Phasianus colchicus (Ring-necked pheasant): 116229738
Help
Entry
116229738 CDS
T07365
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116229738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116229738
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116229738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
116229738
NCBI-ProteinID:
XP_031450288
Ensembl:
ENSPCLG00000006628
UniProt:
A0A669Q1T9
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MATELEPPAAGAVSGGAPLEAEEDEEHWLYGDDTTGKQEDGPTSGHAESSHPLQDAPQEN
RPVGNEDREVSQHALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPAQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGASGSGSSHWEYSGSRRERERERERERDRDRTPTTSEYNNEDERYRYYGRERSYDFER
DYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEE
KETSEDGTQEGEEQDSKE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggccggggccgtgtcgggcggggcgccgctggag
gcggaggaggacgaggagcactggctgtacggcgatgacaccactggtaagcaagaagac
ggaccaacttctggacatgcagaatcttctcatcctctgcaagatgctcctcaggagaac
cggcccgtcggcaacgaagaccgagaggtgtcacagcatgcccttccaagtggagaagat
gatgaagaagacagtgatagtgacagcgatgatgacgacgtgaaggttactattggcaat
attaaaactggagcaccatcatacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgatttagatgcc
gcagggaatataaacggattgcctgttatagaagtggatttagattcgtttgaagacaaa
ccatggaggaaaccaggtgctgatctttctgattactttaattatggattcaatgaagaa
acgtggaaagcttattgtgaaaagcagcgacggcttcagcttgggctggatcctgctcct
cccatcagcactgagaataaaatcacagtccagcaaggaagaacaggaaatgcggaaaaa
gaagtggaaaacaatataatcaaaacagaattcaaaacagacttcttggctcttgtggga
ggacgtatgaaagctgggcctcctcctaataggaagctgggtgggacaattgatgtgatt
ggtggccaggctggcacaattaggagagtggaaggaagacgacgtgataagcatgcctct
gaagaaaatccaattcaggttctcggggatcatggaagcaagccccagcccccgcagcag
ccccagcagccggcgcagccacagcagccccctcagcagcagccctttgctcccccagct
ggtcctccaccacccccacttgccggaccgccgccaccgcatttcctgcatcctcctcca
cctgtcacttctgtgccaccaccactgcatcctccaggtctgccaccacccggtccaatt
ccagggctcttcccgccgcctctggccccgccaccagctctcctcatcccaacgctggat
gggcagccagccagctacaacaacagacagccccctccatttggctacaactctgcagac
tcgggtttcatcagctacccacccatctccacatcccacacgccttgggtgaccacggtg
gacaaaggcgcaagcggctctggcagcagtcactgggagtactcgggctcacggcgcgaa
cgggagcgggaacgggagcgggaacgggacagggaccgcacgcccaccaccagcgagtac
aacaacgaggacgagcggtaccgctactacggccgggagcgcagctatgactttgagcgg
gactatcgccgcagccgggaccgcagccgggagcgggaggaccggcaccgggagcgcagg
caccgcgacaaggaggagagcagcaagcacaagtcctcgaggcgcaagcagcacgagagc
gaggaaggggagagccatcggcgccacaagcacaagaagaacaagcgcagcaaggaggag
aaggagaccagcgaggatggcacccaagagggagaggagcaggacagcaaggagtga
DBGET
integrated database retrieval system
