Phasianus colchicus (Ring-necked pheasant): 116229205
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Entry
116229205 CDS
T07365
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcoc03021
]
116229205 (RPAP1)
Transcription machinery [BR:
pcoc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116229205 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
GMIP-like_FCH
Motif
Other DBs
NCBI-GeneID:
116229205
NCBI-ProteinID:
XP_031449383
Ensembl:
ENSPCLG00000007262
UniProt:
A0A669Q420
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MFSRPKPGESEADLIHFQNQFLAARASPAVKIVKKADKRKGEERNTDAERPQPQDSKDVV
MLDDFPDILPALTPGPPKKSKIKSACVHFDDEDPEERLENHDQHITAVFSRIIERDTSAE
AVTMPVPTGDPFPRIFHRSEIKSEVKVGSGRKSIFAQKMAARRAAEKPATAPSAECTQIA
AAPLDILNPEGSAEEALEANSGNRDNKADDVFISQRPCIITGEGLGSQKSEQEAQAIHEE
NLEKLQSMSQEEILKEQERLLAQLDPSLVAFLKSRRSGNVGQKNEIKMEQNRPEEFVESL
TVPQRGVGTSLSMQESGLQESVRRDENLKMEITDDDLPVKPRKEWIHMDNVEFEKLEWMK
DLPSSRQKKTKKGMQARFSLKGDLIPADADLPTHLGLHHHGEEAERAGYSLQELFHLSRS
QLIQQRTLALQVLGRIVQKARAGEFASSLKGSVLRLLLDAGFLFLLRFSLDDAVDNVMAA
SVGALRALLVSSDDEKYLDWTFSWYQGMAAFPFVPSNEEEEEEEEEESTGTEKSQNKKQK
DENKPDADVARYDVVKGLLKTRIQHRLRYILEVVRPVPTVVLDILHILTHIARHSSEACI
QLLDCPRLIETIVREFLPTRWDPHVAEPGCLLTSLHGVACAAAMKFIRVLASGGRNATAR
LLNKFEMKSRLIRFTAEDPQDLLLPREEAIRLNTEAFRLWAVAAGYGQACDLYRDLYPVL
VRILQSLPELLSTSHEKNPMFELSVQRAAAVVTLLVHVTQTAGCTVELHTRLSSCEDSEQ
IPPPPVMWNQVSGLQPFLETSMKKFLQVISWTETWQILQPLTTTYMIYLGVYYSACSQQP
SVNPVDCLEELERLTSEVLQPLLSQPAMHSMWDLLRPCSALCNPLSCSPAPESVFSIVSL
SCTGGKPPLSLVGSKSPFPFLTALLFLIDSITHIHKGLISKYSSVLSFEGLKDYLHQSWQ
TAPPSVTLASAWMLRHEYHLQYFALALARKMAGTCPDYSRHASLYHCVAMALLSRLLPGS
EHLAYEILLDLAFSPEFLPEGKTGGPEAADFSDILHLGTSAKLSQPGSAAASSSKPTRGA
LLRESYQNLPAIRSCYLSHFVHLQPALVRSQASYQGRNYLIQSMLLPEVRGPILPSDWPF
FPLISLYNKVSNAETRGAVLNSLPLDLVNTVTWNLQWVLLLETWRSKTLQSIPTAAKLAR
LMCIFLTGGDLFLEAPIHCYTAALLSVYCQPKALDSLNLDAPLPGLASFHDLYISLLEQF
EGVSFGDPLFGVFVLLPLQKRFSVHLRLSVFGEHTSILRALGVPLQQFPVPLERYTSPPE
DNLNLLRHYFRTLVTGALRNTWCPVLYVVAVAHVNSFIFSQDSTTQEADAARKSMLRKTW
LLVDETLKKHLLYYRLLNAESPLGFDLYEQLPPIRLKYLQMVTQKDNKENAPVLVS
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaagaccaaagcctggtgagtctgaggcagacctgatacactttcaaaaccag
ttcctggcagcccgagcttcacctgcagtaaagattgtgaagaaagcagacaagaggaag
ggagaggaaaggaacacagatgctgagagaccccagccacaggacagcaaggatgtggtc
atgctggacgattttcctgatattctccctgctctaactcctggtcctccaaaaaagtcc
aaaatcaaaagtgcctgtgtccactttgatgatgaagatccagaagaaagactagagaat
catgatcaacacattacagcagtcttcagcagaatcatcgaacgagacacaagtgcagaa
gcagtgaccatgccagtgcccactggagacccatttccaaggatatttcaccgttctgag
ataaaaagtgaggtgaaggtgggatctggaagaaaaagcatctttgcacaaaagatggca
gcaagaagagctgctgaaaagccagcaacagctccctctgctgagtgcactcaaatagca
gcagctcctctggacattctgaatcctgagggatcagcagaagaggcactggaagctaac
tccggcaacagggataataaagctgatgacgttttcatctctcagcggccttgtatcata
acgggagagggtcttggaagccaaaagagtgagcaggaagctcaggctatccatgaagag
aatttagagaagctgcagtccatgtcccaggaagagatcctgaaggagcaggaaaggctt
ctggctcagctagatcccagtttagttgctttcttaaagtcacgacgcagtggtaatgta
ggccagaaaaacgaaataaaaatggaacagaacagaccggaggagttcgtggaatctctg
actgtgcctcaacgtggtgtaggaacgtcactttccatgcaggagtcaggtctgcaagaa
tctgtaaggagggatgaaaatctgaaaatggaaatcacagatgatgatctgcctgtgaag
ccaaggaaagaatggattcacatggacaatgtggagtttgagaagctggagtggatgaaa
gatttaccttcctcccggcagaagaaaactaaaaagggaatgcaagctcgattcagttta
aaaggagacttgattcctgcagatgctgatttgcctactcatctaggtctgcatcaccat
ggagaagaggcagagagggctggttattctctccaagagctctttcatttgtctcgcagc
cagcttattcagcagaggacactggccctacaggttttgggtcgtattgttcaaaaggcc
agggctggagagtttgcttcctccttgaagggcagtgttctgcgtctccttctcgatgct
ggatttctcttcttgctgcgcttctctctggacgatgccgtggataatgtcatggcagcg
tctgttggtgctctccgagctctgctggtgtcatctgatgatgagaaatatcttgattgg
actttctcatggtaccaagggatggctgcgttcccgtttgtccccagcaatgaggaagaa
gaagaggaagaagaagaagaatcaactggaacagagaagtctcagaataaaaaacaaaag
gatgaaaacaagccagatgcagatgtagcccgttatgacgttgtaaagggacttctgaag
acacggattcagcaccggctgagatatatccttgaggtggtacgacctgttccaacagtt
gtcctggatatcctgcacatccttactcacatagcaaggcactcctctgaagcatgcatc
cagctgcttgactgtcctcggttgattgaaaccattgtcagggaatttctccctactcga
tgggatcctcatgtggctgaaccaggatgtttactcaccagtctccatggagttgcttgt
gctgctgctatgaagttcatcagagtattggcatctggaggcagaaatgcaacagccagg
ctgcttaacaagtttgaaatgaagagccggttaattcgatttacagctgaagatccgcag
gatctgcttctgccaagggaagaggccatcagactgaacactgaagcctttcggctctgg
gcagtggctgctggttacggtcaggcctgtgacctctaccgggatctctatcctgtgctg
gtgaggatactgcagtccctgcctgagttgctcagcactagccatgagaagaaccccatg
tttgagttatctgtccagcgagctgcagcagtggttactctgctggtacacgtgacgcaa
actgcaggctgcacggtggagctgcacaccaggctgagcagctgtgaagacagtgaacag
attccacctcctccagtaatgtggaatcaagtgtcaggcttacagccctttctggagacc
agcatgaaaaaattcctgcaggtgatatcttggacagaaacttggcaaattcttcagcct
ctgaccacaacttatatgatctacctaggagtttattacagtgcttgcagtcaacagcca
tcagtcaatccagttgactgcttagaggaattggaacgtttgacatctgaggtgctgcag
cctctgctcagccagccagccatgcacagcatgtgggatttgctcaggccatgttctgct
ctgtgcaaccctctgtcctgttccccagcacctgaatctgtcttcagcattgtatctttg
agttgtactggaggcaaacctcctctgagcctagttggctccaaatcacctttccctttc
ctcactgccctcctatttctcatcgatagcatcacccatattcacaaaggactaatcagc
aagtacagctctgtgctgagctttgaaggcctgaaggattatctgcatcaaagctggcag
actgcacccccctcagtaactctcgcatctgcatggatgctgcgccatgagtatcatctg
cagtactttgctttagcattggctaggaaaatggcaggcacttgtccggattacagccgt
catgcctcgctctatcactgtgttgccatggcattgctgagccgtctgttgcctgggagc
gagcatctggcttatgagatcctgctggatcttgcctttagtccagagtttcttcctgaa
gggaaaactggaggaccagaagcagccgacttttctgatatcttgcatctgggtaccagc
gccaaactgtcacagcctggttctgcagcagcatcatcttcaaagcctactcgtggtgcc
ctgctgagagaatcataccagaatctgcctgccatccgctcctgctacctctctcatttt
gttcacttgcagcctgcccttgtgcgttcccaagcatcctaccaaggacgtaattacctc
atccaatcaatgctgcttcctgaagtcagagggcccatcctgccttcagactggccgttc
tttccacttatcagcctctacaacaaagtgtctaatgcagagacgcgtggggctgtgctg
aactctctcccacttgatctagttaacactgtgacctggaaccttcagtgggtcttgttg
ctggaaacttggcgttcaaaaacccttcagagcatccctactgctgccaaacttgcacga
cttatgtgcatcttcctcacaggtggtgacctctttctagaagcaccaatccactgttac
acggctgcacttctttctgtgtattgccagcctaaggctctggactccctgaacttggat
gctccgctccctggtttagcgtccttccatgatctctatataagtctgctggagcagttt
gaaggtgtctcttttggagatccactctttggagtctttgttcttctacctctgcagaag
cgtttcagtgttcatctgcgtctttctgtgtttggggagcacacaagtatcctgcgggca
ctgggagtgccccttcagcagtttcctgtgcctctcgagcgatacacttcccctcctgag
gataacttgaacctcctgcgacattatttccgaacactggtcacaggtgcactgcgcaac
acctggtgccctgttctttacgtggtggccgtggctcatgtgaacagctttattttctcc
caagacagcacaactcaggaggctgatgctgctcggaaaagcatgctgcgaaagacttgg
ctcttggtggatgagaccttgaaaaagcaccttctctactacagactgctgaatgcagag
agccctttgggctttgacctttatgagcaactccctcctatacgactgaagtacctgcag
atggtgacgcaaaaagacaataaggagaacgcaccagtgcttgtctcatag
DBGET
integrated database retrieval system
