Phasianus colchicus (Ring-necked pheasant): 116231032
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Entry
116231032 CDS
T07365
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pcoc
Phasianus colchicus (Ring-necked pheasant)
Pathway
pcoc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116231032 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcoc04131
]
116231032 (VPS8)
Membrane trafficking [BR:
pcoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116231032 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
zf-RING_11
zf_RING_Vps8_fungal
TPR_Vps41
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR5
Beta-prop_WDR3_1st
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
116231032
NCBI-ProteinID:
XP_031452434
Ensembl:
ENSPCLG00000008474
LinkDB
All DBs
Position
Unknown
AA seq
1489 aa
AA seq
DB search
MISFPLPAGSRPRRSSLQSLSRRTAAAAHFPINRSAPSPPPLGYRRAAAPLTAAGGGRPC
GAAPARSGGGSGRGFESRRRRPASPTASRGPAMDAAPEDGLVGTEAEPDGLPCPEPPASR
LSAAELDRELDSRSELIDDKEFDIPQVDTPPTLESILNETDDEEESFVLEDPFLLNIDNT
DTHSYDTSSVASSDSGDRTHLKRKKKLPDSLSLHGSVIRLSLLKGISAQIVSAADKVDAG
LPTAIAASNLIAVGTSHGLALIFDQNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCG
FAKGQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFKRVM
GVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHPITQYSLLAMASLTKILVIGLKPSLKV
WMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAFCRGDVVHFLLVKRDDTGAIHVTKQKQ
LHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQTQEELETIEIPEVQLVYNSSHFKSLAT
GGNVSEALALVGEKACYQSISSCGGHIFYLGTKSVHVMTLRSWRERIDHLLKQERLTDAL
ALAWSFYEGKAKAVVGLSGDTSKRKAVIADRMVEILLHYADRTLKKCPDQGKIQVMEQHF
QDVVPVIVDYCLLLQRTDLLFNQIYDKMSENSVAKGIFLECLEPYILSDKLMGMTAQVMK
DLLLHFQDKNRLENMEACIVHMDITSLDIQQVVLLCWENHLYDAMIYVYNSGMNDFISPM
EKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQIFE
FLIRLHSTEGSVDEEVYPHIRTLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILL
KVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQ
VLLELLQAGGIVQFEESRLIQMAEKAEFYQICEFMYERQLRYDKIIDCYLRDPVRKEEVF
NYIHNILSMPGYSAEEKQAVWKKALEHIEELLLLSPCKAADLVAIHFTEQIESIIANLQD
QFLLFQFLRSLLDPREGINQDLLHLPPHITEQFIELLCQHSPDHVLETLKVLEYCRLEET
IQITQKHQLHEASSYLLEKKGDIHGAFRVMLERLQSKLLMLTQDDGGSAELPLLESIEDT
LMKTIALCQRNSHNLNQQQREALWFPLLEAMMSPQKLSGSSQYRYAESLKSLTMQVLNNM
AAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYEQTLLETTTNLLNHDLHWSL
CNLRASVTRGLTPKQDYCCICLQQYKRRQESADEIIVFSCGHLYHSLCLLSKECGAVSKD
VMRWMCYKCNSSNKGGKLSENFSELKKGSGTSLAQTGSESALDPQQIQAFDQLCRLNRGT
SRLALLTELSRGGEKHGLLSVSHGDSAASSVFQNETFQLHLAPPPLMDD
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgatttctttccctctccccgcaggctcacgtcctcgacgctcctcactccagtctctc
agccgccgtaccgcggcagccgcgcacttcccaataaatcgctccgctccatcgcctccg
cccctcggttaccgccgcgctgcggcccctttaacggcggcggggggagggcggccgtgc
ggtgctgcgcctgcgcggagcgggggcggctccggacgcgggttcgagtcccggcgccgc
cggcctgctagccccaccgcgagccgcggcccggccatggacgcggcgccggaggacggc
ctcgtgggaaccgaggctgagccggacgggctgccctgcccggagccgcccgcgtcccgc
ctgagcgcggcggaactcgaccgcgagctggactcccgcagcgagctgatcgatgacaaa
gagttcgacatccctcaagtcgataccccgccaacgctggagagcatcctgaacgagact
gatgatgaagaagagtctttcgttttggaagatccctttctcttgaacattgataacaca
gatacacactcctatgacacatcttctgtagcaagctctgacagtggggacaggacacac
ctgaaaaggaagaaaaaactcccggattctctctctctgcacggatcagttataagactc
tcgcttctgaaagggatttctgcccaaattgtatctgcagcagacaaagtggatgctggt
ttgcctactgcaattgcagcatcaaatctgatagcagtggggacgtctcatgggctagcc
ctgatttttgatcaaaaccaggctctacggctgtgtctgggcagcactgctgttggggct
cagtatggagctatctctgctctcagcatcaacaacgactgctccagactcctgtgtggc
tttgcaaaaggacagatcacaatgtgggatctggccagtgggaagctgctacgatcaata
acagatgctcaccccccaggaacagccattttgcacattaagtttacagatgacccgaca
cttgcaatttgcaatgacagcggaggctccgtatttgaactctcatttaagagggttatg
ggagtgagaacgtgtgaatctcgatgtctcttcagtggctccaagggggaggtttgttgt
attgaaccattacatgcaaaggttgaactgagagaccatcctatcacccaatattcactg
ctggccatggcctccctaacaaagatactggttattggcctgaagccatctttgaaagtg
tggatgacctttccctacggtcgtatggacccttcgagtgtccccctcctggcgtggcac
tttgtggctgtgcagaactcagtgaaccccatgcttgccttttgtagaggcgacgtcgtt
cattttcttctggtgaagagggatgatactggggcaatacatgtcactaagcaaaagcag
ctccatcttcactatgacctcatcaactttacttggataaactcacgaacagcagtgctt
ctggacagtgtggagaagctgcatgtcatagatcggcagacacaggaggagttggagacc
atagagattccagaagttcagctggtctacaacagcagccacttcaagtccctggctaca
ggaggcaatgtcagcgaggcgctggcattggttggagagaaagcttgttaccagtccatc
agcagctgtggtggccatatcttctacctgggaactaagtcagttcacgtcatgacattg
aggagctggagagagagaattgatcaccttctgaaacaagagcgtctcactgatgccctg
gctcttgcttggtccttttatgaagggaaagcaaaggctgtagtaggcttgtctggggac
acgagcaagcggaaagctgtcattgcagacagaatggttgagatccttctccattatgct
gatcggactttgaagaaatgccctgaccaaggaaaaatccaggttatggagcagcacttt
caggatgtggtgcctgtcatagttgattactgccttttgctccagcgcacagatctatta
tttaaccagatctacgataagatgagtgagaattccgtagccaaaggaatctttctggag
tgcttggagccatatatcttaagtgataagctgatgggaatgacagctcaagtgatgaaa
gacttgctccttcacttccaagacaagaacaggttggaaaacatggaagcctgcattgtg
catatggatatcaccagcctggacatacaacaggtggtccttctgtgctgggaaaaccat
ctctatgatgccatgatctacgtttacaacagcggaatgaatgacttcatcagtcccatg
gagaagctgttcaaagtcatcgctcctccactgaatgctgggaagtctctcacagatgag
caggtggtaatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgtgct
tatccattgggtgatattcctgaagatctggtacctctggttaaaaatcagatctttgag
tttctcatccggttgcattcaacagagggatctgtggatgaggaggtctaccctcacatt
cgtaccttgctgcactttgacactcgggaattccttaatgttcttgctttgacttttgaa
gactttaagaatgacaagcaagctgtggaatatcaacagcgcattgtggacatacttctg
aaagtcatggtagagaattctgacttcaccccatcacaagttggctgtctctttactttc
cttgcccgtcagctggccaagcccaacaacacactgtttgtgaacagaacgctttttgat
caggtccttgaatttctttgcagtccggatgatgactcccggcattcagagaggcagcag
gtcctgttagaactgctgcaggcaggagggatagtgcaatttgaagagagtcgtcttatc
caaatggcagaaaaagctgaattctatcagatttgtgagttcatgtatgaacgacagctt
cgctacgacaaaatcattgactgctacctgcgtgatccagtgagaaaggaagaagttttc
aactatattcacaacatcctgtccatgcctggctacagtgctgaagaaaagcaggcagtg
tggaagaaagctttggaacatatagaggagttactgctactcagcccgtgtaaagcagct
gacttggtggccatccacttcactgagcagattgagagcatcattgcaaaccttcaggac
cagttcttactcttccaatttctaaggagtctgcttgatccgagagaaggcatcaaccaa
gatctcctgcacctaccaccccacatcacggagcagttcatcgagctgctgtgtcaacac
agccctgaccacgttctggagacactaaaagtcctggagtactgcaggctggaggaaacc
atccagataacccagaaacatcagctccatgaagcttcctcatatttactggagaagaaa
ggagatatccatggtgcctttcgggttatgctcgagcgattgcagagcaagctgctgatg
cttacacaagatgatggaggttcagcagaactccccttgctcgaaagcattgaagatacc
ctaatgaaaacaattgccctttgccagaggaattcacacaacttaaaccagcaacagcga
gaggccctctggtttcccctgctggaggctatgatgtccccacagaaattgtctggctct
tcacagtaccgatatgctgaatccttgaagagtttgacgatgcaagtgctgaacaacatg
gctgcatttattgctcttccttcaatcctgcagagaattctacaggatccagtttatgga
aaagggaaacttggagaaattcaaggtctcgtcttgggaatgctggacacatttaactat
gaacaaactcttttagagacgaccacaaaccttctaaaccacgatctccactggtccctg
tgtaacctaagagcttctgtcactagagggcttaccccaaagcaggattactgctgcatt
tgtctacagcagtacaaaaggaggcaagaaagcgctgatgaaatcattgtgttcagctgt
ggccacttataccattccctgtgcctgctcagtaaggagtgcggggcagtaagcaaagat
gtgatgcggtggatgtgctataaatgcaactcgagcaacaagggtggaaaactgagcgag
aacttttcagagctgaaaaaaggaagtggaacctccttggcacagacagggtcagagtct
gcattggatcctcagcaaatccaggcctttgaccaactctgccgtctgaaccgtgggacc
tcccggttagctctcctgactgaactgtcccgcggtggggagaagcatgggctgctcagt
gtttcccacggggactctgctgccagcagcgtcttccagaatgagaccttccagctgcac
ctggcccctccaccactgatggatgattag
DBGET
integrated database retrieval system
