Phasianus colchicus (Ring-necked pheasant): 116227341
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Entry
116227341 CDS
T07365
Symbol
XRCC5
Name
(RefSeq) LOW QUALITY PROTEIN: X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116227341 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcoc03400
]
116227341 (XRCC5)
DNA repair and recombination proteins [BR:
pcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116227341 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
DUF6005
Motif
Other DBs
NCBI-GeneID:
116227341
NCBI-ProteinID:
XP_031446438
Ensembl:
ENSPCLG00000004787
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MAPRPAPPLLFPQPRSRSPXRWVALPGLQAPAGALSAAHRGADKMARGGKSAIVLCLDVG
ITMSSSAPGEESALEQAKRVVTKFLQRQVFAESKDEVAVVLFGTDGTKNNLASRDQYQNI
TVHRSLMLPDFDLLEDIQNKIQLGSQQADFLDAIIVCMDLLQQETLGKKFEKRHIELFTD
LSSPVSEDQLEIIIANLKKTGTSLQFFLPFPVDDGDGHGDTSASIYPQLHQNSFPRKRLT
AQQKEGIDVVKKLMHTLDEEGGLEEIYTFRESLERLAMFKKIERRPVPWSCQLTIGSDLS
IRIVAYKALTEEKVKKIWTVVDAKTLRKEDVQRETVYCLNDDDETEVQKDDTIQGFRYGS
DIVPFSKEDEEQMKYKTEAKCFSVLGFSRASQIQRHCYMGNQVLKVFAAKDDENAAVAFS
ALVQALDELNVVAIVRYAYDRRCNPQIGVAFPCIKDAYECLFYVQLPYMEDVRQYMFSSL
KNNKKCSPTVDQLSAIDSLIDSMNLVYEDDDGETFEDLFKPSKIPNPHFQRLYQCLQHKA
FHPNEPLPPIEQHLLEMLEVPRMVKERCKAPLEKVKALFPLKDAGKKKEEKTAQDIFKDD
EDGPNAKRRKIEDEEDSFSIMKLAEGNVTSVGSVNPAEDFRILVRQKNADFKDVSQQLIN
RIDQFLENRSSQYYMKAINCIRAFRGEATKLSKVQCFNDFLQALKSKVEDKALVDFWEIV
VQDRISLITKDEAEGSSVTSEEAEKFLTPKEKKNETLPATDEGGDVDDLLDMM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccgccccgccccgcccctcctcttccctcagccccgttcgcgctctcctngc
cgctgggtggcgctgcccgggctccaggcgccggccggagcgctgagcgcggcgcaccgc
ggcgctgacaagatggcgcgcggcggcaagtcagccatagtgctgtgcctggacgtaggc
atcacaatgagcagttctgctcctggggaggagtctgcactggaacaagccaagagggtt
gtgaccaagtttctgcagcgacaggtttttgctgagagtaaagatgaagttgctgtagtt
ttgtttggcacagatggtactaagaataacctcgccagtagggatcaataccaaaacatc
actgtacatcggtctctaatgctgccagattttgacttgttagaagacattcaaaataag
attcagctaggctctcagcaagcagactttctggatgcaattattgtgtgtatggacttg
cttcagcaggaaacattaggaaagaaatttgagaagagacatattgaactgtttacagac
cttagtagtcctgtcagtgaggatcagctggaaattatcatcgctaacttgaagaaaaca
ggaacttcactccaattttttttgccatttccagtggatgatggtgatggacatggagat
acaagtgccagcatctacccgcagctgcaccaaaactcattcccgagaaagagattaact
gcacagcaaaaggaaggcattgatgtggtgaagaagttgatgcatactttggatgaagaa
ggagggctggaagaaatttacactttcagagagagcctggaacgtcttgcgatgtttaag
aagatagaaagaagacctgtaccttggtcatgccagttaactattggttccgatttgtct
ataaggattgtggcctacaaagcactcacagaagagaaggtgaaaaaaatctggacagtt
gtggatgctaaaaccctcagaaaagaagatgtgcagagagaaaccgtttactgtttaaat
gacgatgatgagacagaggttcagaaagatgatactattcaagggtttcgctatgggagt
gatatagttcctttttccaaagaagatgaagagcaaatgaaatacaaaactgaagcaaaa
tgtttttctgttctgggattcagcagagcatctcagatccagaggcactgttacatgggc
aaccaggttctcaaggtctttgcagcgaaagatgatgagaatgcagcagttgctttttct
gcccttgttcaagcattggatgagttgaatgtagtagctatagtgcgctatgcatatgat
agaagatgtaacccacaaattggtgtagctttcccatgcattaaggatgcatatgagtgt
ctcttctatgtgcaactaccatatatggaagatgtaagacagtacatgttttcatccttg
aaaaacaataagaaatgctctcctactgtggatcagttatctgcgattgactccttgatt
gattctatgaatttggtttatgaagatgatgatggagaaacttttgaggacctgtttaag
cctagcaaaatcccaaaccctcattttcaaaggttatatcagtgtttgcagcataaggct
tttcaccccaatgagccattgccaccaattgaacaacaccttttggaaatgctggaggtg
ccccgtatggtaaaagaaaggtgcaaggctccacttgaaaaagtaaaggcacttttccct
ctaaaagatgctggcaagaaaaaagaagagaagactgctcaagatatctttaaagatgat
gaagatggacccaatgctaagagaagaaaaattgaagacgaggaagatagctttagtatc
atgaaacttgctgaaggcaatgtcacctctgttggcagtgttaacccagcagaagacttc
cgaattctggtgaggcagaaaaatgctgacttcaaagatgtgagtcagcagctgataaac
cgcattgatcagtttctggaaaacagaagctcacaatactacatgaaagcaatcaattgt
attagagctttcagaggggaggctacgaagctatccaaggtgcagtgctttaatgatttt
ctgcaggccttgaagtcaaaggtggaagataaagccttagttgatttctgggagattgtg
gtacaagacagaatttctttgatcactaaagatgaagcagagggaagttctgtgactagt
gaagaagctgaaaagttcttgactccaaaagaaaagaaaaatgaaactctgcctgccaca
gatgaaggtggtgacgttgatgatttgctggacatgatgtga
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