Phasianus colchicus (Ring-necked pheasant): 116229070
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Entry
116229070 CDS
T07365
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116229070 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116229070 (CLP1)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
116229070 (CLP1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
116229070 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
TniB
MMR_HSR1
AAA_18
ATP_bind_1
AAA_16
AAA_22
CbiA
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116229070
NCBI-ProteinID:
XP_031449134
Ensembl:
ENSPCLG00000006411
UniProt:
A0A669PJT9
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADDGGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatggcggcgatgagaagaagcaggtggcaaaattcgagctggagcgggag
acagagctgcgtttcgaagtggaggcttcgcagacggtgcagatggagctgctcaccggc
atggctgaggtgtttggcaccgagctgacccgcaataagaagttcacctttgacgctggt
gcaaaggtggccgtcttcacctggcacggttgcaccgtgcagctcagcgggcgcaccgag
gtggcatacgtctccaaggacacccccatgctgctctacctcaacactcacacggccctg
gagcagatgcggcggcaggcagagcgcgaggacgagcgggggccccgtgtcatggtggtg
ggccccaccgatgtgggcaagtcgactgtgtgccgcctgctgctgaactatgctgtacgc
ctggggcgccggcccacctttgtggagctggacgtggggcagggctccgtctccatcccc
ggcaccatgggtgccctctacatcgagcgaccagctgacgtggaggagggcttttccctg
caggccccgctggtctaccactttggctccaccacacctggcaccaacatcaagctctac
aacaagatcacatcccgcctggccgatgtcttcaaccagcgatgtgaagtgaaccgccgt
gcatcggtcagtggctgcgtcatcaacacatgcggctgggtgaaaggctcgggctaccag
gcgctggtgcacgctgcctcagcttttgaggtagatgtagtggtggtgctggaccaggag
cggctctacaacgagcttaagagggacctgccccactttgtgcgcactgttttgctcccc
aaatctggtggagtggtggagcgctccaaggacttccggcgggagtgccgagatgatcgc
atcagggaatatttctatggcttccggggctgcttctaccctcacgcctttgacgtcaaa
ttctctgatgttaagatctacaaggtgggggctcccaccatccctgactcctgcctgcca
ctgggcatgtcgcaggaggacaaccagttgaagctggtgccggtgacgccagggcgggac
atggtgcatcacctgctgagcgtcagcatggccgacagccccgatgacaacatctcagag
accagtgtggctggcttcattgtggtcaccggcgtagacctggaacgccaggtgttcact
gtgctctcgcctgctcctcgcccactgcccaagaacttcctcctcatcatggacatccgc
ttcatggacctgaagtag
DBGET
integrated database retrieval system
