagcaaagtcaacagcagcag
ccaacaacgcaagcaacaacggcacttacagcagtgatgctaagcccttcagttcagcgc
gcagcagggaaggcaactgcaactgtaacaagtactctacaacaacctgtaatcagccta
actcagcctacacaagttggtgttagtaaacaagggcagtcgacaccactggttattcaa
cagcctcagaaagcagggacgttgataaggcccccacaggtaacgttgacacagacacca
atggtagcactgcggcaaccgcacagtcgtattatgctcactactcctcagcaaattcaa
ctgaatcaacttcagacagtacctgtggtaaaaccaacagtattacctggaaacaaagct
atagccactgtttcaacacaagtagctgctgctcagaagaataaactgaaagaacctggg
ggaggttcttttagggatgatgatgacattaatgatgttgcatcaatggctggagtcaac
ctgtcagaggaaagtgctcggatattggcaacaaactcggagctggtgggcacgttaaca
aggtcttgtaaagacgaaaccttcctcttctcggcacctttacaaagaaggatattagaa
ataggtaaaaaacatggaataacagaaatccatcctgacgtagttagctatgtatcacac
gctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcagcaaagg
aatatttcttataaggatgatgaaagatacgaacaagcaagtgacgttcgggcacagctc
aagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaaagggaa
attttaatgcgtgcagcaaagtctcgatctaggcaagaagatccagaacagcttaggctg
aaacagaaggccaaggagatgcagcaacaagagctagcacagatgagacagagggatgcc
aacttgactgcattagctgcaattggtccaagaaagaaaaggaaagtggattcaccagga
tctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctctggagtt
ggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggacctcata
ttttgtttagaaaatgagcgagagacaagccattcactattgctatataaagcattcctt
aagtaa
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integrated database retrieval system
