Phasianus colchicus (Ring-necked pheasant): 116229102
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Entry
116229102 CDS
T07365
Symbol
CAPRIN1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116229102 (CAPRIN1)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
116229102 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
DUF1140
Motif
Other DBs
NCBI-GeneID:
116229102
NCBI-ProteinID:
XP_031449189
Ensembl:
ENSPCLG00000006704
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MGERRREAARHVTALRAPGAESGGRGRARPAGAAGARPSWAWGSGRVRARPPACPLRRPV
LLTRALSRAEMPSATNSTMASSSSGKAGPGGNEQAPAAAASAPQASGGSITSVQTEAMKQ
ILGVIDKKLRNLEKKKSKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSF
MALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQFILDKLGDDEVRSDLKQGSNGVP
VLTEEELTMLDEFYKLVYPERDMNMRLNEQYEQASVHLWDLLEGKEKPVCGTTYKALKEV
VERILQTSYFDSTHNHQNGLCEEEEAAPTPAVEDTAAEGEPDPAEEFTEPTEVESTEYVN
RQFMAETQFSSSEKEQVDEWTVETVEVVNSLQQQTQATSPPVPEPHALTTVAQADPLVRR
QRVQDLMAQMQGPYNFMQDSMLEFENQTLDPAIVSAQPMNPAQNLDMPQMVCPPVHTESR
LAQPNQVPVQPEATQVPLVSSTSEGYTASQPMYQPSHSTEQRPQKESIDQIQASMSLNAD
QTPSSSSLPTASQPQVFQAGSSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLK
QQNQYQASYNQSFSNQPHQVEQSDLQQEQLQTVVGTYHGSPDQTHQVAGNHQQPPQQNTG
FPRNSQPYYNSRGVSRGGSRGTRGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQPQF
NAPRDYSNYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQVN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcgccggcgcgaggccgcccgtcacgtgaccgccctgcgcgcgcccggggcc
gagtcggggggacgggggcgcgcgcggccggcaggtgcggctggcgcgcgtccgtcctgg
gcgtggggaagcggccgtgtgcgcgcccgccctcccgcgtgtcccctccggcggcccgtt
ctcctcacgcgcgctctctcccgcgcagagatgccctcggctaccaacagcaccatggcg
agcagcagcagcgggaaggcgggccccggcggcaacgagcaggccccggcggcggcggcg
tcggccccgcaggcgtcgggcggcagcatcacctcggttcagaccgaggccatgaagcag
atcttgggcgtgatcgacaaaaagctccgcaacctcgagaagaaaaagagcaaacttgat
gactaccaggaacgaatgaacaagggagaacgtctaaatcaagatcaactggatgcagta
tcaaaataccaggaagtgacaaataatctggaatttgctaaagaactgcagaggagcttt
atggcactgagccaagatatccagaaaacaataaaaaagacagctcgcagggagcagctg
atgcgagaagaggctgagcagaagcgtttaaagactgtgctggagctgcagtttattttg
gacaagttgggtgatgatgaagtgcgtagtgacttgaaacaaggatcaaatggagtacct
gtactgacagaagaggaactgacaatgctggatgaattttacaagctagtttaccctgaa
agagacatgaacatgaggttgaatgagcagtatgagcaagcatctgttcacctgtgggac
ttactggaagggaaggaaaaacctgtttgtggaacaacctataaagccctaaaagaggtt
gttgaacgtattcttcaaactagctactttgatagcacccataaccatcagaatggatta
tgtgaggaagaagaggcagcacccacacctgcagtagaagacactgcagcagaaggtgaa
cctgatccagcagaagaatttactgaacctactgaagttgaatcaactgagtatgtaaac
agacaattcatggcagagactcagttcagcagtagtgagaaggaacaggtagatgagtgg
acagttgaaacggttgaggttgtaaattcactgcagcaacaaacacaggctacatctcct
ccagttcctgaacctcatgcactcactactgtggctcaagcagatcctcttgttagaaga
cagagagtacaggaccttatggcccagatgcagggtccatataacttcatgcaggactct
atgctggagtttgagaaccagacacttgatcctgccattgtatctgcacaacccatgaat
ccagcacagaatttggacatgccgcaaatggtctgccctccagttcatactgagtcaaga
cttgcccagcctaatcaagttcctgtgcaaccagaagctacacaggttcccttggtttct
tctacaagtgagggatatacagcctcccaacccatgtatcagccttctcatagcacagag
cagcggccacagaaggaatcaattgaccagattcaggcttcaatgtcactgaatgcagac
cagaccccgtcatcatcatcacttcccactgcatcccagccgcaagttttccaagctgga
tctagcaaacctttgcatagcagtggaatcaatgttaatgcagctccattccaatccatg
caaacagtattcaacatgaatgcacctgttcctcctgttaatgagccagaaacccttaag
caacaaaatcagtaccaggccagttacaaccagagtttctccaatcagccacaccaagta
gaacaatcagatcttcagcaagaacagctccagacagtggttggtacttaccatggttct
ccggaccagacccatcaagtggcaggaaaccatcagcaacctccccaacagaatactgga
tttccacggaacagccagccttattacaacagccggggagtgtctcgtggtggatcacgt
gggactcgcggcttgatgaatggttacaggggacctgcaaatggatttagaggaggatat
gatggctaccgtccctcattttccaacactccgaacagtggttacacgcagccccagttt
aatgctcctcgagattattcgaactaccagcgggatggatatcagcagaacttcaaacgt
ggttctggacaaagtgggcctcggggagctcctcgaggtcgtggaggacccccaagacca
aacagagggatgcctcaaatgaacgctcagcaagtgaattaa
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