Phasianus colchicus (Ring-necked pheasant): 116228740
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Entry
116228740 CDS
T07365
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04142
Lysosome
pcoc04144
Endocytosis
pcoc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116228740
04142 Lysosome
116228740
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116228740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116228740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcoc04147
]
116228740
Membrane trafficking [BR:
pcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116228740
Exosome [BR:
pcoc04147
]
Exosomal proteins
Proteins found in most exosomes
116228740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
116228740
NCBI-ProteinID:
XP_031448714
Ensembl:
ENSPCLG00000005211
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKYICIREKVGEQAQVVIIDMSDPTS
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHAMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTASYEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEDMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFL
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTQEEDYQGLRTSIDAYDNFDNIALAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDNLDASESLR
KEEEQVTEPTPIVFGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcctatccgcttccaggagcactttcagctccaaaatttgggcatt
aacccagcaaacattggattcagcaccctaacaatggaatctgacaagtacatttgcatc
agggagaaagtgggcgagcaggcacaagtagtaataattgacatgagtgatccaacatca
cctatcagacgtccaatttctgctgaaagtgccatcatgaatcctgcctctaaagtaatt
gcactaaaagctggaaaaacacttcagatttttaacattgaaatgaaaagtaaaatgaaa
gcccacgctatggcggaggaggtgatcttttggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtctaccattggagcatggagggagaatctcagccccaaaag
atgtttgacaggcatgctagtcttgcaggctgccaaatcatcaattacagaactgatgaa
catcaaaaatggctgttgctgataggaatttcagcacagcaaaatcgcgtggttggtgca
atgcagctctactctgttgatagaaaagtctcccaacctatagagggccatgcagcagct
tttgcggaattcaaaatagagggaaatgccaaaccttccaccctcttttgttttgctgtg
aggagtcctgcaggaggcaagcttcacataattgaagtgggtcaaccagctactggaaat
cagccatttgttaagaaagctgttgatgtgtttttcccacctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcacggtgttatctacctgatcacaaagtatgga
tatattcacatgtatgacttggagtctggagtttgcatctacatgaaccgtattagtgcc
gacactatttttgtcacagcttcttatgaacctacctcaggcattattggtgtcaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacaaat
gttctccagaatcctgacttgggtctgcgtatggctatacgtagtaatcttgctggtgca
gaggaattatttgccagaaagtttaacacactgtttgctcaaggaagctatgcggatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagccagggcatgcctctccactgctccagtactttggaata
ttacttgaccagggacagctgaacaagtttgagtctctggagctctgtcgccctgttcta
cagcaaggccgcaagcaacttctggagaaatggctgaaggaagacaagctggagtgttcg
gaggagctgggagacttggtgaagacagctgacccaacccttgcgctcagtgtctatctt
cgtgctaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccagaaa
atagtactgtatgctaaaaaggttggctataccccagactggatcttcttgctgagaagt
gtgatgagagtcagtcctgagcagggcctgcagttctctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttattcag
caatgcacgtcctttctgttggatgctttgaaaaataaccgcccagcagaaggtcacctt
cagactcgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccatcctt
ggaaaccagatgtttacacactatgatcgtgctcatattgcccagttatgtgaaaaggca
ggcttgctccagcgagctttggaacactacactgatctctatgatattaaacgtgctgtt
gttcatactcatctcttgaatcctgagtggcttgtgaatttctttggctctctctctgtt
gaagactctgtagaatgcttgcgtgctatgctgtcagccaacattaggcaaaacttacaa
ctctgtgtacaggttgcttctaaatatcatgagcagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagatgttcacttcaaatatatccaggcagcttgcaaaactggtcag
ataaaggaagtagaaagaatctgccgtgaaagtaactgctataacccagaacgggtgaag
aactttctgaaggaggcaaagctaacagaccagcttcctctgatcattgtctgtgatcga
tttgactttgttcatgacctggtgctctacttatatcgcaatagcctgcagaagtatata
gagatctatgtacagaaggtgaaccccagccgcataccagcagtagttggaggacttctt
gatgtggattgttctgaagatgtcattaagaacttgatcatggtggttagaggccagttc
tcaacagatgagctggtggctgaagtggaaaaaagaaatcggcttaaattgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcaactcataatgccttggcc
aaaatctacattgacagtaataataatccagagcggttccttcgtgagaatccatactat
gacagtcgtgtagttggcaaatactgtgaaaagagagaccctcatctggcctgcgttgca
tatgagaggggccagtgtgatctggaactcataaaggtatgcaatgagaactcactattt
aagagtgaggctcgctatctagtacgcaggaaggaccctgaactctgggcaaatgttcta
gaagaaaacaacccattccggcgccagcttattgaccaagttgtccaaacagctttatca
gagacacaggatccagaggaggtttctgtcactgtgaaagctttcatgactgcagacctt
ccgaatgaattaattgagttattggaaaaaattgtcttggataattctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcactcgtgta
atggaatacattaatcgactggataactatgatgctccagatattgcgaacattgccatc
agtaatgagctgtatgaggaagcttttgctatattcagaaagtttgatgttaatacttca
gcagttcaggtgctgattgagcacattgggaatttagaccgtgcttatgaatttgcagag
agatgtaatgagccagcagtatggagccagctagccagagcacagctgcagaaagacttg
gtaaaagaagccattgactcctatataaaggcagatgatccatctgcctacatggaagtt
gttcaagcagctaatagaaacgataactgggaggacctagtcaagttcttgcagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgcctttgcaaaaact
aatcgtctttcagaactggaggaatttattagcggccctaataatgcccatatacagcag
gttggtgatcgttgttatgaagaggatatgtatgaagcagcaaaactactctataacaat
gtttctaactttgctcgcttggcatctaccttggtgcaccttggagagtaccaggcagca
gtggacagtggccgcaaagccaacagcacaaggacttggaaggaggtatgttttgcctgt
gtggatggaagagaattccgcttggcacagatatgtggcttgcatatagtcatccatgct
gatgaacttgaagagctgattagttattatcaggatcgtggctactttgaagaactgatt
gcccttctggaagctgctttgggcctagagcgtgctcacatgggaatgtttactgaactc
gccatcttatactccaaatttaagccccagaaaatgagggaacatctggagctcttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaaatacgaggagtatgataatgcaataattactatgatgaat
catcctactgatgcctggaaggaaggacagtttaaagatataattgccaaggtggcgaat
gtggagctgtattacaaagccttgcagttctacttagactacaaacctctgctgatcaac
gatcttctgcttgtattatctccacgactggatcacaccaggacagtcaattttttcttg
aaggttaatcagctgcttctagtaaagccttatttgcgttcagtgcagaaccacaataat
aaaggagttaatgaagctctaaacaaccttttaacacaggaggaggactaccagggtttg
agaacttccattgatgcctatgacaactttgataacatagctttggctcagcgtctggaa
aagcatgagctcattgaatttaggcgtattgcagcatacttgtataagggtaacaaccgc
tggaagcagagcgtggagctatgcaagaaagaccatctgtataaggatgctatgcagtat
gctgcagagtccaaagatgtagaactagcagaaaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgttttgcagcctgccttttcacatgttacgacttgctgcacccagat
gtagtccttgaattggcatggaggcataatatcatggacttcgcaatgccttatttcatc
caagtgatgagagagtacctcaccaaagtggataatcttgatgcttctgaaagcctaaga
aaagaagaggaacaagtaactgaacctactccaatagtatttgggcagcagttgatgtta
acagcaggccccagtgcagtacctccccagacaaattttccgtatggatacacagcacca
ggattcacccagccacctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
