Phasianus colchicus (Ring-necked pheasant): 116230375
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Entry
116230375 CDS
T07365
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X1
KO
K06252
tenascin
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04510
Focal adhesion
pcoc04512
ECM-receptor interaction
pcoc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116230375 (TNR)
04518 Integrin signaling
116230375 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116230375 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcoc00536
]
116230375 (TNR)
Glycosaminoglycan binding proteins [BR:
pcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116230375 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
FN3_DSCAM-DSCAML_C
EGF_Tenascin
EGF_Teneurin
Fn3_PBP1
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Fn3_R-PTP-O
EGF_2
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
116230375
NCBI-ProteinID:
XP_031451354
Ensembl:
ENSPCLG00000007612
UniProt:
A0A669PM20
LinkDB
All DBs
Position
Unknown
AA seq
1355 aa
AA seq
DB search
MGTDSENPVLRNVLISFNLLLLGAVLKPFECRLEVTTEPAERPAVDEEGGLANCSPPIKE
QPMVFHHIYNINVPVDSCCSSMLRSSAEEVSSEDDRLAEYTEQTSDSDSQVTFTHRINLP
KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGRLDYTLPCSGHGNF
SLESCRCVCSEGWAGSNCSEPRCPRGCSSRGVCLEGQCVCDNDYGGEDCSQLRCPAGCGS
RGLCVDGECICEEGFGGDDCSQPRCPRDCSGRGHCDNGTCVCAEGYAGEDCGWLRCPNAC
SGRGVCQDGLCVCEDGYGGQDCSAVAPPENLRVTGVSDGSIELAWDSPGAATEYVVSYQP
AGPGGSQLQQRVPGDWSTITITELEPGVAYNISIYAVISDVLSSPVTTKVMTNLATPQGL
KFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKDQARSPPASDSISTLIDGPTQILVRDISDTVAFVEWTPPRARVDAILLKYGLA
DGEGGKTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESQPALTQFTTEIDAPKNLR
VGSRTPASLELTWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLMVTASTETSISLSWTKAMGPIDHYRVTFT
PASGMASEVTVSRDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNITWSDPSPPADHLVLTYSPRDEEAAQQLALDGTRRHASLTGLRPSTEYLV
SLVAVHGAVSSEPVTGSITTGMDAPKDLRVGNITQDSMVIYWSPPVAPFDHYRISYRAAE
GRTDSTAIGSDATEYSIRLLQPATKYEIGVKSVRGREESEVASITTYTAMDAPLGVTATN
ITPTEALLQWNPPLMDVESYVLVLTRHAVAGETILVDGINQEYQLTSLQPSTTYAVAMYA
TNGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGDIENYVLTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVRLQAAQNAVRSGFISTTFTTGGRVFTNPQDCAQHLM
NGDTLSGVYTISINGDLSQRVQVFCDMSTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaaacccagtcctgagaaacgtgctcatcagcttcaacttgctg
ctgctgggtgctgtcctgaagccgttcgagtgccggctggaggtgacaacagagccagcc
gagaggccggcagtggatgaggaggggggcctggccaactgcagcccacccatcaaagag
cagcccatggtcttccaccacatctacaacatcaatgtccccgtggacagctgctgctcc
tccatgctcaggtcttcggctgaggaggtgagttcagaagacgacaggctggcggagtac
acggagcagacctctgacagcgacagccaggtcaccttcacccacaggataaacttgccc
aagcaggcctgtaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatgctccgggaccaatgcaactccaattgctgccaa
gaaaatgcagccacaggacgcctggattacaccttaccgtgcagcggccacgggaacttc
agccttgagtcgtgccgctgcgtctgcagcgagggctgggcgggcagcaactgctcagaa
ccacgctgcccacggggctgctccagccgtggggtctgcctggagggtcagtgcgtgtgc
gacaacgactacggcggtgaggattgctcccagctccgctgccccgccggctgcggctcc
cgtgggctctgcgtggatggagaatgcatctgcgaggagggcttcggtggggatgactgc
tctcagccccgctgcccccgcgattgctcgggaaggggacactgtgacaacggcacctgc
gtgtgcgccgagggctatgctggggaggactgcgggtggctgcggtgtcccaacgcctgc
agtggacgaggcgtctgccaggatggcctctgcgtctgcgaggacggctacggagggcag
gactgctcggcagtcgctcctcctgaaaacctgcgtgtgacaggggtcagcgatggctcc
attgagctggcatgggacagccctggggcagccactgagtacgtggtatcataccagcca
gcggggccagggggatcccagctccagcagcgggtgcctggggactggagcaccatcacc
atcacagagctggagccaggcgttgcctacaacatcagcatctacgcagtcatcagcgat
gtcttgagcagccctgtcaccaccaaggtgatgaccaacttggccacgccgcaggggctg
aagttcaagaccatcacagagacaaccgtggaggtgcagtgggagcccttctccttccct
ttcgatggctgggagatcagcttcatccccaagaacaatgagggtggtgtgattgcccag
ctccccagcaccgtcaccaccttcaaccagacggggctgaagccaggagaggagtacacc
gtcaccgtggtggctctgaaggaccaagccaggagccccccggcctctgacagcatctcc
accctcatcgacggcccgacgcagatcctggtgcgggacatctccgacacggtggccttt
gtggagtggaccccgcctcgcgcccgggtggacgccatcctgctgaagtacgggctggcg
gacggggagggcgggaagaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcggcccggcgcccgctaccacctcgctgtcagcgccctccggggtgccaac
gagagccagccggccctcactcaattcaccacagagatcgatgcacccaagaacctacgg
gtgggctcacggacccctgccagcctcgagctcacctgggacaacagcgaggcagaggca
cacagctatagggtggtctacagcaccctggctggagagcactaccacgaggttctggtg
ccacgggacactggccccaccacccgggccactcttgcagatctggtgccagggacagaa
tatggcattgggatttcagccgtgatggacagccagcagagcgtgccagcgaccatgaat
gccaggaccgagcttgatagcccccgggacctcatggtgacagcttccacggagacatcc
atctcactgtcctggaccaaagccatgggtcccattgaccactaccgtgtcaccttcacc
cctgcctcggggatggcctctgaggtgacggtgtcccgtgacgagtcgcagctcactctc
tctgagctggagccagggacagagtataccatctccatcattgctgagaggggacgtcag
cagagcctggaggccaccgtggacgctttcacaggggtccggcccatcacgcagctgcac
ttctcccagctgacatcctcaagtgtgaacatcacgtggagtgatccatccccccctgca
gaccacctggtcctcacctacagcccccgggacgaggaggcagcacagcagctggcactt
gatggcacccgcaggcatgccagcctgacgggtctgcggccatccaccgagtacctggtg
tccctagtggctgtccatggtgcagtcagctctgagcccgtcacaggttccatcacgaca
gggatggatgcaccaaaggacctcagagtgggtaacatcacccaggactccatggtcatc
tattggagccctcctgttgctccctttgatcactacagaatatcctaccgtgctgctgaa
gggaggacagacagcacggccattggcagcgatgccaccgagtacagcatccgccttctg
cagcctgccaccaagtacgagattggagtgaagagtgtgcggggccgggaggagagtgag
gtggcctccatcaccacatacacagccatggatgccccgctgggtgtcaccgccaccaac
atcacccccacagaggcactgctgcagtggaacccgccgctgatggatgtggagagctat
gtcctcgtcctcacccgccacgcagttgcaggagaaacaattctggtggatggaatcaac
caggaataccagctgaccagccttcagcccagcaccacctacgcggttgccatgtatgcc
accaatgggcccctcaccagccagaccatcagcaccaacttcacaacccttttggatcct
ccaacaaacctgactgcaagcgaggtcacccgacggagtgcactgctctcctgggtgcct
cccgtgggagacatcgagaactacgtcctgacctacagatcaactgatggaagtcgcaag
gagctgattgtggatgctgaggacacgtggatccgcctggagggtctttctgagaccacc
gagtacacagtgcgcctgcaggctgcccaaaacgccgtgcggagcggcttcatctccacc
accttcaccacgggtggccgtgtcttcaccaaccctcaggactgtgcccagcacttgatg
aacggagacacgctgagcggtgtctacaccatctccatcaacggggacctcagccagcgg
gtgcaggtgttctgtgacatgagcacggacggcgggggctggattgtcttccaaaggcgg
cagaatgggctgaccgacttcttccgaaaatgggcagattaccgggtcggctttgggaac
ttggaggatgagttttggctgggcttggacaacatccacaagatcacatcgcagggacgc
tacgagctgcgcatagacatgagggatggccaggaagcagcatatgcctactatgacaaa
ttctccatcggcgactcccggagcctctacaagctgcggataggagactacaatggcact
tctggggactccctcacctaccaccagggccgccccttctccaccaaggacagagacaac
gacgtggccgtgaccaactgtgccatgtcctacaagggggcttggtggtataagaactgc
caccggaccaacctcaacggcaagtatggagagtccaggcacagtcagggaattaactgg
taccattggaaaggccacgagttctccatcccctttgtggaaatgaagatgcgaccttac
aaccaccgtaacatctctgggaggaagcgacggtccctacagctctga
DBGET
integrated database retrieval system
