Phasianus colchicus (Ring-necked pheasant): 116229944
Help
Entry
116229944 CDS
T07365
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc03015
mRNA surveillance pathway
pcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116229944 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
116229944 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoc03019
]
116229944 (PABPC4)
03041 Spliceosome [BR:
pcoc03041
]
116229944 (PABPC4)
Messenger RNA biogenesis [BR:
pcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116229944 (PABPC4)
mRNA cycle factors
Stress granule specific factors
116229944 (PABPC4)
Spliceosome [BR:
pcoc03041
]
Complex C
Other components
Complex C specific factors
116229944 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
116229944
NCBI-ProteinID:
XP_031450597
Ensembl:
ENSPCLG00000007188
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MSAAGSGYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMAQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPTLRHLAPAGTAPVSRGLPVS
AQRVGVSTAGQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPPVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKDAKKPNSPSPDVSSRCLQILHCPAGLLAVRRIA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggcgggcagcggctaccccatggcctcgctgtacgtgggcgatctgcacccc
gacgtgaccgaggcgatgctgtacgagaagttcagccccgcggggcccgtgctgtccatc
cgcgtgtgtcgcgatatgatcacccgccgctccctcggctacgcctacgtcaacttccag
cagcccgccgacgctgagcgtgctctagacaccatgaactttgatgtgatcaaaggaaag
cccattcgcatcatgtggtctcagagggacccctcgttgaggaagtcaggggttgggaac
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacgttctca
gcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggag
gctgagctgggagccaaggcaaaggaattcaccaacgtttatattaagaactttggggat
gacatggatgatgaaagactaaaggaactcttcagtaaatatggtaagactctgagtgtt
aaagtgatgacagaccccactggaaaatccaaaggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcagttgaagaaatgaatgggaaggatatcaatgggaaaatg
gtgtttgtaggccgagcacagaagaaggtggagcgccaggcagagctgaaaaggagattt
gaacagctaaaacaagagagaatcagccggtatcagggagttaacctatacattaaaaac
ctagatgacactatagatgatgaaaaactgaggaaggaattctcaccttttgggtcaata
acaagtgcaaaggtgatgctggaagatggacggagcaaagggtttggctttgtctgcttt
tcctctccagaggaagctacgaaagctgtgacagagatgaatggtcgaatagtgggctca
aagccactctatgttgctcttgcacaaaggaaagaagagcgaaaggctcatctaactaat
cagtacatgcagcgcattgctgggatgagagccttgccagccaacacaatcattaatcag
ttccagcctgctgctggcggttatttcatgcctgctgtgccccaggctcagagtagaccc
acttactatgcacccaatcagatggcacagatgagacccaacccacgctggcagcaaggg
ggaagacctcaaggcttccagggaatgccaaatgccatgcgccagtctggaccacggcca
acactgcgccatctggcccctgctggcactgctcctgtctctcgtggcctccctgtttct
gcccagcgagttggtgtttccactgcaggacagaacttggctcctcgtccacctgtagct
gctcctgctcccagagcagttcccccttataaatacgcctcaagtgtccgcagcccacat
ccacctgtacaacctttgcaggcacctcagcctgcagtacatgtgcagggacaggaacca
ctaacagcctccatgctggctgctgcccctcctcaggagcagaaacagatgctgggagaa
cgtttgttccctcttattcaagctatgcaccccagccttgcaggaaagatcacaggaatg
ttgctggagattgacaactcagagctgttgcacatgctggagtctccggagtctctccgg
tcaaaggtggaggaggctgttgcagtgttgcaggctcaccaagccaagaaagaagctgcc
cagaaggatgcaaagaagccaaatagcccctcccccgatgtcagctcaagatgtttgcag
attctgcactgtcctgcagggctcctcgccgtgcgacgcatcgcgtag
DBGET
integrated database retrieval system
