Phasianus colchicus (Ring-necked pheasant): 116228089
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Entry
116228089 CDS
T07365
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116228089 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116228089 (SCARF1)
Membrane trafficking [BR:
pcoc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
116228089 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_PEAR1L
EGF_2
Motif
Other DBs
NCBI-GeneID:
116228089
NCBI-ProteinID:
XP_031447581
Ensembl:
ENSPCLG00000003620
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MDRHSPSGMARTCLLLCLQLWLWVQGSAQELDPNGRNVCKVGSPAVNLACCPGWKQEGQE
CTAALCEGEDACGPEEVCVRPGLCRCKPGFFGADCSSPCPAQYWGHDCKQRCPCHPGGMC
EAESGRCTCNPERWGELCQFRCPCGPHSRCDPTTGACRCEPGWWGPDCKRQCQCNLATSR
CDPLTGHCHCRLGWWGRKCRFKCSCNLSPCAQETGNCKCKAGFWGSACQWHCDCLHGSCN
PLNGYCSCEPGFQGRSCQEPCPAGTYGSQCVHSCGNCKHNQPCSSVDGFCLACQPGWNGT
QCKERCMPGFHGQGCLQPCPRCRQGDICDAETGSCPQCEPGWTGPSCNSSCPAGTFGDGC
QLLCPECVWGSCDPVSGDCLCQAGYWGASCNDTCPEGFFGVNCSSPCQCSRGTCHPAQGN
CILSLTDHAALAAAILIPLLLLLLCVACCCCGAGPADARDRAAVPDDDVVARMKHHVQGV
LANISAMMPCFTLNSSKLPKVTVSHHDAEIPFNPSFIESPSAVWASDSSFSSFDTDNEGP
EYSVPPREGVPLLSGAELQAEMCPPSEALPDPTAFSSEDVSQPFTIPRTSSIAKAKRPSV
SFAEGTKFSTAETPSPGRKPKALWGPSKLSLQAGDVGTEIPAEQAGSDGYESPDPLSKGD
ESHRPSPRATPGGRRRMVTSTRHVAQRVEALEAAAKRGSWDGKRKEPNVTTIYMTVGTAG
QDPKAEGGVEGPVQAVLKRLGSLQKGRWAAKEEPVVRRSMEGIQKPPRRALAQRRDSANG
CKERESVPGAPGELCPGKQQHPPGKRQSFPLESTKSTGGQDGVGEGLGAAERGKSLELAL
SVETKGQVTQEEEPKYENVSSRNEDAPTNPATT
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggacagacacagccccagcgggatggcgagaacctgcctgctgctctgcctgcagctg
tggctgtgggtgcagggctctgcccaggagctcgaccccaacggcaggaatgtctgcaag
gtgggcagccctgctgtgaacctggcgtgctgccccggctggaagcaggaagggcaggag
tgcacagccgcgctctgcgaaggggaggatgcctgcgggccagaagaagtgtgcgtgaga
cctgggctgtgccgctgcaaacccggcttctttggtgcagattgcagctccccctgccct
gcacaatactggggtcacgactgcaagcagcgctgcccgtgccaccctggtgggatgtgt
gaagcagagagcgggcgctgcacctgcaaccccgagcgctggggagagctgtgccagttc
cgctgcccctgcggaccccacagccgctgtgaccccacgactggagcctgtcgctgtgag
ccgggctggtggggtcccgactgcaagaggcagtgccagtgcaacctcgccacctcgcgc
tgcgaccctctcaccgggcactgccactgtcggctgggctggtggggaaggaaatgcagg
ttcaagtgttcctgcaacctctcaccctgcgcccaggagacgggcaattgcaaatgcaag
gctggtttttgggggtcggcgtgtcagtggcactgtgactgtttgcacggttcctgcaat
cctctcaatgggtattgcagctgtgagccaggtttccagggcaggagctgccaggagccc
tgcccagcggggacgtatgggtcccagtgcgtgcacagctgtgggaactgcaagcacaac
cagccctgctcatctgtggatggcttttgcctggcatgccagcctggctggaatgggacc
caatgcaaggaacgctgcatgcccggcttccatggccaaggctgcctccagccctgccca
cgctgccggcaaggagatatctgtgatgcagagactggttcctgcccacaatgtgagcct
ggctggacaggacccagctgtaacagctcctgccccgcagggacgtttggtgatggatgc
cagctgctgtgccccgagtgtgtctgggggagctgtgaccctgtgtcgggtgactgcctc
tgccaggctggctactggggagccagctgtaatgacacctgcccagagggcttttttgga
gtgaactgttcctccccctgccagtgctcacgaggaacctgccaccctgcacaaggcaac
tgcatattgagtctgacagaccacgcagctctggctgctgccatcctcatccctctcctc
ctgctgctgctctgtgttgcttgctgctgctgcggtgctggccctgcggatgccagagac
agggcggccgtgccggatgacgacgtggtggccaggatgaagcaccatgtgcagggcgtg
ctggccaatatcagtgctatgatgccttgcttcaccctcaacagctccaagcttcccaaa
gtcacagtttcccaccacgatgcagaaatccccttcaaccccagcttcatcgagtcgcca
tcagccgtgtgggcttcagacagctccttctcctcctttgacactgacaacgaagggcct
gagtactccgtccctcctagagaaggggtcccactgctgtcaggggctgagctgcaggct
gagatgtgcccccccagcgaggcgctccctgaccccactgccttcagctctgaggatgtc
tcgcagcccttcaccattccccgcacctccagcatcgccaaggccaagcggccctctgtc
tcctttgctgaggggacaaaattcagcacagcggagacccccagccccgggcggaagcca
aaagccctgtgggggccatccaagctgtccctgcaagcaggagacgtggggaccgagatc
cccgctgagcaggcaggcagtgatggttacgagagccctgatcccctcagcaaaggggac
gaaagccatcggccatcacctcgggccacgccggggggccgccggcggatggtgaccagc
accagacacgtggcccaaagggtggaagccctggaagcggctgcaaaaagaggcagctgg
gatgggaagaggaaggagcccaacgtcaccaccatctacatgacggtggggacggcaggg
caggaccctaaagctgaggggggtgttgagggtccggtgcaggccgtgctgaagcggctg
ggcagcttgcagaaaggaaggtgggctgccaaggaggagcccgtggtgaggaggagcatg
gagggcatccaaaaaccaccccgccgggccctggcacaacgtagggattcggcaaatggc
tgcaaggagagggagagtgtgccgggggctcccggtgagctgtgccctggaaaacagcag
catcctcctgggaagagacagtccttccctctggaatcgacaaaaagcactgggggccag
gatggggttggtgaaggcctgggtgctgcagaaaggggcaaaagccttgagctggcccta
agtgtggaaacgaagggccaggttacccaggaggaagagccgaaatatgagaacgtgagc
agcagaaatgaggatgcaccaaccaaccctgcgaccacctga
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