Phasianus colchicus (Ring-necked pheasant): 116229659
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Entry
116229659 CDS
T07365
Symbol
CSTF2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116229659 (CSTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116229659 (CSTF2)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
116229659 (CSTF2)
U7-dependent histone pre-mRNA processing factors
116229659 (CSTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116229659
NCBI-ProteinID:
XP_031450147
Ensembl:
ENSPCLG00000006278
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVN
PEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPNAQMNPQNTPSSQPQPIGG
MHVNGAPPLMQPPMQGGVPAPGQMAAAVQGPGPGPMAPGGGLQPQVGMPGGGPVPLERGQ
GTLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLS
VTGDVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVG
RDPRGLEPRGLEPRVMEARGLEPRGMEPRVLEPRVLEARAMEARVMESRGLEPRGPGPNP
RGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQ
VTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctgtcggtgcgcgacccggccgtggaccgctctctgcgctcggttttcgtg
gggaacatcccgtacgaggccacagaggagcagctgaaggacattttctccgaggtcgga
ccggtggtcagcttcaggttggtgtatgacagggagacaggaaaaccgaagggatatggc
ttctgtgagtaccaggaccaggagacggccctcagtgccatgcggaacctgaatggacgg
gagtttagtgggagggccctccgtgttgacaatgcagccagcgagaagaacaaggaggag
ctgaagagcttggggacaggtgcaccgatcatagagtcaccctatggggaccctgtcaat
cctgaggatgcccctgagtccatcagccgtgcagtggccagtctgccgcctgagcagatg
tttgagctgatgaagcagatgaagttgtgcgtccagaacagccctcaggaagccaggaac
atgctgctgcagaacccccagctggcttatgccctactacaggcccaggtggtaatgagg
atcgtcgatccggagattgcactgaaaatcctgcatcgtcagaccagcgttcctcctctg
atcccaggcaaccagcaggctgtgccaggacctgggccaggaccaggacctgggccaggg
cctaatgcccagatgaacccacagaataccccatcatcccagccacaacccataggtggc
atgcatgtaaacggcgctccccctctgatgcagccgcctatgcagggaggagtgccagcc
ccaggacagatggcagctgctgtgcagggccctggccctggccccatggctccaggaggt
ggattgcagccgcaggtcggcatgcctggaggagggcctgtgccattggagcgtggacaa
gggaccctgcagctctcgcccgtgggacctgccaggcctgcgtctatcgaacgcgttcaa
gtgcccatgccagacccgagggcccctatgcagcgtggacctctacctgctagtggcccg
ccaccccgaggccttttgggagatgccccgaatgaccctcgtggagggaccctgctctca
gtcactggagatgtggagcccagaggttaccttgggccaccccaccaaggagcccctatg
catcatatgcctggccacgatagccgtggccccccccatgagatgaggggtggacccatg
ggagaaccccgaccactgatgggagagccacgggggcccttgatggatgctcgagttgga
agagatccccgagggctggagccacgagggctggagccccgggtgatggaggcgcggggc
ctggagccaaggggcatggagccacgggtcctggagccacgagtgcttgaagccagggcc
atggaggccagggtcatggagtcccggggcctggagcctcgagggcctggtcccaaccca
cgtggcccgatgccaggtggcatacagggtcctggaccacttaatatgggagccagcggt
ccacaggggccccgccaggttcctaacatggcaggggctggcatgcaaggagggggcatt
cctggggctggggtccagggagctggtcagcctggaggcttcagtcctggacagagccag
gtcaccccccaggatcatgagaaggcggccctgatcatgcaggttctgcagctgacagca
gaccagatcgccatgctgcccccagagcaacggcaaagcatccttattctaaaggagcaa
atccagaaatctacaggggcaccctga
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