Phasianus colchicus (Ring-necked pheasant): 116228087
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Entry
116228087 CDS
T07365
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116228087 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoc03041
]
116228087 (PRPF8)
Spliceosome [BR:
pcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116228087 (PRPF8)
Complex C
U5 SnRNP specific factors
116228087 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
116228087
NCBI-ProteinID:
XP_031447577
Ensembl:
ENSPCLG00000003617
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPTPMAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggctgcgcgccggtgccgaccccgatggcgccg
ctgcccgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcaacagctg
caggccaagcgctatgcggaaaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgaacacgtccggaaaatcatccgcgaccacggtgacatgaccaacaggaag
ttccgccacgacaagcgcgtctacctgggtgctctgaagtacatgcctcacgctgttctg
aagctcttggagaacatgcctatgccctgggagcaaatcagagatgttccagtcctgtat
cacatcacaggagccatctcttttgtgaatgagattccctgggttatagaaccagtgtac
attgcacagtgggggtccatgtggattatgatgaggcgagagaaaagggacagacgtcac
ttcaagaggatgagatttcccccatttgatgatgaagaacctcctctggattatgctgat
aacattctagatgtggagcctctggaagcaattcagcttgaactggatccggaggaagat
gccccagtgctggactggttctatgaccaccagccattgaaagacaatagaaagtatgtg
aatggttctacctaccagcgctggcagttcactctgcccatgatgtccacactgtatcgt
ctggccaatcagctgctcactgatcttgtggatgacaactatttctatttgtttgatctg
aaagcatttttcacttccaaggcgctgaacatggctattcctggaggtcccaagtttgag
cctcttgttagagacatcaatctgcaggatgaagactggaatgagtttaacgacatcaac
aaaattatcatcaggcagccaatcaggacagagtacaaaattgctttcccatacctgtac
aataaccttccccaccatgtccacctgacttggtatcatactccaaacgttgttttcatt
aaaacagaagatcctgatctcccagctttttacttcgatccgctgatcaaccccatttca
cacagacattctgttaagagtcaggaaccgctgcctgatgatgatgaagagtttgagtta
ccagagtttgtggaacctttcttgaaggataccccactgtacacagacaacacagccaat
ggcattgccctgctgtgggccccacggccattcaatctgaggtctggtaggactcggaga
gctcttgacatcccactggtcaagaactggtatcgtgagcactgcccagctggccagcca
gtgaaagtacgagtctcctatcagaagctgctgaaatactatgttttaaatgccctcaag
cacagaccccctaaggcccagaagaagaggtacctattccgctccttcaaggctacaaag
tttttccagtcaacgaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aactttaacctgaagccagtgaagaccctcaccactaaggaaaggaaaaaatcccgtttt
ggtaatgctttccatttgtgcagagaggttctgcggctgactaaattggtggtggacagc
cacgtccagtacagacttggaaatgtagatgcatttcagttagcagatggcttgcagtac
atctttgcccatgttggtcagctgacagggatgtacagatacaagtacaaactaatgagg
cagattcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtccaggctgtggcttctgggctccaggctggagagtgtggctgtttttc
atgaggggcatcacgccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctgagggcagctgttatgcatgacattctggacatgatgccagaaggg
atcaaacagaacaaagccagaactatcctgcagcatctgagtgaggcttggcggtgctgg
aaggccaatatcccctggaaggttcccgggctgccaactcctattgagaacatgatcctg
aggtatgtgaaggcaaaagctgactggtggacaaacacagctcactacaacagagagcgt
atccgtcggggtgccactgtggacaagactgtctgtaagaagaatctgggccggctgacc
agactctacttaaaagctgagcaggaacggcagcataattacttgaaggatgggccttac
atcaccgcagaagaggccgttgctgtgtacacaaccacagtgcactggctggaaagcagg
aggttctcacccattccattccccccattgtcctacaagcacgataccaagttgctcata
ttggccctggagaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcacag
agggaggagctgggcttgattgaacaggcttatgacaatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagccttcaaggaggttggcattgagttcatggat
ctctacagccacctggttcctgtttatgatgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataaaagaagactcttccctccttggatc
aagcctgctgacactgaacctcctccgctgctagtgtacaagtggtgccaaggcattaat
aatctgcaagatgtttgggaaacgagtgaaggtgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacgttactcaacaggctgttgcgtcttatt
gttgatcacaacattgctgactacatgacagcaaaaaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctacgggattattcgtggattgcagtttgcttccttcatt
gtccagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctggacctccccagatgcccaatgacttcctcagcttccaagacattgcaactgag
gtggcccatcccattcgccttttctgcagatacatcgaccgcattcacatcttcttcagg
tttacagcagatgaggcaagggacttgattcaacggtacctgacagagcatccagatccc
aacaacgagaacattgtaggctacaacaataagaagtgctggcctcgggatgctcggatg
cgcctcatgaagcatgatgtcaaccttggccgtgctgtattctgggatatcaagaaccgc
ctgcctcgatccgtcaccacagtgcagtgggagaacagcttcgtgtctgtttacagcaag
gataaccccaatttgctgttcaacatgtgtggttttgagtgccgcattttgcccaaatgc
cgcaccagctatgaggagttcacccacaaggatggtgtctggaacctgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctgcgcgttgacgacgagtctatgcagagattt
cacaacagagtgaggcagatcctcatggcatctggctctacaaccttcactaagattgtc
aataaatggaatacagctctgattggcttgatgacatatttccgggaagctgttgtaaat
actcaggagctgcttgacttgctggtgaagtgtgagaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgcctagccgttttccacctgtggtgttctacacccctaaa
gagctgggaggtctgggcatgctctctatgggacatgttcttatcccacagtctgacctg
aggtggtccaagcagactgatgttggcattactcatttccgctcagggatgagtcacgag
gaggaccagctcatcccaaatttgtatcgttacatccagccgtgggagagtgagttcatt
gactctcagagagtgtgggcagaatatgctctcaagcgacaagaggctatagcccagaac
aggcgtctgacactggaggatctggaggactcgtgggacagaggaattcctcgtattaac
acccttttccagaaggaccgacataccctagcttatgataaaggatggagagtcaggact
gacttcaagcagtatcaggtcctgaaacagaatccattctggtggacacatcaacgccac
gatgggaagctgtggaacctgaacaactaccgcactgatatgatccaagcactgggcgga
gtggaggggatcctggagcacactctcttcaagggcacttacttcccaacgtgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaatcagattccaaacagaagatttactctgtggtggtctcct
accattaacagagccaacgtatatgttggctttcaggtgcagctggatttgacaggtata
tttatgcatggcaagatccccacgctgaagatttctctcattcagattttccgagctcac
ttgtggcagaagatccacgagagcattgtaatggatttgtgtcaggtgtttgatcaggag
ttggatgctctagagattgagacagtgcagaaggagacaatccaccccagaaaatcatac
aagatgaattcctcatgtgcagatatccttctcttcgcttcctacaagtggaatgtgtca
cgtccgtcattgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatccagctgcgctggggcgattatgattcccatgatattgagcgctatgct
agagccaagttcctggactacactacagacaacatgagtatctatccatctcctactggc
gtgctcattgccattgatctggcctataatttacacagtgcatatgggaactggttccct
ggtagcaaacctctgatccagcaggctatggctaaaattatgaaagcaaatcctgcactg
tatgtgttgagagaacgaatccgcaagggcttgcagctgtactcatctgagcccacagaa
ccctacctttcttctcagaactatggagagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacctatcaatggagccattttcatcttcaaccctaggactggacagctcttcctgaag
atcattcacacatctgtgtgggcaggacagaagcgtctcgggcagctggccaagtggaag
actgctgaagaggtggctgccttgatccgctcgcttcctgtggaggagcagcctaagcag
atcatagtgactcgaaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctccgagttgcagctgcctttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggctactgaacctcagatggttctcttcaatctctac
gatgactggctgaaaaccatctcttcctacacggcattctcacgtctgattctgattctc
cgggcactgcatgtgaataatgatagagccaaagttattctgaaaccagacaagacaacc
ataacagagcctcaccacatctggccaactctgacagatgaggaatggatcaaggtggaa
gtgcagctgaaagatctgatccttgctgactatggcaagaagaacaatgtgaatgttgca
tccctaacacaatcagagatccgagacattattctgggcatggagatctctgccccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcaatcacagctgaca
gccacacagacccgcactgttaacaaacatggggatgaaatcatcacctccacaaccagc
aactatgaaacccagactttctcctccaagactgagtggcgagtcagagcgatttctgcc
gccaacctccacctgagaacaaaccacatttatgtttcatcagatgacataaaggaaacg
ggctatacgtacattcttcccaagaatgtgttgaagaaattcatctgcatctcagatctc
cgagcccagattgcaggttacctttatggagtgagccctcctgataatccccaagtgaag
gagatccggtgcattgtgatggtaccccagtggggaacacaccagactgtgcatctccca
gggcagctgcctcagcacgagtacctcaaggaaatggaacctctggggtggattcacacc
caaccaaatgagtccccgcagctgtcaccacaggacgtcaccacccatgccaaagtcatg
gctgacaacccctcctgggatggggagaaaactatcatcatcacctgcagttttacacca
ggttcctgcacactgacagcctacaaactgaccccaagtggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaaaggctacctgccatcccattacgagagggtgcag
atgctgctgtcagatcgattccttggcttcttcatggttccagcacagggatcctggaac
tataacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgtccttctcacttcctcaacttcgccctgctg
caggagggggaggtttactccgccgacagggaggacctctatgcctaa
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integrated database retrieval system
