Phasianus colchicus (Ring-necked pheasant): 116228879
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Entry
116228879 CDS
T07365
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcoc03036
]
116228879 (DICER1)
Chromosome and associated proteins [BR:
pcoc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116228879 (DICER1)
microRNA pathway
RISC loading complex
116228879 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
ResIII
DEAD
Helicase_C
Cas3-like_C_2
Amidoligase_2
Motif
Other DBs
NCBI-GeneID:
116228879
NCBI-ProteinID:
XP_031448903
Ensembl:
ENSPCLG00000005669
UniProt:
A0A669PCR1
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLA
IQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIKKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLRELDEALHFLNDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETE
TEPIVDDDDVFPPYVLRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPD
HTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVDDSSTLDIDFKFMEDI
EKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGV
GVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSSLVENENYCKHSTIVVPENAAHQGANR
TSSAEKHDQMSVSYRTLLDESPSKLQIDVSAELAAINGVSYNKNLANGNCDLVNRDFCQG
NQLNYCRQEIPVQPTTSYPIQNLYSSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKMT
VTTSTSTALNLSKDKMDSEKNTSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYIVNQDKSNTDKWEKDETTKENLLANGKLDYDDDDEEDEDLMWRLPKEETDFEDD
FLEYDQEHIKFIDSMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSLGNVPFSSDFDDF
DYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATRENCNSEQKNLSPNS
VSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKA
YLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVN
NTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEED
IEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEME
PETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPN
S
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaatccctcagcatggcgggactgcagctcatgacccctgct
tcctccccaatgggtccattttttggactaccatggcaacaagaagcaattcatgataac
atttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataataca
atagtctgtttaaacactggctcagggaagacttttattgcagtactactcactaaagag
ctgtcctatcagatcaggggggatttcaacaaaaatggaaaaagaactgtgttcttggtc
aactcagcaaatcaagttgctcagcaagtatcagctgtcaggacacattcagatcttaaa
gtgggagagtattcaagtttagaggtgactgaatcatggacaaaagagaaatggagtcag
gaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgaga
aatgaatatttatccctgtcaaatattaatctactggtgtttgatgagtgccatcttgca
atccaggaccatccgtaccgtgaaattatgaagatctgtgaggattacccatcttgccct
cgaatcttgggattaactgcttccattttaaatgggaagtgtgatcctgctgagctagaa
gagaagataaagaaactggagaaaatactaaagagcaatgctgaaactgcaactgatttg
gtggtcttagatagatatacttctcagccatgtgagattgttgtagactgtggaccatat
actgacaaaagtggattgtatggaagactattaagggagttggatgaagcacttcatttt
ctaaatgactgcaacatatctgtacattcaaaggaaagagattctacgttaatttctaaa
cagatattgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataag
gtagctgggatgatggtgagagagctacagaagtatatcaaacatgagcaagaggagctg
cacaggaaatttttattgtttacagacactttcttaaggaaaatacatgcactctgtgaa
gagcatttctcacctgcctcacttgacctgaaatttgtaactccaaaagtaataaagctg
cttgaaattttgcgcaaatacaaaccatatgaacggcagcagtttgaaagtgttgaatgg
tataacaacagaaatcaggataattacgtatcgtggagtgattctgaagatgatgatgag
gatgaagaaattgaggagaaagagaagccagagactaatttcccatctccttttacgaat
attttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttg
ataaaagaagctggcaaacaagatccagaactggcttacatcagtagcaatttcataact
ggacatggcattggcaagaatcagcctcgtaacaagcagatggaagtagaattcagaaaa
caggaagaggttcttagaaaatttcgagcacatgagaccaatcttcttattgctaccagt
attgtagaagagggtgttgacataccaaaatgcaatttggtggtgcgttttgatttgccc
acagaataccgttcctatgtgcagtcaaaaggaagagccagagcaccgatttccaattac
ataatgttagcagatacagacaaaattaaaagttttgaagaagatcttaagacgtataaa
gcaattgagaagatcctgagaaataaatgctcaaaatctgttgataccagcgaaacggaa
actgaacccattgttgatgatgatgatgtgtttccaccctatgtgctgaggacagatgag
aacagtccaagagttactatcaacacagctattggacacataaataggtactgtgctaga
ttaccaagtgatccatttacacacctagctccaaagtgtaaaaccagagaactacctgat
catacattctactctactctctacctgccaatcaactcacctcttcgagcgtcaattgtt
ggtcctccaatgagttgtgcaagattggctgagagagttgtagctcttatttgctgtgaa
aaactgcacaaaattggtgaactggatgatcatttgatgccagttggaaaagaaacggtt
aaatatgaggaagagcttgatttacatgatgaagaagaaaccagtgtgccaggaagacca
ggctctacaaaaagacgacagtgctaccctaaagctattccagaatgtttgagggatagt
tatcccaaacctgatcagccctgttacctgtatgtaataggaatggtgttaactactcca
ttgcctgatgagctcaactttaggagacgaaagctatatcctcctgaggatacaacgaga
tgttttggcatattgacagccaaacctatacctcagattcctcactttcctgtgtatact
cgctctggagaggttacaatatctattgaacttaagaaatctggttttactctgtctttg
caaatgcttgagctgataacacgactccaccagtacattttctcacatattcttcgtctt
gagaaacctgcactagagttcaaacccacagaagctgattcagcctactgtgttctacct
cttaatgttgttgatgactccagcactttggacattgactttaagtttatggaagatatt
gagaagtctgaagcgcgtacaggcattcccagtacacagtatacaaaagaaatgcctttt
attttcaagttagaagactaccaggatgcagttatcattccacggtatcgaaattttgat
cagcctcatcgattctatgtagctgacgtatacactgatcttactccactcagtaaattc
ccttcccctgaatatgaaacttttgctgaatattataaaacaaaatataatcttgatctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
actcctcgccatttaaatcagaaggggaaagcacttccactaagcagtgctgagaagagg
aaagcaaaatgggaaagtctgcagaataagcagatactggttcctgagctatgtgctata
catcctattccagcatctttgtggagaaaagcagtttgcctccccagcatactttatcgc
ctgcactgccttttgacagcagaggaactaagagctcaaacagccactgatgctggtgta
ggggttaaatcactacctgcagatttcagatatcctaacctggacttcggatggaaaaaa
tctattgacagcaaatctttcatctccatacctagctcctctttggtagagaatgaaaat
tactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaataga
acctcttctgcagaaaaacatgaccaaatgtctgtgagttacagaacactgcttgatgag
tcacccagtaaactccaaattgatgtctcagcagaacttgcagcaattaatggtgtttct
tataataaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaagga
aatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacagcagtgagaaccagcccaagcccagcaatgaatgtactctactgagt
aataaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaatgaca
gtgaccaccagtacttcaacagctcttaatctttcaaaagacaaaatggattctgaaaag
aacacttccagtgggtactcctcaaaaactctcggtcctaatcctggtctcattcttcag
gctttgactctttcaaatgctagtgatggatttaatctggagcggctagaaatgcttggt
gattcatttttaaagcatgccatcactacgtacttgttttgcacttatcctgatgcacac
gagggacggctgtcgtacatgagaagtaaaaaagtcagcaactgtaacttgtatcgcctt
ggaaaaaagaaaggactgcctagtcgaatggtggtatcgatttttgatccccctgtcaat
tggcttcctcctggttacatagtaaaccaggacaagagcaacactgataaatgggagaaa
gatgaaacgacaaaggagaatttgttggctaatggtaaacttgactatgatgatgatgat
gaagaggatgaagacctgatgtggagattgcccaaggaagaaacagactttgaagatgat
tttttggagtatgatcaagagcatatcaaatttatagatagtatgttaatgggatcgggg
gcttttgtgaagaaaatttctctctctcacttttcaaccactgattcaaattatgaatgg
aaggcacccaaaaagtcatccctgggtaacgttccgttttcttcagattttgatgatttt
gactatagttcttgggatgctatgtgttatctggatcctagcaaggctgttgaagaggat
gattttgtagttggcttctggaatccatcagaagaaaactgtggtgtcgatgcaggaaaa
cagtctatctcctatgatttgcatacagagcagtgtattgctgacaaaagcattgcagac
tgtgtggaagccctgttgggctgctatctaaccagctgtggtgaaagagctgctcagctt
ttcctgtgttcactggggctgaaggtgctccctgtaattaaaaagactgattgggaaagc
actctgtgtgcgaccagagagaactgtaacagtgagcagaagaatctttcaccaaactct
gtttctgcttgtatagttaattcagagccttctctttataaagacctggagtatggttgt
ttgaagatcccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcac
cttatttctggttttgaaaactttgagaagaaaattaattacagttttaagaacaaggcg
tatcttcttcaggcatttactcatgcctcataccattataataccattactgattgttac
cagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttat
gaagacccacggcaacactcaccaggagttcttactgacctgcgatctgctctagtcaat
aataccatttttgcatcgctagctgtaaagtatgactaccacaagtacttcaaagctgtc
tctcctgagctgtttcatgttattgatgactttgtgcagtttcaaatggaaaagaatgaa
atgcaaggaatggattcagagctcagaagatctgaagaagatgaagaaaaggaggaagac
attgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgccatttatatg
gatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccatta
atagaaaaattttctgctaatgtgccccgttccccagtgcgagagctgcttgagatggag
ccggagacggccaaatttagtcctgcagaaagaacttacgatggaaaggtcagagtaact
gtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacaggattgccaaa
tctgcagctgcaagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaac
agctga
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integrated database retrieval system
