Phasianus colchicus (Ring-necked pheasant): 116227199
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Entry
116227199 CDS
T07365
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116227199 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116227199 (EXOSC7)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116227199 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116227199 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116227199
NCBI-ProteinID:
XP_031446212
Ensembl:
ENSPCLG00000004340
UniProt:
A0A669PTZ5
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVVLSEAEKLYIIHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPDEGYLEFFVDCSANATPEFEGRGGEELGTEIASTLYRIFSSEGSVD
LKSLCINPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPKVRVLEDEEGSKEI
ELSDDPYDCIRLNVDDVPCIVTLNKIGYRHVVDATLQEEACCLASLLIAITSKGALTCMK
KIGKGSLDPESIFEMMETGKKVGKSLHASLQKVLDEEESLGTTRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagtgaggcggagaagttgtacatcatacacggcgtccaggag
gacctccgtgtggatggccgtggctgtgaagattacagatgtgcggaagtggaaactgat
gtggtgtccaacacaagtggatctgcgagagtgaagttgggacacactgatatcttggtt
ggtgtaaaagctgagatggggacaccaaagttggagaaaccagatgaaggttatctggaa
ttctttgttgactgttctgcaaatgctactcctgaatttgaaggccggggaggagaagaa
cttggcacagagatagcaagtactctctacagaatatttagcagtgaggggagcgtagac
ttgaaatctctttgcattaatcccagggaacactgctgggttctctacgttgatgtattg
ttactggaatgtggtgggaacctctttgatgcaatctctatcgcggtgaaggcagctctc
tttaacacaagaatacccaaagtgcgtgttctggaggatgaagaaggctctaaagaaatt
gagctctctgatgacccttatgattgtattcgacttaatgtggatgatgtgccctgcatt
gtcacactaaacaaaattggatatagacatgtggtggatgctacccttcaggaagaagcc
tgttgtttggccagcctgcttattgctataaccagtaaaggtgccctcacttgtatgaag
aaaatagggaaaggtagccttgatcctgagagcatttttgaaatgatggagactggaaag
aaagtaggaaagtcattgcatgcatcacttcagaaggttttggatgaagaagagagtttg
gggaccacacgtcagaaagttggatttctaggatga
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integrated database retrieval system
