Phasianus colchicus (Ring-necked pheasant): 116228060
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Entry
116228060 CDS
T07365
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116228060 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116228060 (SUPT6H)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116228060 (SUPT6H)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116228060 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
116228060
NCBI-ProteinID:
XP_031447547
Ensembl:
ENSPCLG00000003528
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWSVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDTEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQLQANTTPQSTQSQTQSQASSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcagaggagtcagaggaggagtacaaccaggatgga
gaggttgttcccagagtaaccaagaaatttgtagaggaagatgaggatgatgaggaagag
gaggaggagaatcttgatgatcaagatgagcaagggaacctgaaaggattcattaacgat
gatgatgatgaggaagaggaagaggaggaagaagccagtgactccggggactctgaggat
gatgttggccataaaaagagaaagcgcacttttgatgaccgcctggaggatgatgatttt
gacctcattgaagagaacttgggtgttaaagtcaaaaggcaaaaattcagacgtgtgcgg
aaaatgtctgatgatgaggatgatgaagaggaggactatggtaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaagatggtgaaggcgaggagggaggggaagctgtt
gaagctcctgttgcaccaccagaagaggaagaagaggaggaagaagatgaatctgacatc
gatgacttcatagtggatgatgatggacaacctctgaagaagccaaaatggagaaagaag
ctgcccggatacactgatgctgctttgcaggaagcccaggaaatttttggtgtggacttt
gactacgatgagtttgagaagtacaatgagtatgatgaggagatggaggaggaatatgaa
tatgaggatgaagaagctgaaggagagacccgtgtccgacccaagaagactgccaagaaa
cgtgtcagtcggcgtagcatctttgagatgtatgagcccagtgagctggagagcagtcac
ctaacagatcaggacaatgagatccggatgacagacatgcctgagagattccagttgcga
tccatccctgtaaaaagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaatgcatttgcaacacccaccatttccttgcaggaaagttctgactaccttgatcgt
ggacaagccagcagcagcttcagccgcaagggacccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcagcattttgaggtcccattcatcgccttctacagaaag
gagtatgtggaaccagagctgcacatcaatgacctctggagtgtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcaaaacctgacacgtctgtttgagaagatgcag
gcctaccagtatgagcagatctctgctgacccagacaagcctttggctgatggaataagg
gctcttgatactactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaa
gatgtgtataatcacttcctgctgtactatgggcgagacatccccaagatgcagaatgct
gcaaaggctgctcgaaagaagcaaaagcgtatccgagaagatggtgaagaggaggaaggt
gaaggggaggatgcagaagatgatgagcagaaagggcctgagctgaagcaggcttcccgt
cgggatatgtacaccatctgtcaaacagctgggctggatggcctggctaagaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccaacgtcacgagacagag
cagttccccgcagagcccctggagctggccaaggactatgtgtgtagtcaattcccaagc
ccagaagctgttctggaaggagcacggtacatggtagcattgcagatagccagggagcct
ttggtcaggcaggtcctgagacagactttccaagaaagggctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagccagtgaaggagctgcgagatgaccagttcctgaaaatgagcctggcagag
gaggaggcactgctgactatagacatcagcatagacatgaaaggagtggaggggtatggt
agcgaccagacatactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaggaatggaatcggcagcgtaccatggccattgagagatccctcaaccagttc
ctctatgtgcagatggctaaagagctgaagaacaagctgttggtggaggccaaggagtat
gtcctcaaggcttgcagccgcaagctgtacaactggctgaaagtagcttcataccgtcct
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaaggaattcgg
gtgctaggcattgcgttttcctcagccagggaccaccctgtgttttgtgccctcgttaat
ggagagggtgaggttacagacttcctccgactgccacatttcacaaagagaaggaatgcc
tggcgtgaggaagagagggaaaagaaggcacaggatattgaaaccttgaaaaaattcctt
ttgaacaagaagcctcacgtggtcacaattgcaggcgagaacagggatgcccagatgctg
atggaggatgtaaagaggattgttcatgaactggatcaggggcagcagctgtcctctatt
ggagtagagctggtagataatgaactggccatcctctacatgaacagcaagaaatctgag
aatgagttccgagattacccgcctttgttacgtcaagcagtttcccttgctcgtcgcatt
caggaccctctcgtagagtttgcccaggtctgcagctctgatgaggatattctttgcctg
aaactccatcctctgcaggagcatgtggtgaaggaggatctgctgaatgccctctactgt
gaattcataaaccgtgtaaacgaggtgggagtggatgtcaatcgggcaattgctcaccct
cacagccaggctttgttgcagtatgtgtgtggcctgggaccacgcaaaggcactcatctg
ctaaagatcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacgatg
tgtcacatgggacccaaggtgtttatcaactgtgcaggcttcatcaaaattgacacagcg
tcgctgggcgatagtactgattcctacattgaagtcctagatggttccagggtccatccc
gaaacctacgagtgggcaagaaaaatggcagtagatgctttagaatatgatgagtcagct
gaggatgcgaatcctgcaggagctctagaggagatcttagaaaaccctgaacgactgaag
gacctggatcttgatgcctttgctgaagaactggaaagacagggctatggtgacaagcat
ataactttatatgacattcgagctgaactaagctgcaggtacaaggacctaaggacccca
tatcgttctccaaatacagaagaggtcttcaacatgctgaccaaagaaactccagagact
ttttatattggtaaaatgatcatctgcaacgtgactgggatagcacacaggaggccacaa
ggagaaagctatgaccaggcaatacggaacgacgaaactggtctttggcagtgtcctttc
tgtcagcaggataacttcccagagctcagtgaggtttggaatcactttgacagtggttca
tgcccaggtcaggccattggagtgaagacacgtctggataatggtgttgctggcttcatc
ccaacaaaatttctaagtgataaggtggtcaaacggcctgaagaaagggtgaaggtggga
atgactgttcactgcaggattatgaagatcgacatcgagaagttcagtgcagatctgacc
tgcaggacctcagacctgatggataagaacaatgagtggaaactgcctaaagacacctac
tatgactttgataccgaggcagcagatcacaaacaggaggaagacatgaagagaaagcaa
cagcggacaacgtacatcaagagagtaattgctcacccgtcattccacaacatcagcttc
aagcaagctgaaaagatgatggagaccatggaccaaggggatgtgattattcggccaagc
agcaaaggggagaaccacctcactgtcacctggaaggtgaacgatgggatttaccagcat
gtggatgttcgagaagagggcaaggagaatgccttcagtctgggctctacactttggatt
aatacagaggagtttgaagacttggatgaaatcgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggattgcaacggtggagacaag
aagaagctggaagagctgctgataaagaccaagaaagagaagccaacgtttattccctac
tttattagtgcctgtaaagatctacctggcaaattcctcttgggttatcagcctcgaggc
aaaccaaggatagagtatgtgacagtgacaccagaaggattccgctaccggggccaggtc
ttccctacagtgaatggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattactcccagcagtagcagtcggaccagaactccagcctccattaatgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaatgctctaccacagaacatgact
tcccagatgttcagtgccattgctgctgtgacagggcaggggcagaacccaaatgccacc
cctgcacagtgggcatccagtcagtatggctacggaggcagtggaggtggcagcagcgcg
taccacgtcttcacaactccagcacagcaaccggtggccacccctctgatgacccccagt
tactcctacactacccccagccagccgatcacaacgccccagtaccagctccaggccaac
accacaccccagtccacacagtcccagacacagtcgcaggcctcatccagttccaggcag
aggcagcagccaaagaccaacagtcacgctgccatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgagcgaaggaaacagaagcagaggttgactcctcgccca
tctcccagccccatgattgagagcacacccatgtccatcgctggggacgccacaccgctg
ctggatgagatggaccgatag
DBGET
integrated database retrieval system
