Phasianus colchicus (Ring-necked pheasant): 116228440
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Entry
116228440 CDS
T07365
Symbol
HNF1A
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcoc03000
]
116228440 (HNF1A)
Transcription factors [BR:
pcoc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116228440 (HNF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
KPBB_C
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116228440
NCBI-ProteinID:
XP_031448116
Ensembl:
ENSPCLG00000005447
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MVSKLSHLQVELLGALLESGLTKETLIKALSEVEPYVLQSESQHAINALQTEKGESCPEI
PNLPNGMGETRLSEDETSDDGEEFTPPIMKELENLSPEEAAHQKAVVERLLQEDPWRVAK
MVKSYLQQHNIPQREVVDTTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREVAQQF
THAGQGVLTEEPMGDDLPTKKGRRNRFKWGPASQQILFQAYERQKNPSKEEREALVEECN
RAECIQRGVSPSQAQGLGSNLVTEVRVYNWFANRRKEEAFRHKLAMDNFSGPQPTSAPPL
TPHNSSSLQPPPALSPTKVHGVRYNQQPASEAESSSSNHHGNSSMVTTQTILHQVSPPGL
EPSQNLLSTDTKLISAPGGTLPPVSTLTALHSLEQNPHALGQQTQNLIMASLPGVMAIGA
GETSSLAPAFTNTGGSTLVIGLTSTQPQSVPVINSMGSSLTTLQPVQFSQQLHPSYQQPL
MQQVQSHINQSPFMATMAQIQNPHALYGPKSEVAQYTHTGLLPQTMVITDTANLSALTNL
TPTKQVTALKPGTINSFLQAFTSDSETHTDSGIHTPVSQAPAIHLQNQDTTIQHLQSGPR
LTSSPAVSSSSLVLYQSSDSTNSHSQLLPSTHNVIETFISTQMASSTQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgaagctgagccatcttcaagtggagctgctgggagcgctgctggagtcgggg
ctaaccaaggagaccctgatcaaggcactgagcgaagtggaaccctacgtgctccagagt
gaaagtcagcatgctatcaatgccctgcagacagagaaaggggagtcctgccccgaaatc
cccaatctccccaatggaatgggggaaaccaggttgtcggaagatgaaacctctgatgac
ggggaggaatttacccctccgataatgaaggagctggaaaacttgagccctgaagaggct
gctcaccagaaggctgtggtggaaagactattacaagaggatccctggcgggtagcaaag
atggtgaaatcctacctccaacagcacaacatccctcagcgtgaggtggtggacactact
ggtctgaaccaatcccacctctcacaacacctcaacaagggcactcccatgaagacccaa
aaaagggcagccctctacacctggtacgtccgcaagcagcgagaggtggcccagcaattc
acacatgctggccagggcgtcttgacagaggagcccatgggagacgatctgcccaccaag
aagggacgaagaaatcgctttaaatggggtcctgcctcacaacagattctgttccaagcc
tacgagagacagaagaacccaagcaaagaagagagagaggcactggtagaagagtgcaac
agagctgaatgtattcagagaggcgtttccccatctcaggcccagggtctgggctcaaac
ctggtgaccgaggtgcgagtttacaactggtttgccaaccgcaggaaggaggaggccttc
cggcacaaactggccatggacaacttcagtgggccgcagcccacctccgcccccccccta
actcctcacaactcctcctcccttcagccgcctcccgctctctcacccaccaaagttcat
ggagtgaggtacaaccagcagccggccagcgaggcagagtcgtccagcagcaaccaccac
gggaacagctccatggtgaccacacaaaccatcctgcatcaggtttctccccccgggctg
gagcccagccagaacctactgagcacagacaccaagctgatctcagctcccggaggaact
ctgccccccgtcagcaccctgactgccctgcacagcctagagcagaacccccacgcgctg
ggccagcaaactcagaacctcatcatggcctcactgcccggcgtgatggcaatcggagct
ggtgagacctcatccctggcacctgcattcaccaacaccggcggctccaccctggtaata
ggcctgacttcaacccagccccagagtgtacctgtgataaacagcatggggagcagcctc
accaccctgcagccagtccagttctcccagcagctgcacccgtcctaccagcagcccctc
atgcagcaggtccagagccacatcaaccagagccccttcatggctaccatggcccagata
cagaaccctcatgctctctacggccccaagtctgaagtggcccaatacacacatacaggc
ctcctaccacaaaccatggtgataacagatacagccaatctcagcgccctgactaacctg
acaccaactaaacaggtaacagccttaaaaccaggcactattaactcttttctccaggca
ttcacatctgactcagaaacccacacagactctgggatccatacaccagtatcacaggca
ccagcaatacacctacagaaccaagacacaaccatccagcaccttcagtctggcccacgc
ctcacctcaagccctgctgtgtcctccagcagcctggtgctgtaccagagctctgactcc
accaacagccacagtcagctgctgccatccactcataacgtcattgagaccttcatctcc
acgcagatggcatcctccactcagtaa
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