Phasianus colchicus (Ring-necked pheasant): 116228348
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Entry
116228348 CDS
T07365
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116228348 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116228348 (THOC5)
03041 Spliceosome [BR:
pcoc03041
]
116228348 (THOC5)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
116228348 (THOC5)
Spliceosome [BR:
pcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116228348 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
116228348
NCBI-ProteinID:
XP_031447975
Ensembl:
ENSPCLG00000005279
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSDSSKKRKPKVIRTDGGPQEGKRGKADGEQDARYYSEECEVDLRDPIKDYELYKETCQ
ELQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITL
TEPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKAL
YKPPEDSQDDESDSDMEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTIDLKCKDENVL
HLTFYYLMNLNIMTVKTKVTTAAELTTAISAGDLLSPDSLLSCLYPGDHGKKTPNPANQF
QFDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHMVTADNSLSASHMEMTMKLLR
TRLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWTAIPFEDYAELPYTKDVV
EAGLAEDTHLYYMALIERGTAKLQVAVVLNPGYSALPPIFSLCLNWKGERTGSNDDNIRA
MESEVNVCYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTTVEGPKEFPQEKMCLR
LVRGPMRLKPFKFNYPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggattccagcaagaagaggaagcccaaagtgatccgaacggatgggggaccg
caggagggcaagcggggcaaggccgatggcgagcaggatgctcggtactacagtgaggag
tgtgaggttgatctccgggaccccatcaaggactatgaactctacaaagagacgtgccag
gagcttcagagactcatggcagaaatccaggagttgaagagcagaggcgtcaaagacaat
gcctctgagatagatgagcgacgcgttcagagctgtgtgcacttcatgaccctgaagaag
ctcaatcggctggctcacattcggctgaagaagggccgagatcagacccatgaggcaaag
cagaaagttgatgcctatcacctgcagctccagaatttgctttatgaggtgatgcaccta
cagaaagagatcaccaaatgcttggagttcaaatcgaagcacgaggagatcgaactggtg
agcctggaggagttttacagtgaggctcccactgaaatcagccgacctgacatcaccctg
actgaaccccaccagcagacccttgcccgcctggactgggaactggagcagcgtaagaga
ctggcagagaggtataaggaatgccagaccatcaaggagaagatcctgaaagagattgaa
gtgaaaaaggagtatctgagcagcctccagcctcgcctcaacagcattatgcaggcctcc
ctgcctgtccaggagtacctcttcatgccttttgaccaggcacacaagcagtacgagaca
gcgcgacacctgccaccgcccctctacgttctttttgttcaagccagtgcctatggtcag
gcctgtgataagaagcttgttgtggccattgaaggcagtgtagaggaagccaaagccttg
tacaagccacctgaggactcgcaggatgatgagagcgattctgacatggaggaggagcag
accacgaagcgacgcaggcccaccctgggtgtgcagctggatgacaaacgcaaggagatg
ctgaagaggcacccgctgtctgtcaccattgacctgaagtgcaaagatgagaatgtgctt
cacctgaccttctactacttgatgaacctcaacatcatgacagtgaagaccaaggtgaca
actgctgctgagctgacaactgccatcagtgctggcgacttgctctccccagactccctc
ctgagctgcctgtacccgggagaccatggaaagaaaacccccaatccagccaaccagttc
cagtttgacaaagtgggcatcctgaccttgagtgattatgtgacagagctggggcatccc
tatgtgtgggtgcagaagctgggcggcctgcatttccccaaggatcagcctcagcatatg
gtcactgcagacaactctctgagtgcgagccacatggagatgaccatgaagctgctgagg
acgaggctgcaatcccgcctggctctccacaaacagtttgcttctcttgagcatggcgtg
gtgccagtgtccagcgagtgccagcatctcttccctaccaagatcgtctcacgcctggtg
aagtggactgccatccccttcgaagattacgcggaactgccctacactaaagacgtggtg
gaggctgggctggctgaagacacccacctctattacatggccctgatagagaggggaacg
gccaagctccaggttgctgtggtcctgaatcccggttactctgcgctgccacccatcttc
agcctctgcctgaactggaaaggagagcgaaccggcagcaacgatgacaacattcgggct
atggagagtgaagtcaacgtgtgctacaaggagctgtgggggcccaaaccgggctaccag
ctcctcaccaaccagctgcagcgcctctgcatggtgctggatgtctacctggagacagag
ccccacgacaccactgtggaggggcccaaggagttcccccaggagaagatgtgcctgcgc
ctggtcaggggccccatgcgcttgaagccattcaagttcaactaccctcagggattcttc
agccaccgctga
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