Phasianus colchicus (Ring-necked pheasant): 116230899
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Entry
116230899 CDS
T07365
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116230899 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcoc04121
]
116230899 (TRIP12)
Enzymes [BR:
pcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116230899 (TRIP12)
Ubiquitin system [BR:
pcoc04121
]
Ubiquitin ligases (E3)
HECT type E3
116230899 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
116230899
NCBI-ProteinID:
XP_031452182
Ensembl:
ENSPCLG00000008052
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAAGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEDSERVSTSEKQKTGQVPKKDNSRGVKRSASPDY
SRTNSPSSAKKPKALQHAETSSESNKPHTKSKRRHLDQEQQKSTQLPSTSKAHTRKGGAA
GSSRSQKRKRTESTSCIKSRSAVESTGAEEKSAKSSKLASKSVTSAKAGCSTITDSSSSA
STSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEQSKTGGSSKF
DWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSL
RRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGA
AASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSG
ASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN
FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS
KAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQ
DKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRM
FSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICEL
MPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEI
SLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKED
PELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHI
ASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVC
TNGSGTLGTTTTISTGTATAATNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPART
AGVSGLARAASKDTISNNREKIKGWIKEQAHKFVDRYFSSENMDGSNPALNVLQRLCTAT
EQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLK
RFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGS
SFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVKLYS
LQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTS
PRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWYY
LYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGT
KYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWML
RQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALETLTMNGCSV
EDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFES
VFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFD
SEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSTIEIMREKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagcaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaagaagattcagaaagagtcagtacttcagaaaagcaaaaaacg
gggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagattac
agcaggaccaattctcctagctctgctaaaaaacctaaagcacttcaacacgccgaaact
tcctcggaaagtaacaagccacatactaaatccaagagaagacacttagaccaagaacag
cagaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgct
ggtagctcccgaagtcagaaaaggaaaaggacagagagtacgtcttgtataaagagtcgt
tcagcagttgaatcaactggcgctgaagagaagtcagcaaaatcctccaagctggcttca
aaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttcagct
tctacatcctcttcctcttctgctgttgcctctgcttcttccactgttcctcagggtgcc
agagtgaaacagggtaaggaccagaataaggctagacgttcacgttctgcgtccagccct
agtccaagaaggagcagcagggacaaagaacagagcaaaacaggtggctcttcaaagttt
gactgggctgctcgattcagtccaaaagttagtctccctaaaacaaaactgtctctacca
ggctcttctaagtcagagacctcaaaacctggaccttcaggactgcaggctaagctagca
agcctaagaaaatccacaaagaagcgcagtgaatcaccacctgctgagctccccagtttg
cggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcggcgaggctct
ggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgatcctgac
aacaaccaggatggagttaactcttcagctgcacgtacagatgaggctccccagggagct
gcagcttctagctctgttgctggggctgtaggtatgacaacatctggagaaagtgagtca
gatgactctgagatgggaagactacaagctctgttagaggctaggggtcttcctcctcac
ctgtttggccctcttggtcctcggatgtcgcaactcttccacaggacaattggaagtgga
gctagttctaaagcccagcagcttttacaaggtctccaagccactgatgaaagtcagcaa
ctacaggcagttattgagatgtgccagctgttggtcatgggaaatgaagaaacactggga
ggatttccagtcaagagtgttgtgccagctttgataacattgctgcagatggagcacaac
tttgacatcatgaaccatgcttgtcgagccttaacatacatgatggaagcacttcccaga
tcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttattcag
tgcattgatgtggcagagcaggcactgacagccctggagatgctatcgcgcaggcatagt
aaagccattctgcaggcaggtgggttggcagactgtttgctatatctggaattcttcagt
ataaatgcgcagaggaatgcactagctattgctgccaattgctgccagagtataacacct
gatgagtttcactttgtggcagactctttgccattgcttacacaaaggttaacccatcag
gacaaaaagtctgttgaaagcacttgtctctgttttgcacggctggtagacaatttccag
catgaggagaacttgctgcagcaggttgcttccaaggacttgttaacaaacatccagcaa
cttttggtagtgacacctcctatcctgagctcaggaatgttcatcatggtggtgcgcatg
ttttccttaatgtgttccaattgtccaacgcttgcagtccaacttatgaagcaaaacatt
gcagaaacacttcactttctactttgtggagcctcaaatgggagttgtcaagaacaaatt
gaccttgttccacgaagtcctcaagaactctatgagcttacttctcttatctgtgaactg
atgccttgtctgccaaaagaggggatatttgctgttgatactatgctaaagaaaggaaat
gcacaaaatacagatggtgcaatatggcagtggcgagatgacaggggtctctggcatccc
tataacaggattgatagtcgaataatagaggcagctcatcaggttggtgaggatgagata
agtctgtcgacacttggacgtgtctatactattgattttaactctatgcagcaaataaat
gaggatactggaacagcacgtgccattcagcggaaaccaaaccctttagccaatacaaac
actagtggacattcagaattgaagaaggatgatgctcgagcacaactaatgaaagaagac
ccagaattggcaaaatcctttatcaaaacactgtttggtgttctttatgaagtgtacagt
tcttcagctggacctgctgttagacacaagtgccttagagcaatacttagaataatttat
tttgctgatgctgaactcctgaaggatgtgctgaaaaaccatgctgtgtcaagtcatatt
gcctccatgctgtcaagtcaagaccttaagatagtagttggagccctgcagatggcagaa
atcttaatgcaaaagctacctgacatttttagtgtttacttcagaagagaaggagtgatg
catcaagtgaaaaacttagcagaatctgaggctttgctaacgagcccaccaaaagtatgc
actaatggatcaggaacgctgggtaccactacaacgataagtactggaacagccactgct
gccactaatgcagctgcagatttgggctctcccagcttacaacacagccgggaggattct
ttggatctaagcccacagggacgactgagtgatgttctaaagagaaaaagactgccaaaa
cgggggccaagaagaccaaaatattctcccccaagagatgatgacaaagtagacaatcaa
gcaaaaagtcctacaactactcaatctcctaaatcttccttcttagcaagtttaaatcct
aaaacatggggaagattaagtacacagtctaacagtaataatattgaaccagcacgaaca
gcaggtgtaagtggtcttgcaagagctgcttccaaggatacaatttccaataacagagaa
aaaattaagggttggattaaggagcaagcccataaattcgtagaccgttattttagttcg
gaaaacatggatggaagcaatcctgcactaaatgtattacagagactttgcactgcaact
gaacaacttaacctccaggttgatggtggaacagagtgccttgtagaaatccgtagcatt
gtctcggagtctgacgtctcctcatttgaaatccagcatagtggatttgtgaaacaactg
ctgctttatttgacatctaaaagtgagaaagatgctgtaagcagggatatcagattgaaa
agatttcttcatgtatttttctcctctccacttcctggagaagaacccctcggaagatta
gagccattagaaaatgcacctttgttggcattagtccataaaatgaacaattgcctcagt
cagatggagcagtttccagtgaaagtgcatgacttccccagtggaaatggaacagggagc
agtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcagttaaaa
tgccagctgcaaagacatccagactgtgctaatgtgaaacagtggaagggtggacctgtg
aagattgatcctctggctttggttcaagccattgaaagatatcttgtcgttagaggttat
ggaagagttagagaagatgatgaggatagtgatgatgatgggtcagatgaagaaatagat
gaatctttggctgctcaattcttaaattcagggaatgtgagacacagattgcagttttac
attggggatcacttgctaccatataatatgactgtgtatcaagcagttaagctgtacagt
ttgcaagctgaggaggagagggaatcgactgatgatgaaagcaacccattaggaagagct
gggatttggacaaaaacacataccatttggtacaaacctgtgcgggaggatgaagatggt
aacaaagactgcgttggtggcaaaagaggaagagctcaaactgctcccacaaaaacctcg
cctaggaattctaagaagcatgatgaattgtggcatgatggtgtatgcccttcagtattg
aatcctttagaagtttacctcatatctactcctcctgaaaacataacatttgaagatcct
tcattagatgttattcttcttttgagagttttacatgctatcagtcgatactggtattat
ttgtatgataatgcaatatgcaaggagattattccaacttcagaatttatcaacagtaaa
ctgacagcaaaagcaaacagacagcttcaagatccactggtgattatgacaggaaacata
ccaacttggctgacagaacttggaaaaacatgcccatttttctttccatttgatacccga
caaatgctgttttatgtaactgcttttgatcgtgatcgagccatgcaaagactactggat
actaatccagaaatcaatcaatcagattctcaggatagcagagtggcaccacgactggac
aggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcag
gatctaggcagttcaagagccatgttggaaatccagtatgagaacgaagttggcacaggc
ctgggccctacactagagttctatgcacttgtatctcaggaactacagagagcagactta
ggcctttggaggggagaagaagtaactttagccaatccaaaaggaagccaagaaggtacc
aagtatattcataatctccaaggcctttttgcacttccttttggtagaacagccaagcca
gctcacattgcaaaagttaaaatgaagttccgctttctgggaaaactaatggccaaggca
atcatggattttagactggtggatcttcctcttggacttcctttttataaatggatgtta
cgccaggaaacttctttgacgtcgcatgacttgttcagtattgatccagttgtagccaaa
tcaatatatcaccttgaagatattgtaagacaaaagaaaagacttgagcaggacaaaaca
cagaccaaagaaagtctacagtatgcattggaaactctgactatgaatggctgctcagtg
gaggatctagggctggatttcacacttcctggatttcctaatatagagctgaaaaaaggg
ggaaaagatacaccggtcaccatccacaatttagaggagtatctcagattggttatattc
tgggcacttaatgaaggtgttgccagacagtttgattctttcagagatggatttgaatca
gtcttccccctcagtcatcttcagtacttctatcctgaggagttggagcaactcttatgt
ggcagcaaaacagacacgtgggatgccaagaccttaatggaatgttgcaggccagatcac
ggttatacacatgacagtcgagcagtgaagtatctctttgaaattctcagtagctttgac
agtgagcagcagagactgtttcttcagtttgtgactggtagtcccaggctgccagtagga
ggctttcgaagtttgaatcctccactgacaattgtacggaagacatttgagtctacagag
aatccagatgacttcttgccctcagtaatgacttgtgtgaactatctcaaattgccggac
tattcaactattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcagcag
tcattccatctttcctga
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integrated database retrieval system
